BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0207.0012.p (202 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_655177.1| hypothetical protein predicted by GeneMark [Bac... 135 4e-31 ref|NP_831061.1| Spore coat-associated protein N [Bacillus cereu... 134 1e-30 ref|NP_693450.1| spore coat-associated protein [Oceanobacillus i... 127 2e-28 ref|NP_691586.1| spore coat-associated protein [Oceanobacillus i... 125 5e-28 ref|NP_655179.1| hypothetical protein predicted by GeneMark [Bac... 122 7e-27 >ref|NP_655177.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_843759.1| spore coat-associated protein [Bacillus anthracis str. Ames] gb|AAP25245.1| spore coat-associated protein [Bacillus anthracis str. Ames] Length = 195 Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 85/158 (53%), Positives = 97/158 (61%), Gaps = 11/158 (6%) Query: 42 GTLDLNSDPSVIVDIQNLKPGDTVTKTFKLKNDGTLDIGSILLKTTTEVTDTLGDNNGVD 101 GTLDL +PS +V++ NLKPGDTV K FKL+N GTLDI +LLKT V D DN D Sbjct: 42 GTLDLALNPSTVVNVSNLKPGDTVEKEFKLENKGTLDIKKVLLKTDYNVEDVKKDNKD-D 100 Query: 102 LSKFIKVKFLKNNDKGTIISPEVVVYETTLDALKGQTPDLVKN--TGWDQILTEADGIKA 159 K IKV FLKN DK E +V ET LD LKG T V N W + GI A Sbjct: 101 FGKHIKVTFLKNVDK-----HETIVKETALDKLKGDTLTAVNNDLAAW---FWDEKGISA 152 Query: 160 QSSDSFSVKFEFVDTGEAQNYFQKDKLKLTWNFEAKQG 197 SD F VKFEFVD + QN FQ DKL+LTW F+A+QG Sbjct: 153 GKSDKFKVKFEFVDNKKDQNEFQGDKLQLTWTFDAQQG 190 >ref|NP_831061.1| Spore coat-associated protein N [Bacillus cereus ATCC 14579] gb|AAP08262.1| Spore coat-associated protein N [Bacillus cereus ATCC 14579] Length = 197 Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/157 (52%), Positives = 98/157 (62%), Gaps = 11/157 (7%) Query: 42 GTLDLNSDPSVIVDIQNLKPGDTVTKTFKLKNDGTLDIGSILLKTTTEVTDTLGDNNGVD 101 GTLDL +PS +V++ NLKPGDT+ K FKL+N G+LDI +LLKT V D DN D Sbjct: 44 GTLDLELNPSTVVNVSNLKPGDTIEKEFKLENKGSLDIKKVLLKTDYNVEDVKKDNKD-D 102 Query: 102 LSKFIKVKFLKNNDKGTIISPEVVVYETTLDALKGQTPDLVKN--TGWDQILTEADGIKA 159 K IKV FLKN DK E +V +TTLD LKG T V N + W + GI A Sbjct: 103 FGKHIKVTFLKNVDK-----HETIVKQTTLDKLKGDTLTAVDNDLSAW---FWDEKGISA 154 Query: 160 QSSDSFSVKFEFVDTGEAQNYFQKDKLKLTWNFEAKQ 196 SD F VKFEFVD G+ QN FQ DKL+L W F+A+Q Sbjct: 155 GKSDKFKVKFEFVDNGKDQNQFQGDKLQLNWTFDAQQ 191 >ref|NP_693450.1| spore coat-associated protein [Oceanobacillus iheyensis HTE831] dbj|BAC14485.1| spore coat-associated protein [Oceanobacillus iheyensis HTE831] Length = 209 Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 76/165 (46%), Positives = 101/165 (61%), Gaps = 13/165 (7%) Query: 42 GTLDLNSDPSVIVDIQNLKPGDTVTKTFKLKNDGTLDIGSILLKTTTEVTDTLGDNNGVD 101 G L L+++PSV++D+ NLKPGDT+ ++F+L NDGTLDI + + +T+ V D +G NN D Sbjct: 42 GELSLSAEPSVVIDVNNLKPGDTMIRSFELLNDGTLDISKVDI-STSYVVDDVGGNNSED 100 Query: 102 LSKFIKVKFLKNNDKGTIISP--------EVVVYETTLDALKGQTPDLVKNTG--WDQIL 151 K I+V FL+N DK T P +V+ Y TTL LK TPD V+N W Sbjct: 101 FGKHIRVNFLENVDK-TGFDPIFWDYDHNDVISY-TTLYDLKNMTPDAVENLNKWWTIFK 158 Query: 152 TEADGIKAQSSDSFSVKFEFVDTGEAQNYFQKDKLKLTWNFEAKQ 196 EA G++A +SD V FEFV+ G QN +QKD L LTW F Q Sbjct: 159 GEASGLEAGTSDEMLVSFEFVENGADQNEYQKDSLNLTWTFTGHQ 203 >ref|NP_691586.1| spore coat-associated protein [Oceanobacillus iheyensis HTE831] dbj|BAC12621.1| spore coat-associated protein [Oceanobacillus iheyensis HTE831] Length = 196 Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 72/160 (45%), Positives = 97/160 (60%), Gaps = 6/160 (3%) Query: 42 GTLDLNSDPSVIVDIQNLKPGDTVTKTFKLKNDGTLDIGSILLKTTTEVTDTLGDNNGVD 101 GTLDL+ DP+ I+ I NLKPGDT+ + F L N G+L I ++ L+T V D+ DN D Sbjct: 42 GTLDLSVDPTAIIQIDNLKPGDTMLREFSLSNAGSLKIENVFLETNYSVLDSNNDNTD-D 100 Query: 102 LSKFIKVKFLKNNDKGTIISPEVVVYETTLDALKGQTPDLVKNTGWDQILTEADGIKAQS 161 K +KV FL N D+ + P V+ETTL LK PD+VK WD + + G++A+ Sbjct: 101 FGKHVKVNFLWNWDQES--EP---VFETTLYELKEMDPDVVKRDIWDPLWEQHGGLEAEE 155 Query: 162 SDSFSVKFEFVDTGEAQNYFQKDKLKLTWNFEAKQGPKKD 201 + F V+FEFVD GE QN +Q D L+L W F A Q +D Sbjct: 156 THDFWVEFEFVDDGEDQNDYQGDSLELEWIFNATQSSGQD 195 >ref|NP_655179.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_843760.1| spore coat-associated protein, putative [Bacillus anthracis str. Ames] gb|AAP25246.1| spore coat-associated protein, putative [Bacillus anthracis str. Ames] Length = 197 Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 75/155 (48%), Positives = 91/155 (58%), Gaps = 5/155 (3%) Query: 42 GTLDLNSDPSVIVDIQNLKPGDTVTKTFKLKNDGTLDIGSILLKTTTEVTDTLGDNNGVD 101 GTLDL DP +VDI++LKPGD+V K F LKN G+L I + L T V D GDN G D Sbjct: 42 GTLDLTLDPKTLVDIKDLKPGDSVKKEFLLKNSGSLTIKDVKLATKYTVKDVKGDNAGED 101 Query: 102 LSKFIKVKFLKNNDKGTIISPEVVVYETTLDALKGQTPDLVKNTGWDQILTEADGIKAQS 161 K +KVKFL N DK + P VYETTL L+ PDL+ + E G++A + Sbjct: 102 FGKHVKVKFLWNWDKQS--EP---VYETTLADLQKTDPDLLAQDIFAPEWGEKGGLEAGT 156 Query: 162 SDSFSVKFEFVDTGEAQNYFQKDKLKLTWNFEAKQ 196 D V+FEFVD G+ QN FQ D L L W F A Q Sbjct: 157 EDYLWVQFEFVDDGKDQNIFQGDSLNLEWTFNANQ 191 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.311 0.133 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 250,413,020 Number of extensions: 9856084 Number of successful extensions: 22729 Number of sequences better than 1.0e-05: 19 Number of HSP's gapped: 22702 Number of HSP's successfully gapped: 19 Length of query: 202 Length of database: 757,237,578 Length adjustment: 120 Effective length of query: 82 Effective length of database: 431,425,698 Effective search space: 35376907236 Effective search space used: 35376907236 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 123 (52.0 bits)