BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0009.p (786 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00069513.1| COG1554: Trehalose and maltose hydrolases (po... 583 e-165 ref|NP_466355.1| similar to a maltose phosphorylase [Listeria mo... 551 e-155 ref|NP_472292.1| similar to a maltose phosphorylase [Listeria in... 545 e-153 ref|NP_753692.1| Hypothetical transport protein ycjT [Escherichi... 543 e-153 ref|NP_415832.1| hypothetical protein b1316 [Escherichia coli K1... 532 e-149 >ref|ZP_00069513.1| COG1554: Trehalose and maltose hydrolases (possible phosphorylases) [Oenococcus oeni MCW] Length = 578 Score = 583 bits (1504), Expect = e-165, Method: Compositional matrix adjust. Identities = 289/584 (49%), Positives = 391/584 (66%), Gaps = 10/584 (1%) Query: 6 IQIMLNYNKTLPDGASGWVVTEERFSNLALAKCEAVMALGNGYMGLRSAAEESYVGEKRN 65 ++ ++ Y + P W++ E F N L+KCE+V ALGNGY+G+RSA EE+Y+GEKR+ Sbjct: 2 MKTLIEYQQNQP-----WIIKENSFDNNFLSKCESVFALGNGYLGVRSAFEENYIGEKRD 56 Query: 66 LFVNGTFNRFDELEVSELPNAADVTRMDIRIDGKCFSLDQGEVKAYSRSLNLREAELVRT 125 +FV+GTF+RFD+ EV+ELPN D +M+ I+G+ L+ GE+ YS SLNL+ +L+R Sbjct: 57 MFVSGTFDRFDKSEVTELPNVPDFIQMEFVINGRNLDLNLGEITQYSFSLNLKTGQLIRH 116 Query: 126 FIWNSGDGKELEFTFRRFVSLDQLHLIGLKLEVKVLRGPVHLSVASGIDAQVSNSGSQHF 185 FIW D LEF FRRFVS D LHL+G ++ ++ L + SGID Q++NSGSQHF Sbjct: 117 FIWKFAD-IHLEFNFRRFVSFDDLHLLGQEVTIRNLGADTSFQLKSGIDGQLTNSGSQHF 175 Query: 186 HEGEKRIYDKTFLELIQTTTESKVDFVIGASHKLKVDGGTVDLAPAMEIDRRKVAVAYSL 245 EG K L+++ TT +S++DFV H D +D +EI RR++ Y Sbjct: 176 AEGTKDQEKNRILQMVSTTAQSRIDFVQSTIHDFS-DRSLID-KTRIEISRRQIHKLYWF 233 Query: 246 NLEEGQTLTLDKVAAVYTSRDKQFAGNYSLPAMRAEVLDVLKTAHESGYETLFSKHAAAW 305 +L+ +++ + K++ VYTS D+ ++ M + +VL + G++ L K A AW Sbjct: 234 HLKSNRSIKISKLSNVYTSIDRDL-NQKTVEYMISVSANVLNFDVQKGFDYLLKKSALAW 292 Query: 306 A-KVWENYGITIESGNPFDLLGVRFALYHLVAMTPAHDNRMGIGAKGLSGEGYKGHSFWD 364 KVW ++ I I+S + D L + FA YHL M P HD RM I AKGLSGEGYKGH+ WD Sbjct: 293 EEKVWRDFPIEIKSIDFTDQLALNFARYHLHIMVPKHDGRMSIAAKGLSGEGYKGHTAWD 352 Query: 365 TEIFILPFYIYSNPQIARSLLEYRYLGLEGARSKAKENGYAGAMYPWEAAWPSDGEVTPV 424 T+IF+LP++ + P+IAR LL YRYLGL GA KA N Y GA YPWE+AWPS+GEV PV Sbjct: 353 TDIFMLPYFTMTYPEIARKLLTYRYLGLSGAHKKAALNHYQGAQYPWESAWPSNGEVAPV 412 Query: 425 WGAVDIVTGEQTKIWSGFIEQHITSDIAYAVWHYFRATGDVDFMEDYGYEIIFDTAVFWA 484 WGA DIVTG+ TKIWSGFIEQHI+SD+A+ V Y AT D+ F + GYE+IFDTA FW Sbjct: 413 WGAADIVTGKPTKIWSGFIEQHISSDVAFGVKQYIDATSDLRFAKFEGYEMIFDTAKFWV 472 Query: 485 SRLEWNEAQGRYEINEVVGPDEYKEHVDNNAFTNYMAHFNIELAMQYYKELEQNQPELFA 544 SRLE+N + RYEIN VVGPDEYKEHV+NNAFTNY A +NI A++ Y++++Q + F Sbjct: 473 SRLEYNAVKDRYEINNVVGPDEYKEHVNNNAFTNYSAAWNISTAIKVYEKIKQQDSKSFD 532 Query: 545 RYNKLLNLHEAYGIWESKLDLIYLPQPNERLIIPQDDTYLQKEI 588 R NK L L + Y W+ KL +YLP+ N+ I+PQDD+YL K+ Sbjct: 533 RLNKKLGLDKTYRQWKEKLPKLYLPKANKDKILPQDDSYLSKKF 576 >ref|NP_466355.1| similar to a maltose phosphorylase [Listeria monocytogenes EGD-e] pir||AH1428 a maltose phosphorylase homolog lmo2833 [imported] - Listeria monocytogenes (strain EGD-e) emb|CAD01046.1| lmo2833 [Listeria monocytogenes] Length = 725 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 299/756 (39%), Positives = 425/756 (56%), Gaps = 46/756 (6%) Query: 25 VTEERFSNLALAKCEAVMALGNGYMGLRSAAEESYVGEKRNLFVNGTFNRFDELEVSELP 84 + E+ FS L K + M +GNGY+G+R A EE Y + R ++V G +NR SEL Sbjct: 4 IIEKEFSLNYLNKYGSQMTVGNGYLGVRGALEEEYPEQVRGMYVAGIYNRPSGSMSSELV 63 Query: 85 NAADVTRMDIRIDGKCFSLDQGEVKAYSRSLNLREAELVRTFIWNSGDGKELEFTFRRFV 144 N DVTR + +DG+ FS+ G++ AY R L++ ELVR W S GK+ + F RFV Sbjct: 64 NLPDVTRFQVLLDGETFSMQAGKIHAYERYLDMHTGELVRKITWESSAGKKYQLNFYRFV 123 Query: 145 SLDQLHLIGLKLEVKVLRGPVHLSVASGIDAQVSNSGSQHFHEGEKRIYDKTFLELIQTT 204 S H+I K+E+ L G + V +GIDAQ +N G+Q E RI+D+ + T Sbjct: 124 SKATKHVIAAKVEIMPLSGGAKVKVKTGIDAQQTNFGTQQLAESSLRIFDEKLMVGEYET 183 Query: 205 TESKVDFVIGASHKLKVDGGTVDLAPAMEIDRRKVAVAYSLNLEEGQTLTLDKVAAVYTS 264 ESK I KV+ + A R++ + E Q TL+K++ V TS Sbjct: 184 IESKQHITIAT----KVNKKGIFTAK-----NRQLMTEVEQEIAENQLFTLEKISMVKTS 234 Query: 265 RDKQFAGNYSLPAMRAEVLDVLKTAHESGYETLFSKHAAAWAKVWENYGITIESGNPFDL 324 D+ + AE+ + + ETL WA WE+ G+ +ES N FD Sbjct: 235 LDQ----------VDAELPNTTYAELKRASETL-------WADFWEHAGVRVESTNDFDQ 277 Query: 325 LGVRFALYHLVAMTPAHDNRMGIGAKGLSGEGYKGHSFWDTEIFILPFYIYSNPQIARSL 384 + FA YHL MTP D R +GAKGL+GEGYKGH FWDTEIFI+PF++Y+ P+IA+ L Sbjct: 278 FALDFACYHLEIMTPKDDFRCSVGAKGLTGEGYKGHVFWDTEIFIMPFFLYNKPEIAKQL 337 Query: 385 LEYRYLGLEGARSKAKENGYAGAMYPWEAAWPSDGEVTPVWGAVDIVTGEQTKIWSGFIE 444 L+YRYL L+ A+ KA +NGY GA++PWE+A+ D E TP + A++I TG + K+ S E Sbjct: 338 LKYRYLHLKEAKEKATKNGYNGALFPWESAFSGDEE-TPEFAAINIRTGTRQKVASAISE 396 Query: 445 QHITSDIAYAVWHYFRATGDVDFMEDYGYEIIFDTAVFWASRLEWNEAQGRYEINEVVGP 504 H+ +DIAYAV Y AT D FM++ G E++ +TA FW SR GR EI +V+GP Sbjct: 397 HHLVADIAYAVCEYEAATKDAQFMKECGSELLLETAEFWLSRA--TNRNGRLEILDVIGP 454 Query: 505 DEYKEHVDNNAFTNYMAHFNIELAMQYYKELEQNQPELFARYNKLLNLHEAYGIWESKLD 564 DEY EH+DNN +TNYMAH+N+E A+ + K + + AR E+ L+ Sbjct: 455 DEYTEHIDNNTYTNYMAHYNVEKALAWNK----DNADFVARA-------------EAFLE 497 Query: 565 LIYLPQPNERLIIPQDDTYLQKEIIDLTPYKDQEKVGSIFNDYNLDQVGNMQISKQADIM 624 IYLP NE +IPQDDT+L+K+ I+L YK + I DY+ +V +QI KQAD++ Sbjct: 498 KIYLPVANESGLIPQDDTFLEKDWINLDKYKAAQGTQGILLDYSRQEVNELQILKQADLV 557 Query: 625 MLFFLLENKFSPEVKRANYDYYEEKXXXXXXXXXXXXXXXXXDFGDKTLAYRLFQRATEI 684 MLF+L F+P+ + N DYYE++ G++ AY+ FQ A I Sbjct: 558 MLFYLFPKMFAPDAVKQNLDYYEKRTIHDSSLSKAIHAIVENRTGNRAQAYQFFQEACLI 617 Query: 685 DLGPKVHSSDAGIHAASLGGIWECAVMGFAGVRMLDGQLHLAPKLPEHWDKLAFPLYWQG 744 DLG + HSSD G+HAASLG IW V GF G+ L +AP LP W + F W+G Sbjct: 618 DLGSEPHSSDDGLHAASLGAIWLAVVFGFVGIDTSGELLEIAPNLPGEWQSVVFEFSWKG 677 Query: 745 QRLEISITPQEISICSTAGQPVSLFVHGQLQEVQST 780 +++ + I P + + + + L ++G+ ++ T Sbjct: 678 EKILVEIAPNTLQLSKSTKSVLELVIYGEKHQLTDT 713 >ref|NP_472292.1| similar to a maltose phosphorylase [Listeria innocua] pir||AG1802 maltose phosphorylase homolog lin2966 [imported] - Listeria innocua (strain Clip11262) emb|CAC98191.1| lin2966 [Listeria innocua] Length = 725 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 298/756 (39%), Positives = 422/756 (55%), Gaps = 46/756 (6%) Query: 25 VTEERFSNLALAKCEAVMALGNGYMGLRSAAEESYVGEKRNLFVNGTFNRFDELEVSELP 84 + E+ F+ L K + M +GNGY+G+R A EE Y + R ++V G +NR SEL Sbjct: 4 IIEKEFALNYLNKYGSQMTVGNGYLGVRGALEEEYPEQVRGMYVAGIYNRPSGSVSSELV 63 Query: 85 NAADVTRMDIRIDGKCFSLDQGEVKAYSRSLNLREAELVRTFIWNSGDGKELEFTFRRFV 144 N DVTR + +DG+ FS+ G+V Y R L++ ELVR IW + G + + F RF Sbjct: 64 NLPDVTRFQVTLDGEVFSMQAGKVHGYERFLDMNTGELVRKIIWENSAGDKYQLNFYRFA 123 Query: 145 SLDQLHLIGLKLEVKVLRGPVHLSVASGIDAQVSNSGSQHFHEGEKRIYDKTFLELIQTT 204 S H+I ++E+ L G + + +GIDAQ +N G+Q E RI+D+ + T Sbjct: 124 SKVVKHVIAARVEITPLNGCAKVKIKTGIDAQQTNFGTQQLAESSLRIFDEELMVGEYET 183 Query: 205 TESKVDFVIGASHKLKVDGGTVDLAPAMEIDRRKVAVAYSLNLEEGQTLTLDKVAAVYTS 264 ESK + KV V A R++ + QT L+K++ V TS Sbjct: 184 IESKQRITVAT----KVSQKGVFTAK-----NRQLMTEVEQEIAANQTFALEKISLVKTS 234 Query: 265 RDKQFAGNYSLPAMRAEVLDVLKTAHESGYETLFSKHAAAWAKVWENYGITIESGNPFDL 324 D+ +DV + +E+ Y L + AWA WE+ G+ +ES N FD Sbjct: 235 LDE---------------VDV-EFPNET-YAELKANSEKAWADFWEHAGVRVESTNDFDQ 277 Query: 325 LGVRFALYHLVAMTPAHDNRMGIGAKGLSGEGYKGHSFWDTEIFILPFYIYSNPQIARSL 384 + FA YHL MTP D R +GAKGL+GEGYKGH FWDTEIFI+PF++Y+ P+IA+ L Sbjct: 278 FALDFACYHLEIMTPKDDFRCSVGAKGLTGEGYKGHVFWDTEIFIMPFFLYNKPEIAKQL 337 Query: 385 LEYRYLGLEGARSKAKENGYAGAMYPWEAAWPSDGEVTPVWGAVDIVTGEQTKIWSGFIE 444 LEYRYL L+ A+ KA +NGY GA+YPWE+A+ + E TP + A++I TG + K+ S E Sbjct: 338 LEYRYLHLKEAKEKALKNGYNGALYPWESAFSGEEE-TPEFAAINIRTGTRQKVASAISE 396 Query: 445 QHITSDIAYAVWHYFRATGDVDFMEDYGYEIIFDTAVFWASRLEWNEAQGRYEINEVVGP 504 H+ +DIAYAV Y ATGD FM D G E++ +TA FW SR GR EI +V+GP Sbjct: 397 HHLVADIAYAVCEYEAATGDAQFMSDCGAELLLETAEFWISRA--TNRNGRLEILDVIGP 454 Query: 505 DEYKEHVDNNAFTNYMAHFNIELAMQYYKELEQNQPELFARYNKLLNLHEAYGIWESKLD 564 DEY EH+DNN +TNYMAH+N+++A+++ ++ E Q A L Sbjct: 455 DEYTEHIDNNTYTNYMAHYNVKMALEWNRDNEAFQSRAKAFLKNL--------------- 499 Query: 565 LIYLPQPNERLIIPQDDTYLQKEIIDLTPYKDQEKVGSIFNDYNLDQVGNMQISKQADIM 624 YLP NE+ +IPQDDT+LQK+ I+L YK + I DY+ +V +QI KQAD++ Sbjct: 500 --YLPVANEKGLIPQDDTFLQKDWINLDKYKAAQGTQGILLDYSRQEVNELQILKQADLV 557 Query: 625 MLFFLLENKFSPEVKRANYDYYEEKXXXXXXXXXXXXXXXXXDFGDKTLAYRLFQRATEI 684 MLF+L F PE + N DYYE++ G++ AY+ FQ A I Sbjct: 558 MLFYLFPQMFPPETVKKNLDYYEKRTIHDSSLSKAIHAIVENRTGNREQAYQFFQEACLI 617 Query: 685 DLGPKVHSSDAGIHAASLGGIWECAVMGFAGVRMLDGQLHLAPKLPEHWDKLAFPLYWQG 744 DLG + HSSD G+HAASLG IW V GFAG+ L +AP LP+ W + F W+G Sbjct: 618 DLGDEPHSSDDGLHAASLGAIWLAVVFGFAGIDTSGELLEIAPDLPDAWRFVKFEFMWKG 677 Query: 745 QRLEISITPQEISICSTAGQPVSLFVHGQLQEVQST 780 + + + I P + + + L ++G+ Q++ T Sbjct: 678 ETILVEIAPNTLQLSKNTKSMLELVIYGEKQQLTDT 713 >ref|NP_753692.1| Hypothetical transport protein ycjT [Escherichia coli CFT073] gb|AAN80254.1| Hypothetical transport protein ycjT [Escherichia coli CFT073] Length = 755 Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust. Identities = 295/761 (38%), Positives = 434/761 (57%), Gaps = 30/761 (3%) Query: 24 VVTEERFSNLALAKCEAVMALGNGYMGLRSAAEESYVGEKRNLFVNGTFNRFDELEVSEL 83 +TE FS L K ++MA GNGY+GLR++ EE Y + R +++ G ++R + E++EL Sbjct: 6 TLTEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINEL 65 Query: 84 PNAADVTRMDIRIDGKCFSLDQGEVKAYSRSLNLREAELVRTFIWNSGDGKELEFTFRRF 143 N DV M+I I+G+ FSL + +A+ R LN EL R +W + +G T RRF Sbjct: 66 VNLPDVVGMEIAINGEIFSLSR---EAWQRELNFASGELRRNVVWRTSNGAGYTITSRRF 122 Query: 144 VSLDQLHLIGLKLEVKVLRGPVHLSVASGIDAQVSNSGSQHFHEGEKRIYDKTFLELIQT 203 VS DQL LI L++ + L + +++GIDA +N G QH E + R++ + ++ I T Sbjct: 123 VSADQLPLIALEITITPLDADALVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGIYT 182 Query: 204 TTESKVDFVIGASHKLKVDGGTVDLAPAMEIDRRKVAVAYSLNLEEGQTLTLDKVAAVYT 263 T + + D I KV G D+ R++ L G+TLTL K + Sbjct: 183 TQDGRSDVAISCC--CKVSG---DVQQCYTAKERRLLQHTCAQLHAGETLTLQKRVWIDW 237 Query: 264 SRDKQFAGNYSLPAMRAEVLDVLKTAHESGYETLFSKHAAAWAKVWENYGITIESGNPFD 323 D+Q A L + L L+ + Y+ L + W + W+ IT+ G+ D Sbjct: 238 RDDRQAA----LDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKRRITVNGGDAHD 293 Query: 324 LLGVRFALYHLVAMTPAHDNRMGIGAKGLSGEGYKGHSFWDTEIFILPFYIYSNPQIARS 383 + +ALYHL MTPAHD R I AKGL+GEGYKGH FWDTE+F+LPF+++S+P +ARS Sbjct: 294 QQALDYALYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARS 353 Query: 384 LLEYRYLGLEGARSKAKENGYAGAMYPWEAAWPSDGEVTPVWGAVDIVTGEQTKIWSGFI 443 LL YR+ L GA+ KA+ NG+ GA++PWE+A S E TP + A++I TG + K+ S Sbjct: 354 LLRYRWHNLPGAQEKARRNGWQGALFPWESA-RSGEEETPEFAAINIRTGLRQKVASAQA 412 Query: 444 EQHITSDIAYAVWHYFRATGDVDFMEDYGYEIIFDTAVFWASRLEWNEAQGRYEINEVVG 503 E H+ +DIA+AV Y+R TGD F+ G ++ +TA FW SR R EI++V+G Sbjct: 413 EHHLVADIAWAVIQYWRTTGDESFIAHEGMALLLETAKFWISRAV--RVNDRLEIHDVIG 470 Query: 504 PDEYKEHVDNNAFTNYMAHFNIELAMQYYKELEQNQPELFARYNKLLNLHEAYGIWESKL 563 PDEY EHV+NNAFT+YMA++N++ A+ ++ + R E L Sbjct: 471 PDEYTEHVNNNAFTSYMAYYNVQQALNIARQFGCSDDAFIHRA-------------EMYL 517 Query: 564 DLIYLPQPNERLIIPQDDTYLQKEIIDLTPYKDQEKVGSIFNDYNLDQVGNMQISKQADI 623 + LP+ ++PQDD+++ K +I+L YK +I DY+ +V MQI KQAD+ Sbjct: 518 KELLLPEIQPDGVLPQDDSFMAKPVINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADV 577 Query: 624 MMLFFLLENKFSPEVKRANYDYYEEKXXXXXXXXXXXXXXXXXDFGDKTLAYRLFQRATE 683 +ML ++L +FS AN +YE + G T +Y+ ++ TE Sbjct: 578 VMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTE 637 Query: 684 IDLGPKVHSSDAGIHAASLGGIWECAVMGFAGVRMLDGQLHLAPKLPEHWDKLAFPLYWQ 743 IDLG HS D GIHAA+ G IW A+ GFAGV + DG+LHL P LPE W +L+FPL+WQ Sbjct: 638 IDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQ 697 Query: 744 GQRLEISITPQEISICSTAGQPVSLFVHGQLQEVQSTAIFA 784 G L++++ Q I+I ++A PVSL ++GQL V ++F Sbjct: 698 GCELQVTLDAQRIAIRTSA--PVSLRLNGQLISVAEESVFC 736 >ref|NP_415832.1| hypothetical protein b1316 [Escherichia coli K12] sp|P77154|YCJT_ECOLI Hypothetical glycosyl hydrolase ycjT pir||G64880 ycjT protein - Escherichia coli (strain K-12) dbj|BAA14891.1| ATH1 protein. [Escherichia coli] dbj|BAA14898.1| ATH1 protein. [Escherichia coli] gb|AAC74398.1| orf, hypothetical protein [Escherichia coli K12] Length = 755 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 288/761 (37%), Positives = 431/761 (56%), Gaps = 30/761 (3%) Query: 24 VVTEERFSNLALAKCEAVMALGNGYMGLRSAAEESYVGEKRNLFVNGTFNRFDELEVSEL 83 ++E FS L K ++MA GNGY+GLR++ EE Y + R +++ G ++R + E++EL Sbjct: 6 TLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINEL 65 Query: 84 PNAADVTRMDIRIDGKCFSLDQGEVKAYSRSLNLREAELVRTFIWNSGDGKELEFTFRRF 143 N DV M+I I+G+ FSL +A+ R L+ EL R +W + +G RRF Sbjct: 66 VNLPDVVGMEIAINGEVFSLSH---EAWQRELDFASGELRRNVVWRTSNGSGYTIASRRF 122 Query: 144 VSLDQLHLIGLKLEVKVLRGPVHLSVASGIDAQVSNSGSQHFHEGEKRIYDKTFLELIQT 203 VS DQL LI L++ + L + +++GIDA +N G QH E + R++ + ++ T Sbjct: 123 VSADQLPLIALEITITPLDADASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGSYT 182 Query: 204 TTESKVDFVIGASHKLKVDGGTVDLAPAMEIDRRKVAVAYSLNLEEGQTLTLDKVAAVYT 263 T + + D I KV G D+ R++ S L G+T+TL K+ + Sbjct: 183 TQDGRSDVAISCC--CKVSG---DVQQCYTAKERRLLQHTSAQLHAGETMTLQKLVWIDW 237 Query: 264 SRDKQFAGNYSLPAMRAEVLDVLKTAHESGYETLFSKHAAAWAKVWENYGITIESGNPFD 323 D+Q A L + L L+ + Y+ L + W + W+ IT+ G D Sbjct: 238 RDDRQAA----LDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKRRITVNGGEAHD 293 Query: 324 LLGVRFALYHLVAMTPAHDNRMGIGAKGLSGEGYKGHSFWDTEIFILPFYIYSNPQIARS 383 + +ALYHL MTPAHD R I AKGL+GEGYKGH FWDTE+F+LPF+++S+P +ARS Sbjct: 294 QQALDYALYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARS 353 Query: 384 LLEYRYLGLEGARSKAKENGYAGAMYPWEAAWPSDGEVTPVWGAVDIVTGEQTKIWSGFI 443 LL YR+ L GA+ KA+ NG+ GA++PWE+A S E TP + A++I TG + K+ S Sbjct: 354 LLRYRWHNLPGAQEKARRNGWQGALFPWESA-RSGEEETPEFAAINIRTGLRQKVASAQA 412 Query: 444 EQHITSDIAYAVWHYFRATGDVDFMEDYGYEIIFDTAVFWASRLEWNEAQGRYEINEVVG 503 E H+ +DIA+AV Y++ TGD F+ G ++ +TA FW SR R EI++V+G Sbjct: 413 EHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAV--RVNDRLEIHDVIG 470 Query: 504 PDEYKEHVDNNAFTNYMAHFNIELAMQYYKELEQNQPELFARYNKLLNLHEAYGIWESKL 563 PDEY EHV+NNA+T+YMA +N++ A+ ++ + R E L Sbjct: 471 PDEYTEHVNNNAYTSYMARYNVQQALNIARQFGCSDDAFIHRA-------------EMFL 517 Query: 564 DLIYLPQPNERLIIPQDDTYLQKEIIDLTPYKDQEKVGSIFNDYNLDQVGNMQISKQADI 623 +++P+ ++PQDD+++ K I+L YK +I DY+ +V MQI KQAD+ Sbjct: 518 KELWMPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADV 577 Query: 624 MMLFFLLENKFSPEVKRANYDYYEEKXXXXXXXXXXXXXXXXXDFGDKTLAYRLFQRATE 683 +ML ++L +FS AN +YE + G T +Y+ ++ TE Sbjct: 578 VMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTE 637 Query: 684 IDLGPKVHSSDAGIHAASLGGIWECAVMGFAGVRMLDGQLHLAPKLPEHWDKLAFPLYWQ 743 IDLG HS D GIHAA+ G IW A+ GFAGV + DG+LHL P LPE W +L+FPL+WQ Sbjct: 638 IDLGADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQ 697 Query: 744 GQRLEISITPQEISICSTAGQPVSLFVHGQLQEVQSTAIFA 784 G L++++ Q I+I ++A PVSL ++GQL V ++F Sbjct: 698 GCELQVTLDAQRIAIRTSA--PVSLRLNGQLITVAEESVFC 736 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.136 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,188,711,961 Number of extensions: 51561836 Number of successful extensions: 114948 Number of sequences better than 1.0e-05: 89 Number of HSP's gapped: 114487 Number of HSP's successfully gapped: 93 Length of query: 786 Length of database: 757,237,578 Length adjustment: 134 Effective length of query: 652 Effective length of database: 393,414,312 Effective search space: 256506131424 Effective search space used: 256506131424 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)