BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0178.0010.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAE17912.1| unknown [environmental sequence] 163 9e-40 gb|EAJ93965.1| unknown [environmental sequence] 163 2e-39 gb|EAD98360.1| unknown [environmental sequence] 162 2e-39 gb|EAJ77243.1| unknown [environmental sequence] 161 4e-39 gb|EAE18305.1| unknown [environmental sequence] 161 5e-39 >gb|EAE17912.1| unknown [environmental sequence] Length = 246 Score = 163 bits (413), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 80/132 (60%), Positives = 97/132 (73%) Query: 3 YQTDTADVLALHQVSLDIAKGEFVSLLGPSGCGKTTLLRLMADLLTPTGGDVTVAGKSAR 62 +QT V A+ + LDI KG+F+SL+GPSGCGKTTLLRL+ADL PTGG + V G S Sbjct: 17 FQTADGPVHAISDIDLDINKGDFISLIGPSGCGKTTLLRLIADLEKPTGGMLRVNGISPE 76 Query: 63 EARLAQKYGIVFQSPVLYDWRKVRHNITLPLELMGVKKSIREDKALELLDLVGLQGFADK 122 EARL + YG VFQSP LY WR V N+ LPLE+MGV K+ +E +A E L++V L GF K Sbjct: 77 EARLNRDYGYVFQSPALYPWRTVAGNLKLPLEIMGVDKNDQEIRAREALEMVDLAGFEKK 136 Query: 123 YPWQLSGGMQQR 134 +PWQLSGGMQQR Sbjct: 137 FPWQLSGGMQQR 148 >gb|EAJ93965.1| unknown [environmental sequence] Length = 261 Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 79/132 (59%), Positives = 97/132 (73%) Query: 3 YQTDTADVLALHQVSLDIAKGEFVSLLGPSGCGKTTLLRLMADLLTPTGGDVTVAGKSAR 62 +QT V A+ + L+I KG+F+SL+GPSGCGKTTLLRL+ADL PTGG + V G S Sbjct: 17 FQTADGPVHAISDIDLEINKGDFISLIGPSGCGKTTLLRLIADLEKPTGGMLRVNGISPE 76 Query: 63 EARLAQKYGIVFQSPVLYDWRKVRHNITLPLELMGVKKSIREDKALELLDLVGLQGFADK 122 EARL + YG VFQSP LY WR V N+ LPLE+MGV K+ +E +A E L++V L GF K Sbjct: 77 EARLNRDYGYVFQSPALYPWRTVDGNLKLPLEIMGVDKNDQEKRAREALEMVDLAGFEKK 136 Query: 123 YPWQLSGGMQQR 134 +PWQLSGGMQQR Sbjct: 137 FPWQLSGGMQQR 148 >gb|EAD98360.1| unknown [environmental sequence] Length = 219 Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 79/132 (59%), Positives = 97/132 (73%) Query: 3 YQTDTADVLALHQVSLDIAKGEFVSLLGPSGCGKTTLLRLMADLLTPTGGDVTVAGKSAR 62 +QT V AL + L+I KG+F+SL+GPSGCGKTTLLRL+ADL PTGG + V G S Sbjct: 17 FQTADGPVHALSDIDLEINKGDFISLIGPSGCGKTTLLRLIADLEKPTGGMLKVNGISPE 76 Query: 63 EARLAQKYGIVFQSPVLYDWRKVRHNITLPLELMGVKKSIREDKALELLDLVGLQGFADK 122 EARL + YG VFQSP LY WR V N+ LPLE+MGV+K+ + +A E L++V L GF K Sbjct: 77 EARLNRDYGYVFQSPALYPWRTVDGNLKLPLEIMGVEKADQNKRAREALEMVDLTGFEKK 136 Query: 123 YPWQLSGGMQQR 134 +PWQLSGGMQQR Sbjct: 137 FPWQLSGGMQQR 148 >gb|EAJ77243.1| unknown [environmental sequence] Length = 266 Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 74/132 (56%), Positives = 97/132 (73%) Query: 3 YQTDTADVLALHQVSLDIAKGEFVSLLGPSGCGKTTLLRLMADLLTPTGGDVTVAGKSAR 62 +QT + V AL +V+L+I +G+F+S +GPSGCGKTTLLR++ADL PTGG + V G S Sbjct: 22 FQTRDSPVHALSEVNLEIRRGDFISFIGPSGCGKTTLLRVIADLEKPTGGSIVVNGVSPE 81 Query: 63 EARLAQKYGIVFQSPVLYDWRKVRHNITLPLELMGVKKSIREDKALELLDLVGLQGFADK 122 +ARL + YG VFQSP L+ WR V N+ LPLE+MG+ + R +A E L +V L+GF K Sbjct: 82 QARLQRAYGYVFQSPALFPWRTVEGNLKLPLEIMGIDAAERTRRAKESLKMVNLEGFEKK 141 Query: 123 YPWQLSGGMQQR 134 +PWQLSGGMQQR Sbjct: 142 FPWQLSGGMQQR 153 >gb|EAE18305.1| unknown [environmental sequence] Length = 261 Score = 161 bits (407), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 73/132 (55%), Positives = 97/132 (73%) Query: 3 YQTDTADVLALHQVSLDIAKGEFVSLLGPSGCGKTTLLRLMADLLTPTGGDVTVAGKSAR 62 +QT + V AL +++L+I +G+F+S +GPSGCGKTTLLR++ADL PTGG + V G S Sbjct: 22 FQTRDSPVHALSEINLEIRRGDFISFIGPSGCGKTTLLRVIADLEKPTGGSIVVNGVSTE 81 Query: 63 EARLAQKYGIVFQSPVLYDWRKVRHNITLPLELMGVKKSIREDKALELLDLVGLQGFADK 122 +ARL + YG VFQSP L+ WR V N+ LPLE+MG+ + R +A E L +V L+GF K Sbjct: 82 QARLQRAYGYVFQSPALFPWRTVEGNLKLPLEIMGIDAAERTRRAKESLKMVNLEGFEKK 141 Query: 123 YPWQLSGGMQQR 134 +PWQLSGGMQQR Sbjct: 142 FPWQLSGGMQQR 153 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.136 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 227,220,238 Number of extensions: 8638643 Number of successful extensions: 76440 Number of sequences better than 1.0e-05: 10330 Number of HSP's gapped: 69477 Number of HSP's successfully gapped: 10535 Length of query: 154 Length of database: 757,237,578 Length adjustment: 112 Effective length of query: 42 Effective length of database: 453,146,490 Effective search space: 19032152580 Effective search space used: 19032152580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 120 (50.8 bits)