BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0175.0010.p (199 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_831722.1| Nitroreductase family protein [Bacillus cereus ... 280 1e-74 ref|NP_833125.1| Nitroreductase family protein [Bacillus cereus ... 279 3e-74 ref|NP_978351.1| conserved hypothetical protein [Bacillus cereus... 277 1e-73 ref|NP_655813.1| Nitroreductase, Nitroreductase family [Bacillus... 276 1e-73 ref|NP_845727.1| conserved hypothetical protein [Bacillus anthra... 274 1e-72 >ref|NP_831722.1| Nitroreductase family protein [Bacillus cereus ATCC 14579] gb|AAP08923.1| Nitroreductase family protein [Bacillus cereus ATCC 14579] Length = 200 Score = 280 bits (716), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 128/199 (64%), Positives = 160/199 (80%) Query: 1 MSKNFLEAVKGRRSIYAISKESPVSDAEIQEIVEAAVLHSPTSFNSQSSRAVVLLGDKHD 60 M+K+F A++ RRSIYAISKE VSD +IQE++ AV H+P++FNSQS+R VVLLG++HD Sbjct: 2 MAKDFYSAIEDRRSIYAISKEQVVSDEKIQEVIYHAVKHTPSAFNSQSARVVVLLGEQHD 61 Query: 61 KVWDITADTLRKIVPTEQFEGTAQKLASFKAGYGTVLFFEDQAVVKHLQENFALYAENFP 120 K+WDIT +TLRKIVP F T +K+ +FK+GYGTVL+FED VV+ LQ NFALY +NFP Sbjct: 62 KLWDITKETLRKIVPENNFAPTEEKMNAFKSGYGTVLYFEDSEVVESLQANFALYKDNFP 121 Query: 121 IWSNQSSGILQFVVWTAFAEAGLGASLQHYNPLIDDEVKATFDIPADWKLIAQMPFGKTV 180 WS QSSG+LQF +WTA G GA+LQHYNPLID+EV+ +D+PA+WKLIAQMPFGK V Sbjct: 122 TWSQQSSGMLQFAIWTALEIEGFGATLQHYNPLIDEEVRKEWDVPANWKLIAQMPFGKPV 181 Query: 181 TAPGEKEFQPIEERVKVIK 199 GEKEFQP+E RVK+ K Sbjct: 182 VQAGEKEFQPLENRVKIYK 200 >ref|NP_833125.1| Nitroreductase family protein [Bacillus cereus ATCC 14579] gb|AAP10326.1| Nitroreductase family protein [Bacillus cereus ATCC 14579] Length = 199 Score = 279 bits (713), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 131/199 (65%), Positives = 159/199 (79%) Query: 1 MSKNFLEAVKGRRSIYAISKESPVSDAEIQEIVEAAVLHSPTSFNSQSSRAVVLLGDKHD 60 M+K+F A+K RR+ Y I+KE VSD +I+EIVE AV ++P++FNSQ++R VVL G+ HD Sbjct: 1 MTKDFYTALKERRTYYGINKEVQVSDEKIKEIVEFAVKYTPSAFNSQTARLVVLFGEAHD 60 Query: 61 KVWDITADTLRKIVPTEQFEGTAQKLASFKAGYGTVLFFEDQAVVKHLQENFALYAENFP 120 K+WDIT +TLRK+V F GT QK+ SFKAGYGTVLFFED+A+VK LQE FA YAENFP Sbjct: 61 KLWDITTETLRKVVGDGDFSGTQQKMDSFKAGYGTVLFFEDEAIVKSLQEKFAAYAENFP 120 Query: 121 IWSNQSSGILQFVVWTAFAEAGLGASLQHYNPLIDDEVKATFDIPADWKLIAQMPFGKTV 180 IWS Q+SG+ Q VVWT GLGASLQHYNPLIDDE+K +++PA+WKLIAQMPFG Sbjct: 121 IWSYQASGMHQLVVWTGLEAEGLGASLQHYNPLIDDEIKQEWNVPANWKLIAQMPFGNPT 180 Query: 181 TAPGEKEFQPIEERVKVIK 199 APGEKEFQP+EERVK K Sbjct: 181 AAPGEKEFQPLEERVKFHK 199 >ref|NP_978351.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gb|AAS40959.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 199 Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 126/199 (63%), Positives = 158/199 (79%) Query: 1 MSKNFLEAVKGRRSIYAISKESPVSDAEIQEIVEAAVLHSPTSFNSQSSRAVVLLGDKHD 60 M+K+F A++ RRSIYAISKE VSD +IQE++ AV H+P++FNSQS+R VVLLG++HD Sbjct: 1 MAKDFYSAIEDRRSIYAISKEQVVSDEKIQEVIYHAVKHTPSAFNSQSARVVVLLGEQHD 60 Query: 61 KVWDITADTLRKIVPTEQFEGTAQKLASFKAGYGTVLFFEDQAVVKHLQENFALYAENFP 120 K+WDIT +TLRKIVP T +K+ +FK+GYGTVL+FED VV+ LQE FALY ENFP Sbjct: 61 KLWDITKETLRKIVPENNLASTEEKMNAFKSGYGTVLYFEDSEVVEQLQEKFALYKENFP 120 Query: 121 IWSNQSSGILQFVVWTAFAEAGLGASLQHYNPLIDDEVKATFDIPADWKLIAQMPFGKTV 180 IWS QSSG+LQF +WTA G GA+LQHYNPLID+EV+ + +P +WKLIAQMPFGK V Sbjct: 121 IWSQQSSGMLQFAIWTALEIEGFGATLQHYNPLIDEEVRKEWGVPENWKLIAQMPFGKPV 180 Query: 181 TAPGEKEFQPIEERVKVIK 199 GEKE+QP+E RVK+ K Sbjct: 181 VPAGEKEYQPLENRVKIYK 199 >ref|NP_655813.1| Nitroreductase, Nitroreductase family [Bacillus anthracis A2012] ref|NP_844360.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gb|AAP25846.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 199 Score = 276 bits (707), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 127/199 (63%), Positives = 158/199 (79%) Query: 1 MSKNFLEAVKGRRSIYAISKESPVSDAEIQEIVEAAVLHSPTSFNSQSSRAVVLLGDKHD 60 M+K+F A++ RRSIYAISKE VSD +IQE++ AV H+P++FNSQS+R VVLLG++HD Sbjct: 1 MAKDFYSAIEDRRSIYAISKEQVVSDEKIQEVIYHAVKHTPSAFNSQSARVVVLLGEQHD 60 Query: 61 KVWDITADTLRKIVPTEQFEGTAQKLASFKAGYGTVLFFEDQAVVKHLQENFALYAENFP 120 K+WDIT +TLRKIVP F T +K+ +FK+GYGTVL+FED VV+ LQENFALY +NFP Sbjct: 61 KLWDITKETLRKIVPENNFASTEEKMNAFKSGYGTVLYFEDNQVVEELQENFALYKDNFP 120 Query: 121 IWSNQSSGILQFVVWTAFAEAGLGASLQHYNPLIDDEVKATFDIPADWKLIAQMPFGKTV 180 IWS QSSG+LQF +WTA G GA+LQHYNPLID+EV+ +++P WKLIAQMPFGK V Sbjct: 121 IWSQQSSGMLQFAIWTALEIEGFGATLQHYNPLIDEEVRKEWEVPESWKLIAQMPFGKPV 180 Query: 181 TAPGEKEFQPIEERVKVIK 199 GEKEFQP+E VK K Sbjct: 181 VPAGEKEFQPLENCVKFYK 199 >ref|NP_845727.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gb|AAP27213.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 199 Score = 274 bits (700), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 129/199 (64%), Positives = 158/199 (79%) Query: 1 MSKNFLEAVKGRRSIYAISKESPVSDAEIQEIVEAAVLHSPTSFNSQSSRAVVLLGDKHD 60 M+K+F A+K RR+ Y I+KE V D +I+EIVE AV ++P++FNSQ++R VVL G+ H+ Sbjct: 1 MTKDFYTALKERRTYYGINKEVQVLDEKIKEIVEFAVKYTPSAFNSQTARLVVLFGEAHN 60 Query: 61 KVWDITADTLRKIVPTEQFEGTAQKLASFKAGYGTVLFFEDQAVVKHLQENFALYAENFP 120 K+WDIT +TLRK+V F GT QK+ SFKAGYGTVLFFED+A+VK LQE FA YAENFP Sbjct: 61 KLWDITTETLRKVVGDGDFSGTQQKMDSFKAGYGTVLFFEDEAIVKSLQEKFAAYAENFP 120 Query: 121 IWSNQSSGILQFVVWTAFAEAGLGASLQHYNPLIDDEVKATFDIPADWKLIAQMPFGKTV 180 IWS+Q+SG+ Q VVWT GLGASLQHYNPLIDDEVK +++PA+WK IAQMPFG Sbjct: 121 IWSHQASGMHQLVVWTGLEAEGLGASLQHYNPLIDDEVKQEWNVPANWKRIAQMPFGNPT 180 Query: 181 TAPGEKEFQPIEERVKVIK 199 APGEKEFQP+EERVK K Sbjct: 181 AAPGEKEFQPLEERVKFHK 199 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.132 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 290,345,964 Number of extensions: 11172843 Number of successful extensions: 28511 Number of sequences better than 1.0e-05: 36 Number of HSP's gapped: 28483 Number of HSP's successfully gapped: 36 Length of query: 199 Length of database: 757,237,578 Length adjustment: 119 Effective length of query: 80 Effective length of database: 434,140,797 Effective search space: 34731263760 Effective search space used: 34731263760 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 123 (52.0 bits)