BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0217.0020.p (326 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00020482.1| hypothetical protein [Chloroflexus aurantiacus] 191 3e-47 gb|EAA60968.1| hypothetical protein AN4890.2 [Aspergillus nidula... 95 3e-18 gb|EAI62399.1| unknown [environmental sequence] 60 7e-08 gb|EAC77905.1| unknown [environmental sequence] 59 1e-07 gb|EAI84046.1| unknown [environmental sequence] 59 1e-07 >ref|ZP_00020482.1| hypothetical protein [Chloroflexus aurantiacus] Length = 248 Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 103/247 (41%), Positives = 144/247 (58%), Gaps = 6/247 (2%) Query: 1 MESFTKVKLDDQQLRALAASTFGTDTAIISSK----ELTGGFFNAAYDLELSDGRSVILK 56 M+S TK Q+ A+ A FG A+ + EL G+FNA Y + L++G+ VILK Sbjct: 1 MKSKTKNTKTRAQIEAMVARAFG-GMALADDEGAVYELKDGWFNAVYSIRLANGQEVILK 59 Query: 57 VAPAAETETLSYEKDIMRAEVEALRLVQAAGTVPVPAVYGFDESLELIPSPFFFMEKIEG 116 +AP + E +SYEK+IM EV +RLV+ +PVP +Y D++ E+ + +FFMEK+ G Sbjct: 60 IAPPPDAEVMSYEKNIMATEVATMRLVRQNPAIPVPNIYFCDDTHEVCDADYFFMEKLAG 119 Query: 117 TPYNEVKGSLPDEVRASIERELGRYQRLINGIKGERFGLFGQPQDTAARTWRETFTAMIH 176 ++ LP A++E ++G R IN +G FG G P D A TW+E F ++ Sbjct: 120 DTLAHMRARLPAATLATLEYQIGTIIREINSFRGTYFGYEGNP-DLRASTWKEAFIRIMD 178 Query: 177 NVLDDGQRLGAVLPASYDEIKQGLEKFLPALEEVTEPRLIHWDLWNGNIFVKDGVIVSII 236 VL+D R SYDEI+ + K ALEEVT P L+HWD W+ N FV+ G IV II Sbjct: 179 AVLEDAARKRVTFDYSYDEIRDVVWKHAAALEEVTIPCLVHWDAWDANFFVQQGRIVGII 238 Query: 237 DWERALW 243 D+ER LW Sbjct: 239 DFERVLW 245 >gb|EAA60968.1| hypothetical protein AN4890.2 [Aspergillus nidulans FGSC A4] Length = 1329 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 11/237 (4%) Query: 37 GFFNAAYDLELSDGRSVILKVAPAAETETLSYEKDIMRAEVEALRLVQAAGTVPVPAVYG 96 G ++ Y ++LS+ ++LK +P T + E ++ E AL L+ +P + Sbjct: 41 GHLHSFYLVQLSNETHLLLKCSPKPTTPLIRREHIMLDTEARALSLLSHMPCIP--QLLH 98 Query: 97 FDESLELIPSPFFFMEKIEGTPYNEVKGSLPDEVRASIERELGRYQRLINGIKGERFGLF 156 +D +L+ F I GT +++ L + R SIER LG + I E FG Sbjct: 99 YDPLGDLLGPSFLLRHYIPGTSLDKIDSQLSIQERDSIERSLGLLAKRIAQHTSESFGSL 158 Query: 157 GQPQDTAA-RTWRETFTAMIHNVLDDGQRLGAVLPASYDEIKQGLEKFLPALEEVTEPRL 215 GQ ++WRE F + +L + + + LP Y EI+ + + PAL+E+ PRL Sbjct: 159 GQVASAGGTKSWREGFLILFEGLLRNAEDVFINLP--YGEIRYQVHRASPALDEILTPRL 216 Query: 216 IHWDLWN-GNIFVKDGV-IVSIIDWERALWGDVLMEYYFRHFEN-SPAFFEGYGAAF 269 + D + V + + I + A+WGDV M + FEN SP+ +G+G+ + Sbjct: 217 VVIDFGQPSQVLVNESKRLCGISSFRTAVWGDVFMA---KIFENPSPSVIDGFGSCY 270 >gb|EAI62399.1| unknown [environmental sequence] Length = 351 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 56/244 (22%), Positives = 111/244 (45%), Gaps = 27/244 (11%) Query: 28 IISSKELTGGFFNAAYDLELSDGRSVILKVAPAAETETLSYEKDIMRAEVEALRLVQAAG 87 I S ++ GG N Y + +D +S++L+ P + ++ D + AL Sbjct: 40 IKSIEQFKGGQSNPTYKI-TTDSKSLVLRRKPPGKLLPSAHAVDREYKVITALYQTD--- 95 Query: 88 TVPVPAVYGFDESLELIPSPFFFMEKIEGTPY-NEVKGSLPDEVRASIERELGRYQRLIN 146 VPVP YG E ++ + FF M+ ++G + + + S+ ++ R I + + ++ Sbjct: 96 -VPVPKTYGLCEDDDVAGTAFFVMDFLDGDLFWDPMIPSVTNKDRTEIYKNKNKTLAKLH 154 Query: 147 GIKGERFGL--FGQPQDTAART---WRETFTAMIHNVLDDGQRLGAVLPASYDEIKQGLE 201 + ++ GL +G+P + AR W + + A N ++ L LP Sbjct: 155 SVDYKKIGLEDYGKPGNYVARQVSRWSKQYRASETNDIEAMNNLIEWLP----------- 203 Query: 202 KFLPALEEVTEPRLIHWDLWNGNIFVKDGVIVSIIDWERALWGDVLME--YYFRHFENSP 259 K +P +E + ++H D N+ +KD ++ I+DWE + G + + Y+ + N Sbjct: 204 KNIPDDDETS---IVHGDYRLDNMILKDNQVIGILDWELSTLGHPIADFSYHCLSWRNQE 260 Query: 260 AFFE 263 AF++ Sbjct: 261 AFWD 264 >gb|EAC77905.1| unknown [environmental sequence] Length = 300 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 28/248 (11%) Query: 25 DTAIISS-KELTGGFFNAAYDLELSDGRSVILKVAPAAETETLSYEKDIMRAEVEALRLV 83 D+ II ++ GG N Y + ++ + +L+ P + ++ D + AL Sbjct: 6 DSGIIEKIEQFKGGQSNPTYKIS-TENNAYVLRRKPPGKLLPKAHAVDREYKVITALYET 64 Query: 84 QAAGTVPVPAVYGFDESLELIPSPFFFMEKIEGTPY-NEVKGSLPDEVRASIERELGRYQ 142 VPVP YG E ++ +PFF ME ++GT Y + + E RA I + + Sbjct: 65 D----VPVPKTYGLCEDDSVVGTPFFLMEYVDGTVYWDHMLPKCSPEERALIYKNKNKVI 120 Query: 143 RLINGIKGERFGL--FGQPQDTAAR---TWRETFTAMIHNVLDDGQRLGAVLPASYDEIK 197 ++ + ++ GL +G+ + AR TW + A +D+ +L LP + Sbjct: 121 ASLHSVDYKKVGLEDYGKSGNYVARQVNTWTRQYLASETENIDEMNKLIEWLPKN----- 175 Query: 198 QGLEKFLPALEEVTEPRLIHWDLWNGNIFVKDGVIVSIIDWERALWGDVLME--YYFRHF 255 + E E ++H D N+ + +V ++DWE + G + + Y+ + Sbjct: 176 ---------IPEDDETSIVHGDFRLDNMIYSNFDVVGVLDWELSTLGHPIADFCYHCLTW 226 Query: 256 ENSPAFFE 263 P F++ Sbjct: 227 RTLPNFYD 234 >gb|EAI84046.1| unknown [environmental sequence] Length = 352 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 25/254 (9%) Query: 6 KVKLDDQQLRALAASTFGTDTAIISSKELTGGFFNAAYDLELSDGRSVILKVAPAAETET 65 +K D L+ I ++ GG N Y + L++ + +L+ P + Sbjct: 21 NLKFDSNLLQEWINDNVKNSGKIEKIEQFKGGQSNPTYKI-LTNNNAYVLRRKPPGKLLP 79 Query: 66 LSYEKDIMRAEVEALRLVQAAGTVPVPAVYGFDESLELIPSPFFFMEKIEGTPY-NEVKG 124 ++ D + AL VPVP YG E ++ +PFF ME ++GT Y + + Sbjct: 80 KAHAVDREYKVITALYETD----VPVPRTYGLCEDDSVVGTPFFLMEYVDGTVYWDHMLP 135 Query: 125 SLPDEVRASIERELGRYQRLINGIKGERFGL--FGQPQDTAAR---TWRETFTAMIHNVL 179 E RA I R ++ + + GL +G+ + AR TW + A + Sbjct: 136 KCSPEERALIYRNKNSVIASLHSVDFKEVGLEDYGKSGNYVARQVNTWTRQYLASETENI 195 Query: 180 DDGQRLGAVLPASYDEIKQGLEKFLPALEEVTEPRLIHWDLWNGNIFVKDGVIVSIIDWE 239 D+ +L LP + + E E ++H D N+ + +V ++DWE Sbjct: 196 DEMNKLIEWLPKN--------------IPEDDETSIVHGDFRLDNMIYSNFDVVGVLDWE 241 Query: 240 RALWGDVLMEYYFR 253 + G + ++ + Sbjct: 242 LSTLGHPIADFCYH 255 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.137 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 479,791,712 Number of extensions: 19876077 Number of successful extensions: 48622 Number of sequences better than 1.0e-05: 19 Number of HSP's gapped: 48638 Number of HSP's successfully gapped: 19 Length of query: 326 Length of database: 757,237,578 Length adjustment: 126 Effective length of query: 200 Effective length of database: 415,135,104 Effective search space: 83027020800 Effective search space used: 83027020800 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)