BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0217.0015.p (413 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00106109.1| COG0304: 3-oxoacyl-(acyl-carrier-protein) syn... 432 e-119 gb|AAN87389.1| 3-oxoacyl-[acyl-carrier-protein] synthase [Heliob... 426 e-118 ref|NP_389016.1| similar to 3-oxoacyl- acyl-carrier protein synt... 424 e-117 ref|ZP_00110115.1| COG0304: 3-oxoacyl-(acyl-carrier-protein) syn... 423 e-117 ref|ZP_00179185.1| hypothetical protein Cwat004101 [Crocosphaera... 415 e-115 >ref|ZP_00106109.1| COG0304: 3-oxoacyl-(acyl-carrier-protein) synthase [Nostoc punctiforme] Length = 416 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 203/409 (49%), Positives = 284/409 (69%) Query: 2 ERVVITGMGLTSPLGNTVDQFWSRLAAGESGISPITTFDTTHFKAKIAGAVQDFDSEGRF 61 +RVV+TG+G +P+GNT ++W L +G +GI IT FD + +IAG V++FD Sbjct: 7 KRVVVTGVGAITPIGNTATEYWDGLLSGRNGIDYITFFDASSHDCRIAGEVKNFDPHDYL 66 Query: 62 GRKEARRMDRFSQFALAAAEDAWAQSGLRLDKIDRERLGVYVGSGVGGIQTLMEQNDVLR 121 RK+A+RMDRF+QF ++AA+ A A + L +++++ E++GV +GSGVGGI+ L +Q + Sbjct: 67 ERKDAKRMDRFAQFGVSAAKQAIANAQLVINELNAEQVGVMIGSGVGGIKVLEDQQTIYL 126 Query: 122 SRGPERISPTLIPMLISNMAAAVISIKLGALGPTLSPVTACSIGNTAIGEAFRLIRYXXX 181 +RGP+R SP +IPM+I+NMAA + +I GA GP PVTAC+ G+ A+G+AFRLI+ Sbjct: 127 NRGPDRCSPFMIPMMIANMAAGLTAIHTGAKGPNSCPVTACAAGSNAVGDAFRLIQGGYA 186 Query: 182 XXXXXXXXXXXXTEISLASFGNATALSTNNDNPHKASRPFDRNRDGFVIGEGSGIVILEA 241 T +S+A F ALS ND+P A RPFDR+R+GF++GEGSGI+ILE Sbjct: 187 KAMICGGTEAAVTPLSMAGFAACKALSFRNDDPAHACRPFDRDRNGFILGEGSGILILEE 246 Query: 242 LSHALRRNAVIYGEVTGYGASSDAYHMVATHPEGIGAYQAMKLALNEAGVTPGEVDVISA 301 L HAL R A IY E+ GYG + DAYH+ + P G+GA +A++LAL +A +TP ++ I+A Sbjct: 247 LQHALSRGAHIYAEMIGYGMTCDAYHITSPVPGGLGAARAIELALKDASITPEQISYINA 306 Query: 302 HATSTLVGDRSETLAIKKLFGDQAYRIPVTANKSMTGHAFGGAGGLEAIALVKSIQEGII 361 H TST D +ET AIKK G+ AY++ +++ KSMTGH GG+GG+EA+A V +I I Sbjct: 307 HGTSTPANDSTETSAIKKALGEHAYKVAISSTKSMTGHLLGGSGGIEAVATVLAIANDQI 366 Query: 362 PPTINLEDPDEECDLDYVPNTARQADINLGISNSFGFGGHNAVIVLRKY 410 PPTINLE+PD ECDLDYVPN +R + + ISNSFGFGGHN + +KY Sbjct: 367 PPTINLENPDPECDLDYVPNYSRVQKVEVAISNSFGFGGHNVTLAFKKY 415 >gb|AAN87389.1| 3-oxoacyl-[acyl-carrier-protein] synthase [Heliobacillus mobilis] Length = 415 Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust. Identities = 208/412 (50%), Positives = 279/412 (67%) Query: 2 ERVVITGMGLTSPLGNTVDQFWSRLAAGESGISPITTFDTTHFKAKIAGAVQDFDSEGRF 61 +RVVITG+G+ SP+G ++FW L +G SGI P+T FD T ++A V+DFD Sbjct: 3 KRVVITGVGVVSPVGTGKEKFWDSLTSGVSGIGPVTRFDATDLPTRVAAEVKDFDPTKFL 62 Query: 62 GRKEARRMDRFSQFALAAAEDAWAQSGLRLDKIDRERLGVYVGSGVGGIQTLMEQNDVLR 121 RKEARRMDRF+Q+A+AA++ A SGL ++K DRER GV +G G+GG++T +Q V+ Sbjct: 63 DRKEARRMDRFAQYAVAASKMAMEDSGLDMEKADRERAGVILGCGIGGMETFEDQAKVMI 122 Query: 122 SRGPERISPTLIPMLISNMAAAVISIKLGALGPTLSPVTACSIGNTAIGEAFRLIRYXXX 181 ++G RISP +PM+ISNMAA IS++L GP+ + VTAC+ A G A RL+++ Sbjct: 123 NKGNGRISPFFVPMMISNMAAGHISMQLNLKGPSETVVTACASATNACGSALRLLQHGDC 182 Query: 182 XXXXXXXXXXXXTEISLASFGNATALSTNNDNPHKASRPFDRNRDGFVIGEGSGIVILEA 241 ++S A F A+ST ND+P KASRPFDR+R GFV+GEG+GI++ E Sbjct: 183 DVVLTGGTEASIIQLSFAGFCAMKAMSTLNDDPAKASRPFDRDRSGFVMGEGAGILVFEE 242 Query: 242 LSHALRRNAVIYGEVTGYGASSDAYHMVATHPEGIGAYQAMKLALNEAGVTPGEVDVISA 301 L HAL R A IY EV GYG+S DAYH+ P G GA +AM+ AL +AG+ P ++D I+A Sbjct: 243 LEHALARGAHIYAEVVGYGSSCDAYHITDPAPNGEGAARAMQGALKDAGLKPEDIDYINA 302 Query: 302 HATSTLVGDRSETLAIKKLFGDQAYRIPVTANKSMTGHAFGGAGGLEAIALVKSIQEGII 361 H T+T D ETLAIK +FGD A ++ +++ KSMTGH G AGG+E IA +I +GII Sbjct: 303 HGTATEKNDYYETLAIKSVFGDHAQKVAISSTKSMTGHLLGAAGGIELIATALAIHDGII 362 Query: 362 PPTINLEDPDEECDLDYVPNTARQADINLGISNSFGFGGHNAVIVLRKYTEG 413 PPTINL++P E CDLDYVP+ AR+ + ISN+FGFGGHNA + L KY G Sbjct: 363 PPTINLDNPGEGCDLDYVPHEARKIPVEAAISNTFGFGGHNATVALCKYRPG 414 >ref|NP_389016.1| similar to 3-oxoacyl- acyl-carrier protein synthase [Bacillus subtilis] pir||G69842 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) - Bacillus subtilis emb|CAB12975.1| beta-ketoacyl-acyl carrier protein synthase II [Bacillus subtilis subsp. subtilis str. 168] Length = 413 Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust. Identities = 203/409 (49%), Positives = 281/409 (68%), Gaps = 1/409 (0%) Query: 2 ERVVITGMGLTSPLGNTVDQFWSRLAAGESGISPITTFDTTHFKAKIAGAVQDFDSEGRF 61 +RVV+TG+G SPLGN VD W+ G SGI PIT D + AK+A ++DF+ E Sbjct: 4 KRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDYM 63 Query: 62 GRKEARRMDRFSQFALAAAEDAWAQSGLRLDKIDRERLGVYVGSGVGGIQTLMEQNDVLR 121 +KEAR+MDRF+Q+A+ AA+ A + L + R+GV+VGSG+GG++TL Q ++ Sbjct: 64 DKKEARKMDRFTQYAVVAAKMAVEDADLNITDEIAPRVGVWVGSGIGGLETLESQFEIFL 123 Query: 122 SRGPERISPTLIPMLISNMAAAVISIKLGALGPTLSPVTACSIGNTAIGEAFRLIRYXXX 181 ++GP R+SP +PM+I +MA ISI LGA G VTAC+ G +IG+AF++I+ Sbjct: 124 TKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKVIQRGDA 183 Query: 182 XXXXXXXXXXXXTEISLASFGNATALSTNNDNPHKASRPFDRNRDGFVIGEGSGIVILEA 241 T +S A F ALSTN D P ASRPFD+NRDGFV+GEG+GI++LE Sbjct: 184 DVMVTGGTEAPLTRMSFAGFSANKALSTNPD-PKTASRPFDKNRDGFVMGEGAGIIVLEE 242 Query: 242 LSHALRRNAVIYGEVTGYGASSDAYHMVATHPEGIGAYQAMKLALNEAGVTPGEVDVISA 301 L HAL R A IYGE+ GYG++ DAYH+ A +G G +AM+ A+ +AG+ P E+D I+A Sbjct: 243 LEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPEEIDYINA 302 Query: 302 HATSTLVGDRSETLAIKKLFGDQAYRIPVTANKSMTGHAFGGAGGLEAIALVKSIQEGII 361 H TST D+ ET+AIK +FG+ A+++ V++ KSMTGH G AGG+EAI + +I+EG+I Sbjct: 303 HGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAGGIEAIFSILAIKEGVI 362 Query: 362 PPTINLEDPDEECDLDYVPNTARQADINLGISNSFGFGGHNAVIVLRKY 410 PPTIN++ PDEECDLDYVP+ AR+ ++N +SNS GFGGHNA ++ +KY Sbjct: 363 PPTINIQTPDEECDLDYVPDEARRQELNYVLSNSLGFGGHNATLIFKKY 411 >ref|ZP_00110115.1| COG0304: 3-oxoacyl-(acyl-carrier-protein) synthase [Nostoc punctiforme] Length = 424 Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust. Identities = 205/413 (49%), Positives = 279/413 (67%) Query: 1 MERVVITGMGLTSPLGNTVDQFWSRLAAGESGISPITTFDTTHFKAKIAGAVQDFDSEGR 60 + RVV+TGMG +PLGNT+ ++W L AG SGI IT FD + +IAG V+DF+ Sbjct: 6 IRRVVVTGMGAITPLGNTIKEYWEGLIAGRSGIDLITQFDASLHICRIAGEVRDFNPYDY 65 Query: 61 FGRKEARRMDRFSQFALAAAEDAWAQSGLRLDKIDRERLGVYVGSGVGGIQTLMEQNDVL 120 RK+ + + RF+QF ++A+ A A +G ++ + ++GV VG+G+GG+ T+ EQ VL Sbjct: 66 LERKDVKHISRFAQFGISASLQAIADAGFEINDSNATQVGVIVGNGMGGLYTVEEQEKVL 125 Query: 121 RSRGPERISPTLIPMLISNMAAAVISIKLGALGPTLSPVTACSIGNTAIGEAFRLIRYXX 180 ++G +R SP +PM I+NMAA +I+I GA GP V+AC+ G AIGEAFR I+ Sbjct: 126 LTQGSKRCSPFTVPMTIANMAAGLIAIYTGAKGPNFCTVSACAAGGNAIGEAFRSIQLGH 185 Query: 181 XXXXXXXXXXXXXTEISLASFGNATALSTNNDNPHKASRPFDRNRDGFVIGEGSGIVILE 240 T +S+A+FG+A LST N+ P +ASRPFDR+R+GFV+GEG+GI+ LE Sbjct: 186 ALGMICGGTEAVITPLSIAAFGSAKTLSTANEEPTRASRPFDRDRNGFVMGEGAGILFLE 245 Query: 241 ALSHALRRNAVIYGEVTGYGASSDAYHMVATHPEGIGAYQAMKLALNEAGVTPGEVDVIS 300 L HAL R A IY E+ GYG + DAYHM A P G G +AM+LAL + G+ P EV I+ Sbjct: 246 ELEHALGRGAKIYAEIVGYGLTCDAYHMTAPTPSGEGVMRAMELALKDGGIFPNEVSYIN 305 Query: 301 AHATSTLVGDRSETLAIKKLFGDQAYRIPVTANKSMTGHAFGGAGGLEAIALVKSIQEGI 360 AH TSTL D ETLAIKK GD+A++IP+++ KSMTGH G AGG+EA+A VKS+ + Sbjct: 306 AHGTSTLANDAIETLAIKKALGDRAFQIPISSTKSMTGHLLGAAGGIEAVATVKSVALDL 365 Query: 361 IPPTINLEDPDEECDLDYVPNTARQADINLGISNSFGFGGHNAVIVLRKYTEG 413 IPPTINLE PD CDLDYVP+ +R +++ +SNSFGFGGHN + +K+ G Sbjct: 366 IPPTINLEQPDPNCDLDYVPHKSRTQRVDVALSNSFGFGGHNVSLAFKKFELG 418 >ref|ZP_00179185.1| hypothetical protein Cwat004101 [Crocosphaera watsonii WH 8501] Length = 407 Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust. Identities = 208/406 (51%), Positives = 284/406 (69%) Query: 5 VITGMGLTSPLGNTVDQFWSRLAAGESGISPITTFDTTHFKAKIAGAVQDFDSEGRFGRK 64 ++TG+G +P+GNT+ +W L G+SGI+ IT FD + +IAG V+ FD + RK Sbjct: 1 MVTGLGAITPIGNTLTDYWQGLMNGKSGIAEITNFDPSKHACRIAGEVKGFDPQDYLDRK 60 Query: 65 EARRMDRFSQFALAAAEDAWAQSGLRLDKIDRERLGVYVGSGVGGIQTLMEQNDVLRSRG 124 EA+RMDRF+QF ++A+ A A S L ++ ++ E++GV +G+GVGGI+ L +Q +V ++G Sbjct: 61 EAKRMDRFAQFGVSASLQALADSKLVINDLNAEQIGVIIGTGVGGIKVLEDQQEVYLNKG 120 Query: 125 PERISPTLIPMLISNMAAAVISIKLGALGPTLSPVTACSIGNTAIGEAFRLIRYXXXXXX 184 P R SP +IPM+I NMA+ + +I GA GP VTAC+ G+ AIG+AFRL++ Sbjct: 121 PSRCSPFMIPMMIGNMASGLTAINTGAKGPNTCTVTACAAGSNAIGDAFRLVQRGYAKAM 180 Query: 185 XXXXXXXXXTEISLASFGNATALSTNNDNPHKASRPFDRNRDGFVIGEGSGIVILEALSH 244 T +SLA F +A ALST ND P KASRPFD++RDGFV+GEGSGI+ILE L H Sbjct: 181 ICGGTEASVTPLSLAGFASARALSTRNDEPQKASRPFDKDRDGFVMGEGSGILILEELEH 240 Query: 245 ALRRNAVIYGEVTGYGASSDAYHMVATHPEGIGAYQAMKLALNEAGVTPGEVDVISAHAT 304 AL R A IYGE+ GY + DAYHM A P+G GA +AM+LAL + G++P +V I+AH T Sbjct: 241 ALARGATIYGEMVGYAMTCDAYHMTAPVPDGAGATRAMELALKDGGISPEQVTYINAHGT 300 Query: 305 STLVGDRSETLAIKKLFGDQAYRIPVTANKSMTGHAFGGAGGLEAIALVKSIQEGIIPPT 364 ST D +ET AIKK GD+AY I V++ KSMTGH GG+GG+EA+A + +I IPPT Sbjct: 301 STAANDVTETKAIKKALGDRAYAIAVSSTKSMTGHLLGGSGGIEAVATLMAIANDRIPPT 360 Query: 365 INLEDPDEECDLDYVPNTARQADINLGISNSFGFGGHNAVIVLRKY 410 +NL++PD +CDLDYVP +R +I++ +SNSFGFGGHN +V RKY Sbjct: 361 LNLDNPDPDCDLDYVPYESRPLEIDVALSNSFGFGGHNVTLVFRKY 406 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.134 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 582,751,686 Number of extensions: 23794081 Number of successful extensions: 66770 Number of sequences better than 1.0e-05: 2328 Number of HSP's gapped: 60777 Number of HSP's successfully gapped: 2620 Length of query: 413 Length of database: 757,237,578 Length adjustment: 128 Effective length of query: 285 Effective length of database: 409,704,906 Effective search space: 116765898210 Effective search space used: 116765898210 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 127 (53.5 bits)