BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0024.p (700 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_834884.1| Phage infection protein [Bacillus cereus ATCC 1... 378 e-103 ref|NP_981626.1| conserved hypothetical protein [Bacillus cereus... 377 e-103 ref|NP_653666.1| hypothetical protein predicted by GeneMark [Bac... 373 e-102 ref|NP_977500.1| conserved hypothetical protein [Bacillus cereus... 263 1e-68 ref|NP_830864.1| Phage infection protein [Bacillus cereus ATCC 1... 262 3e-68 >ref|NP_834884.1| Phage infection protein [Bacillus cereus ATCC 14579] gb|AAP12085.1| Phage infection protein [Bacillus cereus ATCC 14579] Length = 666 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 227/695 (32%), Positives = 367/695 (52%), Gaps = 42/695 (6%) Query: 4 MKVITVFLKDMKIXXXXXXXXXXXXGVAALPMLYSSFLVDASWDPYGNTGKLPVAVVNLD 63 MK I + KD K + +P++YS F + WDPYG KLPVA+VNLD Sbjct: 1 MKGIQLIFKDWKAMWHHKHGRIALIFLLIVPLIYSGFFLAGYWDPYGRLDKLPVAIVNLD 60 Query: 64 KGAVYEGKSMEVGKDFVDELKDNDDFKWNFVNAAEAEDGMAHNRYYMTITIPANFSENAT 123 KGA + K++ G DFV LK+N + ++F++ A++G+ ++YYM +TIP +FS+ + Sbjct: 61 KGAAMDEKTIRAGDDFVKNLKENKELAFHFISEKNADEGLKEDKYYMVVTIPEDFSKKVS 120 Query: 124 TLTAEHPVQAEIVFEPNSDYNFVAGQIGNSAMSKLKAKLSTQITAAYTRSMFEQVDTISQ 183 TL E P A++ ++ N NFVA QIG +A+ +K K+S IT +YT +F + ++Q Sbjct: 121 TLMDEKPEPAQLQYKVNPGKNFVAAQIGTTAVENMKTKISNSITKSYTEGVFSKFQDLAQ 180 Query: 184 GLGDAGEGATKLKDGAGKLQGGLATLKTNLNKLASGTTELQSGLKLLYNGAXXXXXXXXX 243 GL DA GA KL +G + + G L +++L+ GT++++ G + L Sbjct: 181 GLNDASNGAGKLHEGTTEARNGANQLADGIHRLSDGTSKVKEGSEKL------------- 227 Query: 244 XXXXXXXXXXXXXXXVKAEQQLQAGAVQSQKGAAQLNEGLLASKTGSSQLKEGLTASEAA 303 +L GA G L +G ++G S+L G Sbjct: 228 --------ASSKSALTDGANELSQGATSLHSGMELLTQGQKTLQSGVSELSAGTNEWVNG 279 Query: 304 SSQLAAG-------ADQVAKGLEQMMAATPGLQENEQFQQLLAASRQVAAGSQQLHTGQE 356 S +LA G A+ V + LE + P +Q++ FQ+++A S +A + L+ Q+ Sbjct: 280 SEKLAEGQVKADNAANSVKQQLEDYVKNHPEVQQDPAFQKIVATSDGLAKATNNLNNSQQ 339 Query: 357 QLLAGSTKLDSXXXXXXXXXXXXSDGGSQLATGLQTFGQKLNQXXXXXXXXXXXXXXXXX 416 QL G+ K+ +DG ++ G+ TFG KLN+ Sbjct: 340 QLTQGAKKI--------------ADGQHKIEEGMNTFGVKLNEATAGTKKIADGASNLAD 385 Query: 417 XXVQLGQGLTKLAGGVDGLSEGAVKLKDGAGELNDGAGKLASGSGELAEKLTDAAADTSS 476 + G G T L GV+ L+ G +L +GAG+L +G KL G+ EL+ KL + A + Sbjct: 386 GFTKWGNGFTSLQEGVNQLASGGTELNNGAGKLTNGLVKLDDGAKELSTKLGEGAEKIAD 445 Query: 477 VKSGDDTVSMFAEPVKLTEKTDHKLDHYGLGIAPYFLSLALFVGALVFSTVFSLRDSNVP 536 V++ D +MF+EPV+L + T + +YG GIAPYFLSLA +VG ++ S + L Sbjct: 446 VRNDDARNTMFSEPVQLVKSTVSDVPNYGSGIAPYFLSLAFYVGGIMASNILPLGRRQNM 505 Query: 537 GASPMGRFLSRTLTFVMVSILQSLLADIVLLYGLKLEVQSVPLFFLFTLIVSFSFTMIVQ 596 S F+++ ++ ++Q+LL D+V+L +KLEV SVPLF L ++++SF+F + Sbjct: 506 KVSGTVHFINKLGLVYLIGLIQALLVDVVVLGVMKLEVASVPLFVLSSIVISFTFMTFIL 565 Query: 597 ALVTWLDNPGRFLAIVLMIFQLTSSAGTFPLEMLPGWMQKVNPWLPMTHSIVGYKAIIGS 656 LVT G+FLA+ L++ QL +S GTFP E+ + K+ +LPM+HS+ G + +I Sbjct: 566 MLVTVFGLVGKFLAVTLLVLQLATSGGTFPGELNIAVLSKIGQFLPMSHSLRGLQDVISL 625 Query: 657 GDYALMREQIVYLLIYAVIFLALTFLYFARQNKRT 691 GD++ ++ QI+ LL Y V+ + ++ Q++ T Sbjct: 626 GDWSQLQMQILILLCYLVVAGGIAWITSHIQHRET 660 >ref|NP_981626.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gb|AAS44234.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 666 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 228/704 (32%), Positives = 373/704 (52%), Gaps = 56/704 (7%) Query: 4 MKVITVFLKDMKIXXXXXXXXXXXXGVAALPMLYSSFLVDASWDPYGNTGKLPVAVVNLD 63 MK I + KD K + +P++YS F + WDPYG KLPVA+VNLD Sbjct: 1 MKGIQLVFKDWKAMWHHKHGRIALIFLLIVPLIYSGFFLAGYWDPYGKLDKLPVAIVNLD 60 Query: 64 KGAVYEGKSMEVGKDFVDELKDNDDFKWNFVNAAEAEDGMAHNRYYMTITIPANFSENAT 123 KGA + K + G DFV LK+N + ++FV+ AE+G+ ++YYM +TIP +FS+ + Sbjct: 61 KGAAMDEKIIRAGDDFVKNLKENKELAFHFVSEKNAEEGLKEDKYYMVVTIPEDFSKKVS 120 Query: 124 TLTAEHPVQAEIVFEPNSDYNFVAGQIGNSAMSKLKAKLSTQITAAYTRSMFEQVDTISQ 183 TL E P A++ ++ N NFVA QIG +A+ +K K+S IT +YT +F + ++Q Sbjct: 121 TLMDEKPEPAQLQYKVNPGKNFVAAQIGTTAVENMKTKISNSITKSYTEGVFSKFQDLAQ 180 Query: 184 GLGDAGEGATKLKDGAGKLQGGLATLKTNLNKLASGTTELQSGLKLLYNGAXXXXXXXXX 243 GL DA GA KL +G + G L +++L+ GT++++ G + L Sbjct: 181 GLSDASNGAGKLHEGTTDARNGANQLADGIHRLSDGTSKVKEGSEKL------------- 227 Query: 244 XXXXXXXXXXXXXXXVKAEQQLQAGAVQSQKGAAQLNEGLLASKTGSSQLKEGLTASEAA 303 ++ L GA + +GA L+ G+ G L+ G++ A Sbjct: 228 ---------------ASSKSALTDGANELSQGATSLHSGMELLTQGEKHLQSGISELSAG 272 Query: 304 SSQLAAGADQVAKG--------------LEQMMAATPGLQENEQFQQLLAASRQVAAGSQ 349 +++ G++++A+G LE+ + + P +Q++ FQ+++A S +A + Sbjct: 273 TNEWVNGSEKLAEGQAKADNAANSVKQQLEEYVKSHPEVQQDPAFQKIIATSNGLAQATN 332 Query: 350 QLHTGQEQLLAGSTKLDSXXXXXXXXXXXXSDGGSQLATGLQTFGQKLNQXXXXXXXXXX 409 L+ Q+QL G+ KL +DG ++ G+ TFG KLN+ Sbjct: 333 TLNNSQKQLTQGAQKL--------------ADGQHKVEEGMNTFGVKLNEATAGTKKIAD 378 Query: 410 XXXXXXXXXVQLGQGLTKLAGGVDGLSEGAVKLKDGAGELNDGAGKLASGSGELAEKLTD 469 + G G T L GV+ L+ G +L GA +L +G KL G+ EL+ KL + Sbjct: 379 GATNLASGFTKWGTGFTSLQEGVNQLASGGTELNHGADQLTNGLVKLDDGAKELSTKLGE 438 Query: 470 AAADTSSVKSGDDTVSMFAEPVKLTEKTDHKLDHYGLGIAPYFLSLALFVGALVFSTVFS 529 A + V++ D +MF+EPV+L + T + +YG GIAPYFLSLA +VG ++ S + Sbjct: 439 GAEKIADVRNDDARNTMFSEPVQLVKSTVSDVPNYGSGIAPYFLSLAFYVGGIMASNILP 498 Query: 530 LRDSNVPGASPMGRFLSRTLTFVMVSILQSLLADIVLLYGLKLEVQSVPLFFLFTLIVSF 589 L S F+++ ++ ++Q+LL D+V+L +KLEV SVPLF L ++++SF Sbjct: 499 LGRRQNMKVSGTVHFINKLGLVYVIGLIQALLVDVVVLGVMKLEVASVPLFVLSSIVISF 558 Query: 590 SFTMIVQALVTWLDNPGRFLAIVLMIFQLTSSAGTFPLEMLPGWMQKVNPWLPMTHSIVG 649 +F + LVT G+FLA+ L++ QL +S GTFP E+ + K+ +LPM+HS+ G Sbjct: 559 TFMTFILMLVTVFGLVGKFLAVTLLVLQLATSGGTFPGELNIAVLSKIGQFLPMSHSLRG 618 Query: 650 YKAIIGSGDYALMREQIVYLLIYAVIFLALTFLYFARQNKRTAA 693 + +I GD++ ++ QI+ LL Y V+ + ++ Q++ T A Sbjct: 619 LQDVISLGDWSQLQMQILILLCYLVVAGGIAWITSHIQHRETNA 662 >ref|NP_653666.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_847621.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gb|AAP29107.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 666 Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust. Identities = 224/688 (32%), Positives = 366/688 (53%), Gaps = 28/688 (4%) Query: 4 MKVITVFLKDMKIXXXXXXXXXXXXGVAALPMLYSSFLVDASWDPYGNTGKLPVAVVNLD 63 MK I + KD K + +P++YS F + WDPYG KLPVA++NLD Sbjct: 1 MKGIQLIFKDWKAMWHHKHGRIALIFLLIVPLIYSGFFLAGYWDPYGRLDKLPVAIINLD 60 Query: 64 KGAVYEGKSMEVGKDFVDELKDNDDFKWNFVNAAEAEDGMAHNRYYMTITIPANFSENAT 123 KGA + K++ G DFV LK+N + ++FV+ A++G+ ++YYM +TIP +FS+ + Sbjct: 61 KGAAMDEKTIRAGDDFVKNLKENKELAFHFVSEKNADEGLKEDKYYMVVTIPEDFSKKVS 120 Query: 124 TLTAEHPVQAEIVFEPNSDYNFVAGQIGNSAMSKLKAKLSTQITAAYTRSMFEQVDTISQ 183 TL E P A++ ++ N NFVA QIG +A+ +K K+S IT +YT +F + ++Q Sbjct: 121 TLMDEKPEPAQLQYKVNPGKNFVAAQIGTTAVENMKTKISNSITKSYTEGVFSKFQDLAQ 180 Query: 184 GLGDAGEGATKLKDGAGKLQGGLATLKTNLNKLASGTTELQSGLKLLYNGAXXXXXXXXX 243 GL DA GA KL +G + + G L +++L+ GT++++ L + Sbjct: 181 GLNDASHGAGKLHEGTTEARNGANQLADGIHRLSDGTSKVKEESDKLASSQSALTDGANG 240 Query: 244 XXXXXXXXXXXXXXXVKAEQQLQAGAVQSQKGAAQLNEGLLASKTGSSQLKEGLTASEAA 303 + E+ LQ+G ++L+ G GS +L EG ++ A Sbjct: 241 LSQGATSLHSGMELLTQGEKTLQSGV-------SELSAGTNEWVNGSEKLAEGQVKADNA 293 Query: 304 SSQLAAGADQVAKGLEQMMAATPGLQENEQFQQLLAASRQVAAGSQQLHTGQEQLLAGST 363 A+ V + LE+ + + P +Q++ FQ+++A S +A + L+ Q+QL G+ Sbjct: 294 -------ANSVKQQLEEYVKSHPEVQQDPAFQKIIATSNGLAQATNTLNNSQQQLTQGAK 346 Query: 364 KLDSXXXXXXXXXXXXSDGGSQLATGLQTFGQKLNQXXXXXXXXXXXXXXXXXXXVQLGQ 423 KL +DG ++ G+ TFG KLN+ + G Sbjct: 347 KL--------------ADGQHKIEEGINTFGVKLNEATAGTKKIADGAANLASGFTKWGT 392 Query: 424 GLTKLAGGVDGLSEGAVKLKDGAGELNDGAGKLASGSGELAEKLTDAAADTSSVKSGDDT 483 G T L GV+ L+ G +L G +L +G KL G+ EL+ KL + AA + V++ D Sbjct: 393 GFTSLQEGVNQLASGGTELNHGVDQLTNGLVKLDDGAKELSTKLGEGAAKIADVRNDDAR 452 Query: 484 VSMFAEPVKLTEKTDHKLDHYGLGIAPYFLSLALFVGALVFSTVFSLRDSNVPGASPMGR 543 +MF+EPV+L + T +YG GIAPYFLSLA +VG ++ S + L S Sbjct: 453 NTMFSEPVQLVKSTVSDAPNYGSGIAPYFLSLAFYVGGIMASNILPLGRRQNMKVSGTVH 512 Query: 544 FLSRTLTFVMVSILQSLLADIVLLYGLKLEVQSVPLFFLFTLIVSFSFTMIVQALVTWLD 603 F+++ ++ ++Q+LL D+V+L +KLEV SVPLF L ++++SF+F + LVT Sbjct: 513 FINKLGLVYVIGLIQALLVDVVVLGVMKLEVASVPLFVLSSIVISFTFMTFILMLVTVFG 572 Query: 604 NPGRFLAIVLMIFQLTSSAGTFPLEMLPGWMQKVNPWLPMTHSIVGYKAIIGSGDYALMR 663 G+FLA+ L++ QL +S GTFP E+ + K+ +LPM+HS+ G + +I GD++ ++ Sbjct: 573 LVGKFLAVTLLVLQLATSGGTFPGELNIAVLSKIGQFLPMSHSLRGLQDVISLGDWSQLQ 632 Query: 664 EQIVYLLIYAVIFLALTFLYFARQNKRT 691 QI+ LL Y V+ + ++ Q++ T Sbjct: 633 MQILILLCYLVVAGGIAWITSHIQHRET 660 >ref|NP_977500.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gb|AAS40108.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 911 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 160/420 (38%), Positives = 231/420 (55%), Gaps = 46/420 (10%) Query: 279 LNEGLLASKTGSSQLKEGLTASEAASSQLAAGADQVAKGLEQMMAATPGLQENEQFQQLL 338 L EGL +K G+ +LK+G +QL +G+ +V GL Q+ +E QL Sbjct: 517 LGEGLGNAKIGADKLKDGSVQLIDGVTQLQSGSGKVTAGLGQL---------SEGANQLA 567 Query: 339 AASRQV-------AAGSQQLHTGQEQLLAGSTKLDSXXXXXXXXXXXXSDGGSQLATGLQ 391 S QV + G+ Q+ G QL GS+++ +DG +Q+ TGL Sbjct: 568 DGSSQVTGGLGTLSVGANQMAGGINQLADGSSQVTGGLGSLSVGVSKLADGSNQVTTGLG 627 Query: 392 TFGQKLNQXXXXXXXXXXXXXXXXXXXVQLGQGLTKLAGGVDGLSEGAVKLKDGAGELND 451 L GL K++ G L +G KL DG+G++ D Sbjct: 628 ----------------------------DLNGGLNKMSTGSTQLIDGVNKLADGSGKVTD 659 Query: 452 GAGKLASGSGELAEKLTDAAADTSSVKSGDDTVSMFAEPVKLTEKTDHKLDHYGLGIAPY 511 G K+ GSGELAEKL + A T VK D T MFA PVK+ + ++ +YG G PY Sbjct: 660 GLVKVNDGSGELAEKLGEGAEKTGEVKGTDKTYDMFASPVKVKTEKMAEVPNYGTGFTPY 719 Query: 512 FLSLALFVGALVFSTVFSLRDS-NVPGASPMGRFLSRTLTFVMVSILQSLLADIVLLYGL 570 FLSL LFVGAL+ S V+ LRD+ VP S F+S+ + V I+Q+++ADI+LL+GL Sbjct: 720 FLSLGLFVGALLLSIVYPLRDTVGVP-KSGFSWFISKFGVLLSVGIIQAVVADIILLFGL 778 Query: 571 KLEVQSVPLFFLFTLIVSFSFTMIVQALVTWLDNPGRFLAIVLMIFQLTSSAGTFPLEML 630 +EVQS+P F LF+++ S +F ++Q LVT + GRF+AI+ +I QLT+SAGTFPLE++ Sbjct: 779 GVEVQSIPYFILFSIVTSLAFIALIQCLVTAFGDAGRFIAIITLIIQLTTSAGTFPLELI 838 Query: 631 PGWMQKVNPWLPMTHSIVGYKAIIGSGDYALMREQIVYLLIYAVIFLALTFLYFARQNKR 690 P ++Q N WLPMT+S+ G KA++ SGD+ M + I L+I+ V+ T +KR Sbjct: 839 PKFLQPFNAWLPMTYSVSGLKAVVSSGDFNFMWQNIGVLMIFIVVLSLGTIASLTWMHKR 898 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 112/336 (33%), Positives = 173/336 (51%), Gaps = 18/336 (5%) Query: 33 LPMLYSSFLVDASWDPYGNTGKLPVAVVNLDKGAVYEGKSMEVGKDFVDELKDNDDFKWN 92 +P+LY+ + A WDPY LPVAVVNLDKGAV++GK +EVGK VD LKDN FKW Sbjct: 30 VPILYAGMFLWAFWDPYKQLDDLPVAVVNLDKGAVFDGKPIEVGKGLVDNLKDNTSFKWE 89 Query: 93 FVNAAEAEDGMAHNRYYMTITIPANFSENATTLTAEHPVQAEIVFEPNSDYNFVAGQIGN 152 FV+ EA+ GM +YYM + IP +FS NATTL + P + + PN NF++ QIG Sbjct: 90 FVSEKEAKRGMEGRKYYMLVRIPDDFSSNATTLLKDDPKPLNLEYIPNESLNFLSSQIGG 149 Query: 153 SAMSKLKAKLSTQITAAYTRSMFEQVDTISQGLGDAGEGATKLKDGAGKLQGGLATLKTN 212 +A+ K+K ++S+ +T Y MF+ + +S+GL D EGA KL DG+ +L G + + Sbjct: 150 TAIEKIKGEVSSTLTKTYAEKMFDSIQDVSKGLADGAEGANKLHDGSSELHDGSSKVTDG 209 Query: 213 LNKLASGTTELQSGLKLLYNGAXXXXXXXXXXXX--XXXXXXXXXXXXVKAEQQLQAGAV 270 L+ L + E++ G++ L +G+ V ++ AG Sbjct: 210 LHTLQGKSGEMKDGVQKLADGSNKLVDGSGKVTVGLNTLNSKTGIGKLVDGSGKVTAGLN 269 Query: 271 QSQKGAAQLNEGLLASKTGSSQLKEGLTASEAASSQLAAGADQVAKGLEQMMAATPGLQE 330 +L G+ GS ++ GL + +L G+++V GL Sbjct: 270 TLNSKTGELQTGIGKLVDGSGKVTAGLNTLNSKMGELRDGSEKVTGGL------------ 317 Query: 331 NEQFQQLLAASRQVAAGSQQLHTGQEQLLAGSTKLD 366 +L++ S ++ G+ L G E+L+ G +L+ Sbjct: 318 ----NKLVSKSGELKTGTTDLSNGMEKLVEGQNQLE 349 >ref|NP_830864.1| Phage infection protein [Bacillus cereus ATCC 14579] gb|AAP08065.1| Phage infection protein [Bacillus cereus ATCC 14579] Length = 1034 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 165/434 (38%), Positives = 239/434 (55%), Gaps = 22/434 (5%) Query: 264 QLQAGAVQSQKGAAQLNEGLLASKTGSSQLKEGLTASEAASSQLAAGADQVAKGLEQMMA 323 +L +G + + GA +L+ GL TGS+QL G+ +QLA G+ +V GLE++ Sbjct: 611 KLVSGVNELKNGAGKLSGGLGELSTGSNQLITGV-------NQLADGSGKVTNGLEKL-- 661 Query: 324 ATPGLQENEQFQQLLAASRQVAAGSQQLHTGQEQLLAGSTKLDSXXXXXXXXXXXXSDGG 383 N +L + Q+A G QL G Q+ GS ++ + DG Sbjct: 662 -------NGGLGELSIGANQMAVGINQLAGGASQVTEGSGQVTTGLGTLSGGTGQLVDGV 714 Query: 384 SQLATGLQTFGQKLNQXXXXXXXXXXXXXXXXXXXVQLGQGLTKLAGGVDGLSEGAVKLK 443 ++LA G L Q+ GL L+ G L +G KL Sbjct: 715 NKLANGSGQVTTGLGTLSGGTGQLVDGVNKLANGSGQVTTGLGTLSNGSTQLIDGVNKLA 774 Query: 444 DGAGELNDGAGKLASGSGELAEKLTDAAADTSSVKSGDDTVSMFAEPVKLTEKTDHKLDH 503 DG+G++ DG K+ GS ELAEKL + A T VK D T MFA PVK+ + ++ + Sbjct: 775 DGSGKVTDGLVKVNDGSSELAEKLGEGAEKTGEVKGTDKTYDMFASPVKVKTEKMAEVPN 834 Query: 504 YGLGIAPYFLSLALFVGALVFSTVFSLRDS-NVPGASPMGRFLSRTLTFVMVSILQSLLA 562 YG G PYFLSL LFVGAL+ S V+ LRD+ VP S F+S+ + V I+Q+++A Sbjct: 835 YGTGFTPYFLSLGLFVGALLLSIVYPLRDTVGVP-KSGFSWFISKFGVLLSVGIIQAIVA 893 Query: 563 DIVLLYGLKLEVQSVPLFFLFTLIVSFSFTMIVQALVTWLDNPGRFLAIVLMIFQLTSSA 622 D++LL+GL +EVQS+P F LF++I S +F ++Q LVT + GRF+AI+ +I QLT+SA Sbjct: 894 DVILLFGLGVEVQSIPYFILFSIITSLAFIALIQCLVTAFGDAGRFIAIITLIMQLTTSA 953 Query: 623 GTFPLEMLPGWMQKVNPWLPMTHSIVGYKAIIGSGDYALMREQIVYLLIYAVIF----LA 678 GTFPLE++P ++Q N WLPMT+S+ G KA++ SGD+ M + I L+I+ V+ +A Sbjct: 954 GTFPLELIPKFLQPFNAWLPMTYSVSGLKAVVSSGDFDFMWQNIGMLMIFIVVLSLGTIA 1013 Query: 679 LTFLYFARQNKRTA 692 L RQ K A Sbjct: 1014 SLTLMHKRQFKNVA 1027 Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 134/419 (31%), Positives = 208/419 (49%), Gaps = 23/419 (5%) Query: 33 LPMLYSSFLVDASWDPYGNTGKLPVAVVNLDKGAVYEGKSMEVGKDFVDELKDNDDFKWN 92 +P+LY+ + A WDPY LPVAVVNLDKGAV++GK +EVGK VD LKDN FKW Sbjct: 30 VPILYAGMFLWAFWDPYKQLDDLPVAVVNLDKGAVFDGKPIEVGKGLVDNLKDNKSFKWE 89 Query: 93 FVNAAEAEDGMAHNRYYMTITIPANFSENATTLTAEHPVQAEIVFEPNSDYNFVAGQIGN 152 FV+ EA+ GM +YYM + IP +FS NATTL ++P + + PN NF++ QIG Sbjct: 90 FVSEKEAKKGMEGRKYYMLVRIPDDFSSNATTLLKDNPKPLNLEYIPNESLNFLSSQIGG 149 Query: 153 SAMSKLKAKLSTQITAAYTRSMFEQVDTISQGLGDAGEGATKLKDGAGKLQGGLATLKTN 212 +A+ K+K ++S+ +T Y MF+ + +S+GL D EGA+KL DG+ +L G + + Sbjct: 150 TAIEKIKTEVSSTLTKTYAEKMFDSIKDVSKGLADGAEGASKLHDGSSELHDGSSKVTDG 209 Query: 213 LNKLASGTTELQSGLKLLYNGAXXXXXXXXXXXXXXXXXXXXXXXXVKAEQQLQAGAVQS 272 L+ L + E++ G+ L +G+ ++ G + Sbjct: 210 LHTLQGKSGEMKDGVGRLIDGSGKVTDGLYTLQGKSG--------------EMTVGINKL 255 Query: 273 QKGAAQLNEGLLASKTGSSQLKEGLTASEAASSQLAAGADQVAKGLEQMMAATPGLQENE 332 G+ Q+ GL + S +++ G+ S Q+ G+ +V GL + T ++ Sbjct: 256 LDGSGQVTSGLYTLQGKSGEMETGINKLLDGSGQVTDGSSKVTNGLNVLNGKTGEMKSG- 314 Query: 333 QFQQLLAASRQVAAGSQQLHTGQEQLLAGSTKLDSXXXXXXXXXXXXSDGGSQLATGLQT 392 +L+ + Q+ GS Q+++G L+ S +L SDG QL GL+ Sbjct: 315 -ITELVNGAGQLYGGSSQVNSGLNLLVNKSGELQK-------WIGNLSDGSGQLYGGLKE 366 Query: 393 FGQKLNQXXXXXXXXXXXXXXXXXXXVQLGQGLTKLAGGVDGLSEGAVKLKDGAGELND 451 K + +L GL KL G + L EGA K++ G +LN+ Sbjct: 367 LEDKSIELNNGLKSVSAGSNKLEKGTGELSSGLEKLDGTKNQLEEGAQKIQQGLQDLNN 425 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.131 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 843,340,219 Number of extensions: 32679323 Number of successful extensions: 104733 Number of sequences better than 1.0e-05: 85 Number of HSP's gapped: 103018 Number of HSP's successfully gapped: 173 Length of query: 700 Length of database: 757,237,578 Length adjustment: 133 Effective length of query: 567 Effective length of database: 396,129,411 Effective search space: 224605376037 Effective search space used: 224605376037 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 130 (54.7 bits)