BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0001.p (121 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_390455.1| similar to arsenate reductase [Bacillus subtili... 217 6e-56 emb|CAD56680.1| ArsC protein [Bacillus megaterium] 208 4e-53 ref|NP_243864.1| arsenate reductase [Bacillus halodurans] >gi|17... 196 2e-49 ref|NP_693344.1| arsenate reductase [Oceanobacillus iheyensis HT... 193 9e-49 ref|ZP_00097745.1| COG0394: Protein-tyrosine-phosphatase [Desulf... 184 4e-46 >ref|NP_390455.1| similar to arsenate reductase [Bacillus subtilis] sp|P45947|ARSC_BACSU Arsenate reductase (Arsenical pump modifier) pir||C69950 arsenate reductase homolog yqcM - Bacillus subtilis pdb|1JL3|A Chain A, Crystal Structure Of B. Subtilis Arsc pdb|1JL3|B Chain B, Crystal Structure Of B. Subtilis Arsc pdb|1JL3|C Chain C, Crystal Structure Of B. Subtilis Arsc pdb|1JL3|D Chain D, Crystal Structure Of B. Subtilis Arsc dbj|BAA06970.1| ORF109 [Bacillus subtilis] dbj|BAA12434.1| YqcM [Bacillus subtilis] emb|CAB14519.1| arsenate reductase [Bacillus subtilis subsp. subtilis str. 168] Length = 139 Score = 217 bits (553), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 99/121 (81%), Positives = 110/121 (90%) Query: 1 MAEGWAKKYLSDEWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADLV 60 MAEGWAK+YL DEWKVYSAGIEAHGLNP AVKAM EVGIDIS QTSDIID +L NADLV Sbjct: 19 MAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLV 78 Query: 61 ITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFAETG 120 +TLCGDAADKCP+TPP V+REHWGFDDPA+AQGT+EEKWA FQRVRD++G R+K FAETG Sbjct: 79 VTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETG 138 Query: 121 E 121 + Sbjct: 139 K 139 >emb|CAD56680.1| ArsC protein [Bacillus megaterium] Length = 140 Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 95/122 (77%), Positives = 109/122 (89%), Gaps = 1/122 (0%) Query: 1 MAEGWAKKYLSD-EWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADL 59 MAEGWAKKYL++ EW V SAG+EAHGLNP AVKAM E G+DIS QTSD+IDP++L NADL Sbjct: 19 MAEGWAKKYLNNNEWDVRSAGLEAHGLNPNAVKAMKEAGVDISNQTSDVIDPEILNNADL 78 Query: 60 VITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFAET 119 V+TLCG AAD CPVTPP V+REHWGFDDPAKA+GTDEEKWA FQRVRD++ ERI+RFAET Sbjct: 79 VVTLCGHAADHCPVTPPHVKREHWGFDDPAKAEGTDEEKWAFFQRVRDEIAERIQRFAET 138 Query: 120 GE 121 G+ Sbjct: 139 GK 140 >ref|NP_243864.1| arsenate reductase [Bacillus halodurans] sp|Q9K8K8|ARSC_BACHD Arsenate reductase (Arsenical pump modifier) pir||F84024 arsenate reductase arsC [imported] - Bacillus halodurans (strain C-125) dbj|BAB06717.1| arsenate reductase [Bacillus halodurans] Length = 139 Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 92/121 (76%), Positives = 102/121 (84%) Query: 1 MAEGWAKKYLSDEWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADLV 60 MAEGW KKYL DEW VYSAGIEAHG+NP AVKAM E+GIDIS QTSD ID +LL ADLV Sbjct: 19 MAEGWGKKYLGDEWDVYSAGIEAHGVNPNAVKAMKEIGIDISEQTSDTIDQELLQKADLV 78 Query: 61 ITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFAETG 120 +TLCG AAD CP TP R HWGFDDPAKA+GTDEEKWAVF+RVRD++G+RIK FAETG Sbjct: 79 VTLCGHAADVCPATPSNKERVHWGFDDPAKAEGTDEEKWAVFRRVRDEIGKRIKTFAETG 138 Query: 121 E 121 + Sbjct: 139 K 139 >ref|NP_693344.1| arsenate reductase [Oceanobacillus iheyensis HTE831] dbj|BAC14379.1| arsenate reductase [Oceanobacillus iheyensis HTE831] Length = 139 Score = 193 bits (491), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 88/121 (72%), Positives = 103/121 (85%) Query: 1 MAEGWAKKYLSDEWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADLV 60 MAEGW KK L +EW VYSAGIEAHGLNP A+KAM EV IDI+ QTSD ID +L AD V Sbjct: 19 MAEGWGKKILGEEWDVYSAGIEAHGLNPNAIKAMREVDIDITNQTSDQIDKDILNKADFV 78 Query: 61 ITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFAETG 120 +TLCGDA DKCP+TPP V+R+HWGF+DPAKAQGT+EEKW VFQ+VRD++G+RIK FA+TG Sbjct: 79 VTLCGDAKDKCPMTPPHVKRDHWGFEDPAKAQGTEEEKWTVFQQVRDKIGDRIKVFAKTG 138 Query: 121 E 121 E Sbjct: 139 E 139 >ref|ZP_00097745.1| COG0394: Protein-tyrosine-phosphatase [Desulfitobacterium hafniense] Length = 144 Score = 184 bits (468), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 80/117 (68%), Positives = 101/117 (86%) Query: 1 MAEGWAKKYLSDEWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADLV 60 MAEG+ KKYL D++KVYSAG+EAHGLNPKAV+ M EVG+DIS QTSDI+DP +L AD V Sbjct: 19 MAEGFGKKYLGDQYKVYSAGVEAHGLNPKAVEVMAEVGVDISEQTSDILDPAILSQADHV 78 Query: 61 ITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFA 117 ITLCGDA D+CP+ PP V+R+HWGFDDPA+A+G++EE+ F+RVRD++ ERIK+FA Sbjct: 79 ITLCGDAKDRCPIAPPHVKRDHWGFDDPAQAEGSEEERMITFRRVRDEIEERIKKFA 135 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.315 0.134 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 200,304,554 Number of extensions: 8015109 Number of successful extensions: 13957 Number of sequences better than 1.0e-05: 180 Number of HSP's gapped: 13931 Number of HSP's successfully gapped: 180 Length of query: 121 Length of database: 757,237,578 Length adjustment: 85 Effective length of query: 36 Effective length of database: 526,454,163 Effective search space: 18952349868 Effective search space used: 18952349868 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 120 (50.8 bits)