BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0225.0007.p (619 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAA11112.1| cytochrome c oxidase subunit I [Geobacillus stea... 843 0.0 ref|NP_389373.1| cytochrome caa3 oxidase (subunit I) [Bacillus s... 842 0.0 dbj|BAA12829.1| cytochrome c oxidase subunit I [Bacillus sp.] 840 0.0 emb|CAA38077.1| cytochrome-c oxidase subunit I [Bacillus subtilis] 835 0.0 ref|NP_846391.1| cytochrome c oxidase, subunit I [Bacillus anthr... 834 0.0 >dbj|BAA11112.1| cytochrome c oxidase subunit I [Geobacillus stearothermophilus] Length = 615 Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/610 (68%), Positives = 488/610 (80%), Gaps = 11/610 (1%) Query: 7 LMDWITTVDHKKIAILYLWAGGLFFGIGGLEAILIRIQLIKPMNTFLDAQTFNELITMHG 66 L D++TTVDHKKIA LYL +GG+FF +GGLEA+ IRIQL KP N FL +NE++TMHG Sbjct: 14 LWDYLTTVDHKKIAHLYLISGGIFFLLGGLEALFIRIQLAKPNNDFLVGGLYNEVLTMHG 73 Query: 67 TTMIFLGVMPVIFALMNAVIPLQIGARDVAFPFLNALGFWTFLFGGVLLNLSWIMGGAPD 126 TTMI L MP++FA MNAV+PLQIGARDVAFPFLNALGFW F FGGV LN SW +GGAPD Sbjct: 74 TTMILLAAMPLVFAFMNAVVPLQIGARDVAFPFLNALGFWLFFFGGVFLNCSWFLGGAPD 133 Query: 127 AGWTSYTPLSTTQYSGTHGVDFYTIGLQIAGLGTLIGGINFLATIITMRAPGMSFMRMPM 186 AGWTSY L+ HGVDFYT+GLQI+GLGTLIGGINFL TII MRAPGM+FMRMPM Sbjct: 134 AGWTSYASLALDS-KAHHGVDFYTLGLQISGLGTLIGGINFLVTIINMRAPGMTFMRMPM 192 Query: 187 FVWASFITSAIILFAFPAITVGLVLLTFDRILEANFFDTSAGGNSVLWQHIFWIFGHPEV 246 F WA+F+TSA+ILFAFP +TVGL+ L DR+ NFF+ +AGGN+++W+H+FW+FGHPEV Sbjct: 193 FTWATFVTSALILFAFPPLTVGLIFLMMDRLFGGNFFNPAAGGNTIIWEHLFWVFGHPEV 252 Query: 247 YILILPAFGIISEVIPTFARKRLFGYSSMVFATILIAFLGFMVWAHHMFTTGLGPVANAL 306 YIL+LPAFGI SE+ TF+RKRLFGYSSMVFAT+LIAFLGFMVWAHHMFT G+GP+ANA+ Sbjct: 253 YILVLPAFGIFSEIFATFSRKRLFGYSSMVFATVLIAFLGFMVWAHHMFTVGMGPIANAI 312 Query: 307 FSVSTMLIAVPTGIKIFNWLFTMWGGQVRFTSPNLFAVGFIPTFTMGGVTGVMLASAPAD 366 FSV+TM IAVPTGIKIFNWLFTMWGG ++FT+P +AV FIP+F MGGVTGVMLA+A AD Sbjct: 313 FSVATMTIAVPTGIKIFNWLFTMWGGSIKFTTPMHYAVAFIPSFVMGGVTGVMLAAAAAD 372 Query: 367 FQFHDTYFVVAHFHYVIVGGLVSGLFAGLHYWWPKMFGRMLSETLGKWTFWTFIIGFHLT 426 +Q+HD+YFVVAHFHYVIVGG+V L AG HYWWPKMFGRML+ETLGK TFW F IGFHLT Sbjct: 373 YQYHDSYFVVAHFHYVIVGGVVFALLAGTHYWWPKMFGRMLNETLGKITFWLFFIGFHLT 432 Query: 427 FFVQHFLGLMGMQRRVFTYLPNQQFDLLNLISTIGAGLMGVGVLIFLTNIFLTSRKPADA 486 FF+QHFLGLMGM RRVFT+LP Q + N IST+GA M ++ L NI + S K A Sbjct: 433 FFIQHFLGLMGMPRRVFTFLPGQGLETGNFISTVGAFFMAAATVVLLINI-VISVKGEKA 491 Query: 487 PDDPWEDGRTLEWTISSPPPEYNFKQTPLVRGLDAFWKEKTSGHKTMTPAEPVGPIHMPS 546 P D W DGRTLEW I SPPP YNF Q PLVRGLD W EK G K +TPAEP+G IHMP+ Sbjct: 492 PADAWGDGRTLEWAIRSPPPVYNFAQLPLVRGLDPLWLEKMEGKKELTPAEPLGDIHMPN 551 Query: 547 ATILPFLMSVGIFIAGLGFMFSRDDFGNAFMGFLFNNYLVTAIGLVITFGSMLLRSLYDD 606 ++ LPF+MS G+F+A GF + ++ +G L GL+ITFGSM LRS+ DD Sbjct: 552 SSFLPFIMSFGLFVAAFGFTYHQETAWGLPVGIL---------GLLITFGSMFLRSVIDD 602 Query: 607 HGWHIEPEEL 616 HG+HI EE+ Sbjct: 603 HGFHIHKEEV 612 >ref|NP_389373.1| cytochrome caa3 oxidase (subunit I) [Bacillus subtilis] sp|P24010|COX1_BACSU Cytochrome c oxidase polypeptide I (Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase aa(3) subunit 1) pir||E69609 cytochrome-c oxidase (EC 1.9.3.1) chain I - Bacillus subtilis emb|CAB11343.1| cytochrome c oxidase subunit I, aa3 type [Bacillus subtilis] emb|CAB13363.1| cytochrome caa3 oxidase (subunit I) [Bacillus subtilis subsp. subtilis str. 168] Length = 622 Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/617 (67%), Positives = 494/617 (80%), Gaps = 13/617 (2%) Query: 2 KRHTGLM--DWITTVDHKKIAILYLWAGGLFFGIGGLEAILIRIQLIKPMNTFLDAQTFN 59 KR G M D++TTVDHKKIAILYL AGG FF +GG+EA+ IRIQL KP N FL AQ +N Sbjct: 8 KRTRGSMLWDYLTTVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYN 67 Query: 60 ELITMHGTTMIFLGVMPVIFALMNAVIPLQIGARDVAFPFLNALGFWTFLFGGVLLNLSW 119 E++TMHGTTMIFL MP++FALMNAV+PLQIGARDV+FPFLNALGFW F FG + LNLSW Sbjct: 68 EVMTMHGTTMIFLAAMPLLFALMNAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSW 127 Query: 120 IMGGAPDAGWTSYTPLSTTQYSGTHGVDFYTIGLQIAGLGTLIGGINFLATIITMRAPGM 179 +GGAPDAGWTSY LS +S HG+DF+ +GLQI+GLGTLI GINFLATII MRAPGM Sbjct: 128 FLGGAPDAGWTSYASLSL--HSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGM 185 Query: 180 SFMRMPMFVWASFITSAIILFAFPAITVGLVLLTFDRILEANFFDTSAGGNSVLWQHIFW 239 ++MR+P+F W +F+ SA+ILFAFP +TVGL L+ DR+ NFF+ GGN+V+W+H+FW Sbjct: 186 TYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFW 245 Query: 240 IFGHPEVYILILPAFGIISEVIPTFARKRLFGYSSMVFATILIAFLGFMVWAHHMFTTGL 299 IFGHPEVYILILPAFGI SEVIP FARKRLFGYSSMVFA +LI FLGFMVW HHMFTTGL Sbjct: 246 IFGHPEVYILILPAFGIFSEVIPVFARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGL 305 Query: 300 GPVANALFSVSTMLIAVPTGIKIFNWLFTMWGGQVRFTSPNLFAVGFIPTFTMGGVTGVM 359 GP+ANA+F+V+TM IA+PTGIKIFNWL T+WGG V++T+ L+AV FIP+F +GGVTGVM Sbjct: 306 GPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVM 365 Query: 360 LASAPADFQFHDTYFVVAHFHYVIVGGLVSGLFAGLHYWWPKMFGRMLSETLGKWTFWTF 419 LA+A AD+QFHDTYFVVAHFHYVI+GG+V GL AG+H+WWPKMFG++L ET+GK +F F Sbjct: 366 LAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKISFVLF 425 Query: 420 IIGFHLTFFVQHFLGLMGMQRRVFTYLPNQQFDLLNLISTIGAGLMGVGVLIFLTNIFLT 479 IGFHLTFF+QHF+GLMGM RRV+T+LP Q + NLISTIGA M V++ L N+ T Sbjct: 426 FIGFHLTFFIQHFVGLMGMPRRVYTFLPGQGLETGNLISTIGAFFMAAAVILLLVNVIWT 485 Query: 480 SRKPADAPDDPWEDGRTLEWTISSPPPEYNFKQTPLVRGLDAFWKEKTSGHKTMTPAEPV 539 S K DPW DGRTLEWT+SSPPPEYNFKQ P VRGLD W EK +GHK+MTPAEPV Sbjct: 486 SVKGEYVGADPWHDGRTLEWTVSSPPPEYNFKQLPFVRGLDPLWIEKQAGHKSMTPAEPV 545 Query: 540 GPIHMPSATILPFLMSVGIFIAGLGFMFSRDDFGNAFMGFLFNNYLVTAIGLVITFGSML 599 IHMP+ +ILP ++S G+F+A G ++ R D+ V IGL ITF +ML Sbjct: 546 DDIHMPNGSILPLIISFGLFVAAFGLLY-RSDYAWGLP--------VIFIGLGITFITML 596 Query: 600 LRSLYDDHGWHIEPEEL 616 LRS+ DDHG+HI EEL Sbjct: 597 LRSVIDDHGYHIHKEEL 613 >dbj|BAA12829.1| cytochrome c oxidase subunit I [Bacillus sp.] Length = 619 Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/608 (67%), Positives = 490/608 (80%), Gaps = 11/608 (1%) Query: 9 DWITTVDHKKIAILYLWAGGLFFGIGGLEAILIRIQLIKPMNTFLDAQTFNELITMHGTT 68 D++TTVDHKKIAI+YL AGG FF +GGLEA+ IR+QL+KP + FL+A +NE++TMHGTT Sbjct: 13 DYLTTVDHKKIAIMYLIAGGFFFLVGGLEAMFIRVQLLKPESGFLEAGLYNEILTMHGTT 72 Query: 69 MIFLGVMPVIFALMNAVIPLQIGARDVAFPFLNALGFWTFLFGGVLLNLSWIMGGAPDAG 128 MIFL MP+IFA MNAV+PLQIGARDVAFPFLN+LGFW F FGGV LNLSW MGGAPDAG Sbjct: 73 MIFLAAMPLIFAFMNAVVPLQIGARDVAFPFLNSLGFWLFFFGGVFLNLSWFMGGAPDAG 132 Query: 129 WTSYTPLSTTQYSGTHGVDFYTIGLQIAGLGTLIGGINFLATIITMRAPGMSFMRMPMFV 188 WTSY LS S HGVDFY +GLQI+G+GTLI GINFL TII MRAPGM++MRMP+F Sbjct: 133 WTSYASLSLA--SEGHGVDFYVLGLQISGIGTLIAGINFLVTIINMRAPGMTYMRMPLFT 190 Query: 189 WASFITSAIILFAFPAITVGLVLLTFDRILEANFFDTSAGGNSVLWQHIFWIFGHPEVYI 248 W++F+ SA+ILFAFPA+TVGL+LL FDR+ + FFD + GGN+++W+H+FWIFGHPEVYI Sbjct: 191 WSTFVASALILFAFPALTVGLLLLMFDRMFGSAFFDPALGGNTIIWEHLFWIFGHPEVYI 250 Query: 249 LILPAFGIISEVIPTFARKRLFGYSSMVFATILIAFLGFMVWAHHMFTTGLGPVANALFS 308 LILPAFGI SE+ TF++KRLFGYSSMVFAT+LI FLGFMVWAHHMFTTGLGP+AN++F+ Sbjct: 251 LILPAFGIFSEIFATFSKKRLFGYSSMVFATVLIGFLGFMVWAHHMFTTGLGPIANSIFA 310 Query: 309 VSTMLIAVPTGIKIFNWLFTMWGGQVRFTSPNLFAVGFIPTFTMGGVTGVMLASAPADFQ 368 V+TM IAVPTGIKIFNWLFTMWGGQ++ + L+A+ FIP+F MGGVTG+ML SA AD+Q Sbjct: 311 VATMAIAVPTGIKIFNWLFTMWGGQIKVNTAMLWAIAFIPSFVMGGVTGIMLGSAAADYQ 370 Query: 369 FHDTYFVVAHFHYVIVGGLVSGLFAGLHYWWPKMFGRMLSETLGKWTFWTFIIGFHLTFF 428 +HDTYFVVAHFHYVIVGG+V LFA HYWWPKMFG++L ETLGK TFW F IGFHLTFF Sbjct: 371 YHDTYFVVAHFHYVIVGGVVFALFAATHYWWPKMFGKVLDETLGKITFWLFFIGFHLTFF 430 Query: 429 VQHFLGLMGMQRRVFTYLPNQQFDLLNLISTIGAGLMGVGVLIFLTNIFLTSRKPADAPD 488 +QHFLGLMGM RR +T+LP Q F+L N IST+GA M G ++ L NI TS Sbjct: 431 IQHFLGLMGMPRRTYTFLPGQGFELGNFISTVGAFFMAAGTIVLLVNIVKTSFSKQSVSG 490 Query: 489 DPWEDGRTLEWTISSPPPEYNFKQTPLVRGLDAFWKEKTSGHKTMTPAEPVGPIHMPSAT 548 D W DGRTLEW +SPP EYNFKQTPLVRGLD W EK +G K M PAEPVG IHMP+ + Sbjct: 491 DVWGDGRTLEWATASPPLEYNFKQTPLVRGLDPLWVEKMAGKKEMHPAEPVGDIHMPNGS 550 Query: 549 ILPFLMSVGIFIAGLGFMFSRDDFGNAFMGFLFNNYLVTAIGLVITFGSMLLRSLYDDHG 608 I+PF++S+G+FIA G M++++ V IGLVITFGSM RS+ +DHG Sbjct: 551 IIPFIISLGLFIAAFGAMYNQERTWGI---------PVLIIGLVITFGSMFFRSVIEDHG 601 Query: 609 WHIEPEEL 616 +HI E++ Sbjct: 602 YHIHKEDI 609 >emb|CAA38077.1| cytochrome-c oxidase subunit I [Bacillus subtilis] Length = 621 Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/617 (67%), Positives = 494/617 (80%), Gaps = 14/617 (2%) Query: 2 KRHTGLM--DWITTVDHKKIAILYLWAGGLFFGIGGLEAILIRIQLIKPMNTFLDAQTFN 59 KR G M D++TTVDHKKIAILYL AGG FF +GG+EA+ IRIQL KP N FL AQ +N Sbjct: 8 KRTRGSMLWDYLTTVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYN 67 Query: 60 ELITMHGTTMIFLGVMPVIFALMNAVIPLQIGARDVAFPFLNALGFWTFLFGGVLLNLSW 119 E++TMHGTTMIFL MP++FALMNAV+PLQIGARDV+FPFLNALGFW F FGG+ LNLSW Sbjct: 68 EVMTMHGTTMIFLAAMPLLFALMNAVVPLQIGARDVSFPFLNALGFWLFFFGGIFLNLSW 127 Query: 120 IMGGAPDAGWTSYTPLSTTQYSGTHGVDFYTIGLQIAGLGTLIGGINFLATIITMRAPGM 179 +GGAPDAGWTSY LS +S HG+DF +GLQI+GLGTLI GINFLATII MRAPGM Sbjct: 128 FLGGAPDAGWTSYASLSL--HSKGHGIDFSILGLQISGLGTLIAGINFLATIINMRAPGM 185 Query: 180 SFMRMPMFVWASFITSAIILFAFPAITVGLVLLTFDRILEANFFDTSAGGNSVLWQHIFW 239 ++MR+P+F W +F+ SA+ILFAFP +TVGL L+ DR+ NFF+ GGN+V+W+H+FW Sbjct: 186 TYMRLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFW 245 Query: 240 IFGHPEVYILILPAFGIISEVIPTFARKRLFGYSSMVFATILIAFLGFMVWAHHMFTTGL 299 IFGHPEVYILILPAFGI SEVIP FARKRLFGYSSMVFA I++ FLGFMVW HHMFTTGL Sbjct: 246 IFGHPEVYILILPAFGIFSEVIPVFARKRLFGYSSMVFA-IVLGFLGFMVWVHHMFTTGL 304 Query: 300 GPVANALFSVSTMLIAVPTGIKIFNWLFTMWGGQVRFTSPNLFAVGFIPTFTMGGVTGVM 359 GP+ANA+F+V+TM IA+PTGIKIFNWL T+WGG V++T+ L+AV FIP+F +GGVTGVM Sbjct: 305 GPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVM 364 Query: 360 LASAPADFQFHDTYFVVAHFHYVIVGGLVSGLFAGLHYWWPKMFGRMLSETLGKWTFWTF 419 LA+A AD+QFHDTYFVVAHFHYVI+GG+V GL AG+H+WWPKMFG++L ET+GK +F F Sbjct: 365 LAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKISFVLF 424 Query: 420 IIGFHLTFFVQHFLGLMGMQRRVFTYLPNQQFDLLNLISTIGAGLMGVGVLIFLTNIFLT 479 IGFHLTFF+QHF+GLMGM RRV+T+LP Q + NLISTIGA M V++ L N+ T Sbjct: 425 FIGFHLTFFIQHFVGLMGMPRRVYTFLPGQGLETGNLISTIGAFFMAARVILLLVNVIWT 484 Query: 480 SRKPADAPDDPWEDGRTLEWTISSPPPEYNFKQTPLVRGLDAFWKEKTSGHKTMTPAEPV 539 S K DPW DGRTLEWT+SSPPPEYNFKQ P VRGLD W EK +GHK+MTPAEPV Sbjct: 485 SVKGEYVGADPWHDGRTLEWTVSSPPPEYNFKQLPFVRGLDPLWIEKQAGHKSMTPAEPV 544 Query: 540 GPIHMPSATILPFLMSVGIFIAGLGFMFSRDDFGNAFMGFLFNNYLVTAIGLVITFGSML 599 IHMP+ +ILP ++S G+F+A G ++ R D+ V IGL ITF +ML Sbjct: 545 DDIHMPNGSILPLIISFGLFVAAFGLLY-RSDYAWGLP--------VIFIGLGITFITML 595 Query: 600 LRSLYDDHGWHIEPEEL 616 LRS+ DDHG+HI EEL Sbjct: 596 LRSVIDDHGYHIHKEEL 612 >ref|NP_846391.1| cytochrome c oxidase, subunit I [Bacillus anthracis str. Ames] gb|AAP27877.1| cytochrome c oxidase, subunit I [Bacillus anthracis str. Ames] Length = 611 Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/614 (66%), Positives = 491/614 (79%), Gaps = 16/614 (2%) Query: 9 DWITTVDHKKIAILYLWAGGLFFGIGGLEAILIRIQLIKPMNTFLDAQTFNELITMHGTT 68 D++TTVDHKKIAILYL AGGLFF IGG+EA+ IR+QL P N FL +N+++TMHGTT Sbjct: 7 DYLTTVDHKKIAILYLIAGGLFFVIGGIEALFIRLQLAIPNNAFLVGDAYNQVLTMHGTT 66 Query: 69 MIFLGVMPVIFALMNAVIPLQIGARDVAFPFLNALGFWTFLFGGVLLNLSWIMGGAPDAG 128 MIFL MP++FA MNA +PLQIGARDVAFPFLN+LGFW F FGGV LNLSW +GGAPDAG Sbjct: 67 MIFLAAMPLVFAFMNAAVPLQIGARDVAFPFLNSLGFWLFFFGGVFLNLSWFLGGAPDAG 126 Query: 129 WTSYTPLSTTQYSGTHGVDFYTIGLQIAGLGTLIGGINFLATIITMRAPGMSFMRMPMFV 188 WTSY L+ S HGVDFY +GLQI+G+GTLIGGINFL TII MRAPGM++MRMPMF Sbjct: 127 WTSYASLALA--SKGHGVDFYVLGLQISGIGTLIGGINFLVTIINMRAPGMTYMRMPMFT 184 Query: 189 WASFITSAIILFAFPAITVGLVLLTFDRILEANFFDTSAGGNSVLWQHIFWIFGHPEVYI 248 W +F+TS++ILFAFP +TVGL LL DR+ +FF+ + GGN+++W+H+FWIFGHPEVYI Sbjct: 185 WTTFVTSSLILFAFPPLTVGLGLLMLDRLFGTSFFNPALGGNTIIWEHLFWIFGHPEVYI 244 Query: 249 LILPAFGIISEVIPTFARKRLFGYSSMVFATILIAFLGFMVWAHHMFTTGLGPVANALFS 308 LILPAFGI SE+ TF++KRLFGYSSMVFAT+LI FLGFMVWAHHMFT GLGPVANA+FS Sbjct: 245 LILPAFGIFSEIFATFSKKRLFGYSSMVFATVLIGFLGFMVWAHHMFTVGLGPVANAIFS 304 Query: 309 VSTMLIAVPTGIKIFNWLFTMWGGQVRFTSPNLFAVGFIPTFTMGGVTGVMLASAPADFQ 368 V+TM IAVPTGIKIFNWLFTMWGG +RFT+P ++AV FIP+F MGGVTGVMLASAPAD+Q Sbjct: 305 VATMAIAVPTGIKIFNWLFTMWGGSIRFTTPMMWAVAFIPSFVMGGVTGVMLASAPADYQ 364 Query: 369 FHDTYFVVAHFHYVIVGGLVSGLFAGLHYWWPKMFGRMLSETLGKWTFWTFIIGFHLTFF 428 FHD YFVVAHFHYVIVGG+V GL AG HY+WP MF ++L+ETLGK TFW F IGFHLTFF Sbjct: 365 FHDNYFVVAHFHYVIVGGVVFGLLAGAHYYWPLMFNKILNETLGKITFWLFFIGFHLTFF 424 Query: 429 VQHFLGLMGMQRRVFTYLPNQQFDLLNLISTIGAGLMGVGVLIFLTNIFLTSRKPADAPD 488 +QHFLGL+GM RR +TYL Q ++ N+IS+IGA M +G ++ L N+ T+ A Sbjct: 425 IQHFLGLIGMPRRYYTYLEGQGLEMGNMISSIGAVFMALGTIVLLFNVIKTTVSKEKAGR 484 Query: 489 DPWEDGRTLEWTISSPPPEYNFKQTPLVRGLDAFWKEKTSGHKTMTPAEPVGPIHMPSAT 548 DPW DGRTLEWT+ +P PEYNFKQ P VRGLD FW EK G+K MT AEPVG IHMP+A+ Sbjct: 485 DPW-DGRTLEWTMPAPTPEYNFKQLPFVRGLDPFWIEKREGNKEMTAAEPVGDIHMPNAS 543 Query: 549 ILPFLMSVGIFIAGLGFMF---SRDDFGNAFMGFLFNNYLVTAIGLVITFGSMLLRSLYD 605 PF++S+G+FIA G M+ +D F LV IGL+ITFG+M LRS+ D Sbjct: 544 FSPFIISLGLFIAAFGAMYMQGGKDKFW----------LLVAIIGLIITFGAMFLRSVID 593 Query: 606 DHGWHIEPEELEGR 619 DHG+HI E+LE + Sbjct: 594 DHGYHIHKEDLEDK 607 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.330 0.145 0.473 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 975,279,443 Number of extensions: 43290007 Number of successful extensions: 171138 Number of sequences better than 1.0e-05: 16009 Number of HSP's gapped: 145909 Number of HSP's successfully gapped: 16061 Length of query: 619 Length of database: 757,237,578 Length adjustment: 132 Effective length of query: 487 Effective length of database: 398,844,510 Effective search space: 194237276370 Effective search space used: 194237276370 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 129 (54.3 bits)