BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0009.p (364 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_693108.1| Xaa-Pro dipeptidase [Oceanobacillus iheyensis H... 301 2e-80 ref|NP_834320.1| Xaa-Pro dipeptidase [Bacillus cereus ATCC 14579... 300 5e-80 ref|NP_658642.1| Peptidase_M24, metallopeptidase family M24 [Bac... 295 1e-78 ref|NP_981041.1| proline dipeptidase [Bacillus cereus ATCC 10987... 295 1e-78 ref|ZP_00182859.1| hypothetical protein Exigu179401 [Exiguobacte... 294 2e-78 >ref|NP_693108.1| Xaa-Pro dipeptidase [Oceanobacillus iheyensis HTE831] dbj|BAC14143.1| Xaa-Pro dipeptidase [Oceanobacillus iheyensis HTE831] Length = 365 Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 148/365 (40%), Positives = 221/365 (60%), Gaps = 2/365 (0%) Query: 1 MNEALSTLEQGMAGGGLDALLVTDPKHVYYLTGFASNPHERFLGLLLIRGGEPVLIVPXX 60 M E L + +D+ +T +VYYL+ + + PHER +G+ L +P+ ++P Sbjct: 1 MQERLENFLNKLKEQTIDSAFITSKANVYYLSNYYTEPHERIVGIYLSENFDPIFLLPKM 60 Query: 61 XXXXXXXXSSVTKILTHSDTDNPYELLKSCF--AGSKPGTVGIEKEHFTVNRYEQLAEAV 118 IL++ D +NP+E+LK +P +V +E++H T++RY+ + + Sbjct: 61 EESDARNAGWKYTILSYYDHENPWEILKDYLNKQNHQPQSVALEQDHITMDRYQAIQNTL 120 Query: 119 PADAFRDIGHLLRSMRAKKTPDEVSRMKHAAELVEEVLRQGLTHVKAGVSEIELVAELEY 178 P F+D +L +R K+ E+S +K AAEL + ++ G+ ++ G+SE++LVA +EY Sbjct: 121 PEAQFQDAKEILAQLRVIKSDKELSLLKTAAELADFGIQTGVETIQEGISELDLVATIEY 180 Query: 179 LMKKVGASGPSFDTMVLSGPNTALPHGVPGSRIIQPGDFLMFDLGVYAAGYASDITRTFA 238 +KK G SF TM LSG TA PHG P + ++ F++FDLGV GY SDITRT A Sbjct: 181 SLKKQGIREMSFQTMALSGAKTASPHGHPSTSKLEKNGFVLFDLGVIYQGYCSDITRTVA 240 Query: 239 VEEAHPKLVEIYNTVLAANEAGIAASRAGATFGSVDRAAREVIEASGYGEYFIHRVGHGL 298 + +Y TVL A EA I S G + G +D+ AR+VI +GYGEYF HR+GHGL Sbjct: 241 FGNLTEEQKNVYETVLNAEEAAIEKSVVGTSVGVIDQTARKVINDAGYGEYFTHRIGHGL 300 Query: 299 GMDTHEYPSLHGMNGDFIETGNVFTVEPGIYVAGLGGVRIEDDVWITPEGPQTLTTMSKA 358 G++THEYPS+HG N +++G FT+EPGIYV +GGVRIED + +T EGP+TLT K Sbjct: 301 GIETHEYPSMHGENNLPLQSGMTFTIEPGIYVPNVGGVRIEDMIHMTEEGPKTLTKYPKN 360 Query: 359 LTVLH 363 L +++ Sbjct: 361 LQIVN 365 >ref|NP_834320.1| Xaa-Pro dipeptidase [Bacillus cereus ATCC 14579] gb|AAP11521.1| Xaa-Pro dipeptidase [Bacillus cereus ATCC 14579] Length = 365 Score = 300 bits (767), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 150/364 (41%), Positives = 216/364 (59%), Gaps = 2/364 (0%) Query: 1 MNEALSTLEQGMAGGGLDALLVTDPKHVYYLTGFASNPHERFLGLLLIRGGEPVLIVPXX 60 MN L L Q + ++A +T +V+Y+T F PHER LG+ + + EP+LI P Sbjct: 1 MNARLENLMQWLKEKNVEAAFLTSTPNVFYMTNFHCEPHERLLGMFVFQEKEPILICPKM 60 Query: 61 XXXXXXXXSSVTKILTHSDTDNPYELLKSCFA--GSKPGTVGIEKEHFTVNRYEQLAEAV 118 +I+ +DTD P++++ G V IEKEH V RYE+L + Sbjct: 61 EEGQARNAGWAHEIIGFTDTDRPWDMIAKAIKDRGINANAVAIEKEHLNVERYEELTKLF 120 Query: 119 PADAFRDIGHLLRSMRAKKTPDEVSRMKHAAELVEEVLRQGLTHVKAGVSEIELVAELEY 178 P AF+ +R +R K E+S ++ AA++ + + G+ +K SE+E++A +E+ Sbjct: 121 PNAAFKSAEEKVRELRLIKDEKELSILREAAKMADYAVEVGVNAIKEDRSELEVLAIIEH 180 Query: 179 LMKKVGASGPSFDTMVLSGPNTALPHGVPGSRIIQPGDFLMFDLGVYAAGYASDITRTFA 238 +K G SFDTMVL+G N+ALPHG+PG+ ++ GDF++FDLGV GY SDITRT A Sbjct: 181 ELKTKGIHKMSFDTMVLAGANSALPHGIPGANKMKRGDFVLFDLGVIIDGYCSDITRTVA 240 Query: 239 VEEAHPKLVEIYNTVLAANEAGIAASRAGATFGSVDRAAREVIEASGYGEYFIHRVGHGL 298 E + IYNTVLA + A + G T G++D AAR VI +GYG++F HR+GHGL Sbjct: 241 FGEISEEQTRIYNTVLAGQLQAVEACKPGVTLGAIDNAARSVIADAGYGDFFPHRLGHGL 300 Query: 299 GMDTHEYPSLHGMNGDFIETGNVFTVEPGIYVAGLGGVRIEDDVWITPEGPQTLTTMSKA 358 G+ HEYP + N ++ G VFT+EPGIYV +GGVRIEDD++IT +G + LT K Sbjct: 301 GISVHEYPDVKAGNEAPLKEGMVFTIEPGIYVPNVGGVRIEDDIYITKDGSEILTKFPKE 360 Query: 359 LTVL 362 L + Sbjct: 361 LQFV 364 >ref|NP_658642.1| Peptidase_M24, metallopeptidase family M24 [Bacillus anthracis A2012] ref|NP_847062.1| proline dipeptidase [Bacillus anthracis str. Ames] gb|AAP28548.1| proline dipeptidase [Bacillus anthracis str. Ames] Length = 365 Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 149/364 (40%), Positives = 214/364 (58%), Gaps = 2/364 (0%) Query: 1 MNEALSTLEQGMAGGGLDALLVTDPKHVYYLTGFASNPHERFLGLLLIRGGEPVLIVPXX 60 MN L L Q + ++A +T +V+Y+T F PHER LG+ + + EP+LI P Sbjct: 1 MNARLENLMQWLKEKNVEAAFLTSTPNVFYMTNFHCEPHERLLGMFVFQEKEPILICPKM 60 Query: 61 XXXXXXXXSSVTKILTHSDTDNPYELLKSCFA--GSKPGTVGIEKEHFTVNRYEQLAEAV 118 +I+ +DTD P++++ G V IEKE V RYE+L + Sbjct: 61 EEGQARNAGWAHEIIGFTDTDRPWDMIAKAIKDRGINANAVAIEKELLNVERYEELTKLF 120 Query: 119 PADAFRDIGHLLRSMRAKKTPDEVSRMKHAAELVEEVLRQGLTHVKAGVSEIELVAELEY 178 P AF +R +R K E+S ++ AA++ + + G+ +K SE+E++A +E+ Sbjct: 121 PNAAFTSAEEKVRELRLIKDEKELSILREAAKMADYAVEVGVNAIKEDRSELEVLAIIEH 180 Query: 179 LMKKVGASGPSFDTMVLSGPNTALPHGVPGSRIIQPGDFLMFDLGVYAAGYASDITRTFA 238 +K G SFDTMVL+G N+ALPHG+PG+ ++ GDF++FDLGV GY SDITRT A Sbjct: 181 ELKTKGIHKMSFDTMVLAGANSALPHGIPGANKMKRGDFVLFDLGVIIDGYCSDITRTVA 240 Query: 239 VEEAHPKLVEIYNTVLAANEAGIAASRAGATFGSVDRAAREVIEASGYGEYFIHRVGHGL 298 E + IYNTVLA + A + G T G++D AAR VI +GYG++F HR+GHGL Sbjct: 241 FGEISEEQTRIYNTVLAGQLQAVEACKPGVTLGAIDNAARSVIADAGYGDFFPHRLGHGL 300 Query: 299 GMDTHEYPSLHGMNGDFIETGNVFTVEPGIYVAGLGGVRIEDDVWITPEGPQTLTTMSKA 358 G+ HEYP + N ++ G VFT+EPGIYV +GGVRIEDD++IT +G + LT K Sbjct: 301 GISVHEYPDVKAGNESPLKEGMVFTIEPGIYVPNVGGVRIEDDIYITKDGSEILTKFPKE 360 Query: 359 LTVL 362 L + Sbjct: 361 LQFV 364 >ref|NP_981041.1| proline dipeptidase [Bacillus cereus ATCC 10987] gb|AAS43649.1| proline dipeptidase [Bacillus cereus ATCC 10987] Length = 365 Score = 295 bits (754), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 148/364 (40%), Positives = 214/364 (58%), Gaps = 2/364 (0%) Query: 1 MNEALSTLEQGMAGGGLDALLVTDPKHVYYLTGFASNPHERFLGLLLIRGGEPVLIVPXX 60 MN L L Q + ++A +T +V+Y+T PHER LG+ + + EP+LI P Sbjct: 1 MNARLENLMQWLKEKNVEAAFLTSTPNVFYMTNIHCEPHERLLGMFVFQEKEPILICPKM 60 Query: 61 XXXXXXXXSSVTKILTHSDTDNPYELLKSCFA--GSKPGTVGIEKEHFTVNRYEQLAEAV 118 +I+ +DTD P++++ G V IEKEH V RYE+L + Sbjct: 61 EEGQARNAGWAHEIIGFTDTDRPWDMIAKAIKDRGINANAVAIEKEHLNVERYEELTKLF 120 Query: 119 PADAFRDIGHLLRSMRAKKTPDEVSRMKHAAELVEEVLRQGLTHVKAGVSEIELVAELEY 178 P AF +R +R K E+S ++ AA++ + + G+ +K SE+E++A +E+ Sbjct: 121 PNAAFTSAEEKVRELRLIKDEKELSILREAAKMADYAVEVGVNAIKEDRSELEVLAIIEH 180 Query: 179 LMKKVGASGPSFDTMVLSGPNTALPHGVPGSRIIQPGDFLMFDLGVYAAGYASDITRTFA 238 +K G SFDTMVL+G N+ALPHG+PG+ ++ GDF++FDLGV GY SDITRT A Sbjct: 181 ELKTEGIHKMSFDTMVLAGANSALPHGIPGANKMKRGDFVLFDLGVIIDGYCSDITRTVA 240 Query: 239 VEEAHPKLVEIYNTVLAANEAGIAASRAGATFGSVDRAAREVIEASGYGEYFIHRVGHGL 298 + + IYNTVLA + A + G T G++D AAR VI +GYG++F HR+GHGL Sbjct: 241 FGDISEEQTRIYNTVLAGQLQAVEACKPGVTLGAIDNAARSVIADAGYGDFFPHRLGHGL 300 Query: 299 GMDTHEYPSLHGMNGDFIETGNVFTVEPGIYVAGLGGVRIEDDVWITPEGPQTLTTMSKA 358 G+ HEYP + N ++ G VFT+EPGIYV +GGVRIEDD++IT +G + LT K Sbjct: 301 GISVHEYPDVKAGNESPLKEGMVFTIEPGIYVPNVGGVRIEDDIYITKDGSEILTKFPKE 360 Query: 359 LTVL 362 L + Sbjct: 361 LQFV 364 >ref|ZP_00182859.1| hypothetical protein Exigu179401 [Exiguobacterium sp. 255-15] Length = 367 Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 151/361 (41%), Positives = 218/361 (60%), Gaps = 2/361 (0%) Query: 1 MNEALSTLEQGMAGGGLDALLVTDPKHVYYLTGFASNPHERFLGLLLIRGGEPVLIVPXX 60 M E + + + + G+D L+T V+Y +G + PHER + +++ G+ L P Sbjct: 1 MLERTNQISRVLKESGIDVALITSKASVFYFSGVYAEPHERVMAVIVDANGKRALFCPAL 60 Query: 61 XXXXXXXXSSVTKILTHSDTDNPYELLKSCFA--GSKPGTVGIEKEHFTVNRYEQLAEAV 118 +++T++D ++P++ + +GIE EH T +R+++L Sbjct: 61 EANIVAASPWDGEVITYADHEHPFDKISEALKTFSISNNRIGIEGEHMTFSRFKELEARQ 120 Query: 119 PADAFRDIGHLLRSMRAKKTPDEVSRMKHAAELVEEVLRQGLTHVKAGVSEIELVAELEY 178 A DIG L+++R KK E+ ++ AA L +E + G ++ GV+E+E+++ +E+ Sbjct: 121 ENAAILDIGQPLQALRLKKDAQEIEILREAAALADEAVEIGKQAIRPGVTEMEVISTIEF 180 Query: 179 LMKKVGASGPSFDTMVLSGPNTALPHGVPGSRIIQPGDFLMFDLGVYAAGYASDITRTFA 238 MKK G SFDT+VL G N+A PHGVPG R+IQ GDF++FDLGV GY SDITRTF Sbjct: 181 EMKKKGVREMSFDTLVLFGANSADPHGVPGDRVIQEGDFVLFDLGVVWKGYCSDITRTFV 240 Query: 239 VEEAHPKLVEIYNTVLAANEAGIAASRAGATFGSVDRAAREVIEASGYGEYFIHRVGHGL 298 EA + IY TVL A EA AS+ G T G++D+AAR VI+ +GYG+YF HRVGHGL Sbjct: 241 YGEASEEQQTIYQTVLQALEAATEASQVGVTLGTLDQAARNVIDQAGYGDYFTHRVGHGL 300 Query: 299 GMDTHEYPSLHGMNGDFIETGNVFTVEPGIYVAGLGGVRIEDDVWITPEGPQTLTTMSKA 358 G+D HE+PSL N E G V+T+EPGIYV +GGVRIEDD+ +T GP+ LT K Sbjct: 301 GIDVHEFPSLASNNLLTAEAGIVYTLEPGIYVPNVGGVRIEDDIHLTENGPEALTHYPKH 360 Query: 359 L 359 L Sbjct: 361 L 361 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.136 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 532,205,344 Number of extensions: 21648535 Number of successful extensions: 54808 Number of sequences better than 1.0e-05: 1573 Number of HSP's gapped: 53331 Number of HSP's successfully gapped: 1576 Length of query: 364 Length of database: 757,237,578 Length adjustment: 127 Effective length of query: 237 Effective length of database: 412,420,005 Effective search space: 97743541185 Effective search space used: 97743541185 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 126 (53.1 bits)