BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0210.0002.p
         (66 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_242921.1| BH2055~unknown conserved protein in others [Bac...    77   9e-14
gb|EAA71997.1| hypothetical protein FG08797.1 [Gibberella zeae P...    54   8e-07

>ref|NP_242921.1| BH2055~unknown conserved protein in others [Bacillus halodurans]
 pir||G83906 hypothetical protein BH2055 [imported] - Bacillus halodurans
          (strain C-125)
 dbj|BAB05774.1| BH2055~unknown conserved protein in others [Bacillus halodurans]
          Length = 657

 Score = 77.4 bits (189), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 46/62 (74%)

Query: 1  MFREENGRLIREYDHERVWIEPWGEHSLRIRASYAEITDEQWALLPAVQTLSHISITKER 60
          MF+ +  RL+REYD E++WIEPWG+ +LR+RASY  I D  WALLP  +  + IS+T+E 
Sbjct: 1  MFKIDGSRLVREYDSEKLWIEPWGKDALRVRASYTAIEDTDWALLPVKEMEADISLTEET 60

Query: 61 AT 62
          AT
Sbjct: 61 AT 62


>gb|EAA71997.1| hypothetical protein FG08797.1 [Gibberella zeae PH-1]
          Length = 663

 Score = 54.3 bits (129), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)

Query: 1  MFREENGRLIREYDHERVWIEPWGEHSLRIRAS-YAEITDEQWALLPAVQTLSHISITKE 59
          MF ++  RL  +YD E VWIEPWG ++ R+RA+  A+++ E WAL    +    ISI+++
Sbjct: 1  MFFDDKTRLRYKYDAEDVWIEPWGPNAFRVRATKSAKMSSEDWALQQLKEITPKISISED 60

Query: 60 RAT 62
           AT
Sbjct: 61 SAT 63


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.319    0.132    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 93,942,189
Number of extensions: 2752840
Number of successful extensions: 6033
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 6032
Number of HSP's successfully gapped: 2
Length of query: 66
Length of database: 757,237,578
Length adjustment: 37
Effective length of query: 29
Effective length of database: 656,778,915
Effective search space: 19046588535
Effective search space used: 19046588535
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 120 (50.8 bits)