BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0166.0002.p (1064 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00182528.1| hypothetical protein Exigu215101 [Exiguobacte... 281 5e-74 ref|ZP_00183265.1| hypothetical protein Exigu132101 [Exiguobacte... 266 3e-69 ref|ZP_00182898.1| hypothetical protein Exigu173601 [Exiguobacte... 254 8e-66 ref|ZP_00183296.1| hypothetical protein Exigu128901 [Exiguobacte... 241 6e-62 ref|ZP_00183750.1| hypothetical protein Exigu085701 [Exiguobacte... 236 2e-60 >ref|ZP_00182528.1| hypothetical protein Exigu215101 [Exiguobacterium sp. 255-15] Length = 847 Score = 281 bits (720), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 181/522 (34%), Positives = 286/522 (54%), Gaps = 25/522 (4%) Query: 407 TVMLERYNQLNHELTYTLDKQEFAGKFSRFMNQIYAFDSS----LFFLVKDKI--AVVKG 460 T+ E++ + +ELT TL +E + + ++ A S L FL + + + G Sbjct: 326 TLRSEQHLKYRNELTETLASRETLTAYPEIIEKLVAITHSEIGALLFLDQHDVRSTIEYG 385 Query: 461 VPQEKVEQYXXXXXXXXXXXXKEEKSYIVKRTGSPREQGISPDEVLCYDFY-----TSVV 515 + +E V Q ++ ++KR +Q ++ D L Y +Y ++ Sbjct: 386 MTEEMVGQLVKDDQSLF------HRARVLKRPVHSSKQ-VAHDSPLPYPYYMYEVAVPIL 438 Query: 516 GGNDE-ILAVFCGSRIGHAFTEEEISEIQGLASRVALAIERIMMYEEIEHGRKLNQDIVN 574 N+E I+A R AFT E++ +I + +++L++ R+ +YE++ H + ++N Sbjct: 439 DPNEEQIIACVYLVRYRDAFTPEQMGDILSFSHQLSLSLMRMGIYEKMMHEKNKTGQLLN 498 Query: 575 NVNEGIQFVNTEGVMQHINKALSQLF---HYEWAEGS-LIPAEAWLDAFTGKSNESAELR 630 ++ E + ++ E +N+ L +LF E+ + S L + A + +E Sbjct: 499 SIREAVVYIEHESDELLVNEPLMKLFPEVQTEYQDDSNLSSFRQAMSALSAIIDEPEPFE 558 Query: 631 SFYENAIAESALDSSTMKYSLGKEEIQHVDVYAIPVLRREDRIGTLFVHRDITREYELDV 690 + E I E L ++ S+ + ++ +YA + + +GT+ V RD+T+E E D Sbjct: 559 QYIEQ-IVEQNLPKDSLLVSI-RSHSAYIQIYAEKIQINQVWVGTMLVLRDVTKETEADR 616 Query: 691 MKSELVSTVSHELRTPLSSVLGFTELLLSKTMKPEKQLKYLETIHKEAKRLTELINDFLD 750 MK E VSTVSHELRTPLSS+ GFTEL+L++ + P KQ KYL TIH E RLT L+NDFLD Sbjct: 617 MKEEFVSTVSHELRTPLSSIYGFTELMLNREIDPPKQRKYLTTIHSETGRLTTLVNDFLD 676 Query: 751 LQRMESGTQQYNVEPAHLSEIVLGVIDQYKLSSTHHILFEDEAVHDEVAVDRDKIVQVLT 810 +QRMES Q+Y + L ++ +ID + S T H L + + D +KI Q+L Sbjct: 677 VQRMESSEQRYQMATFDLVQLAAELIDFHDASHTTHELSFEAVGPIMIDADAEKIKQLLN 736 Query: 811 NLLSNAIKFSPGSHEVKVMLHNEPGRILVRIQDQGLGIPKNQIGQLFQKFRRVDNSASKR 870 NLLSNAIK+SP V + + N G + I+DQG+GIP+ + +LF KF RVDNS +++ Sbjct: 737 NLLSNAIKYSPDGGNVAIRIENHDGFAEITIRDQGIGIPQEAMSKLFDKFYRVDNSETRK 796 Query: 871 IGGTGLGLAICKEIIEKHKGTIGIDSVEGEGSTVWFSLPVQV 912 IGGTGLGL+ICKEI++ H GTI ++S G GST P+ V Sbjct: 797 IGGTGLGLSICKEIVKHHNGTIDVESTIGAGSTFTIRFPIAV 838 >ref|ZP_00183265.1| hypothetical protein Exigu132101 [Exiguobacterium sp. 255-15] Length = 532 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 158/409 (38%), Positives = 238/409 (58%), Gaps = 25/409 (6%) Query: 516 GGNDEILAVFCGSRIGHAFTEEEISEIQGLASRVALAIERIMMYEEIEHGRKLNQDIVNN 575 DEI+A R+ H F +E E+ A ++AL++ R+ ++EI R+ ++N+ Sbjct: 129 ASTDEIIAYIYLMRLHHPFDPQEQEELAAFARQLALSLLRMRTFDEIGREREKTARLLNS 188 Query: 576 VNEGIQFVNTEGVMQHINKALSQLFHYEWAEGSLIPAEAWL----DAFTGKSNESAELRS 631 + E I ++ +G +Q IN+ L LF + A S WL D+ T N +L Sbjct: 189 IRESIVYIEPDGPIQLINRPLLDLFDHPSAVDS---KAEWLIEIDDSITYLKNRVDQLSE 245 Query: 632 FYENAIAESALDSST---MKYSLGKEEIQHVDVYAIPVLRREDRIGTLFVHRDITREYEL 688 F E + ++ ++ T + +S+ +E+ + + Y+ + G L V RD+T E E+ Sbjct: 246 F-ERYLHQTFINRETGEGITFSIDREK-RFIKTYSEEIHYGGKFRGILLVLRDVTNEVEI 303 Query: 689 DVMKSELVSTVSHELRTPLSSVLGFTELLLSKTMKPEKQLKYLETIHKEAKRLTELINDF 748 D +K+ELVST+SHELRTPLSS+ GFTEL++ + + P +Q KYL +H E +RL+ LINDF Sbjct: 304 DRIKNELVSTISHELRTPLSSIYGFTELMIQRDLPPHRQKKYLAAVHSETERLSLLINDF 363 Query: 749 LDLQRMESGTQQYNVEPAHLSEIVLGVIDQYKLSSTHHILFEDEAVHDEVAV-----DRD 803 LDLQRME+ Q+Y EP L L ++ K + D + E V D Sbjct: 364 LDLQRMEANRQEYTFEPFDL----LAMMKDLKQLHSLSSSSHDIRIFSEETVQIINGDSK 419 Query: 804 KIVQVLTNLLSNAIKFSP--GSHEVKVMLHNEPGRILVRIQDQGLGIPKNQIGQLFQKFR 861 KI Q+ NL++NAIK+SP G E++V HN R+ V + D G+GIP + + +LFQKF Sbjct: 420 KIRQLFGNLVNNAIKYSPDGGPIEIRVTEHN--NRVTVALTDYGIGIPSSAMSELFQKFY 477 Query: 862 RVDNSASKRIGGTGLGLAICKEIIEKHKGTIGIDSVEGEGSTVWFSLPV 910 RVDNS +++IGGTGLGL+IC+EI H G I ++S+EG+GST LP+ Sbjct: 478 RVDNSDTRQIGGTGLGLSICREIARAHDGEIHVESIEGQGSTFTVDLPL 526 >ref|ZP_00182898.1| hypothetical protein Exigu173601 [Exiguobacterium sp. 255-15] Length = 843 Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 154/414 (37%), Positives = 239/414 (57%), Gaps = 15/414 (3%) Query: 508 YDFYTSVVGGNDEILAVFCGS----RIGHAFTEEEISEIQGLASRVALAIERIMMYEEIE 563 Y Y +VV D S R F EE+ EI + ++AL++ R+ +++EIE Sbjct: 416 YSMYETVVPVMDPSTNTMIASIYLVRYRDQFNEEQTEEIWSFSRQLALSLLRMRVFDEIE 475 Query: 564 HGRKLNQDIVNNVNEGIQFVNTEGVMQHINKALSQLFHY----EWAEGSLIPAEAWLDAF 619 R+ +++++ E + ++ + + NK L LFH+ ++ EG L+ + ++ Sbjct: 476 REREKTSKLLHSIREAVIYIEDDKIF--ANKPLLALFHHPSHDQFNEG-LMTLDVKIEEL 532 Query: 620 TGKSNESAELRSFYENAIAESALDSSTMKYSLGKEEIQHVDVYAIPVLRREDRIGTLFVH 679 + ++ Y N + + + + SL KEE + V VYA + GT+ V Sbjct: 533 AVQVDQHEAFLE-YMNRVCRHDIPTEGLSLSLNKEE-RFVQVYAEGIQYGGRFRGTMLVL 590 Query: 680 RDITREYELDVMKSELVSTVSHELRTPLSSVLGFTELLLSKTMKPEKQLKYLETIHKEAK 739 RD+T E +D MKSE VSTVSHELRTPL+S+ G+TEL+L+K + ++Q +YL TIH E + Sbjct: 591 RDVTIETGIDRMKSEFVSTVSHELRTPLASIFGYTELMLAKDLPVDRQQRYLTTIHSETQ 650 Query: 740 RLTELINDFLDLQRMESGTQQYNVEPAHLSEIVLGVIDQYKLSSTHHILFEDEAVHD--E 797 RLT L+NDFLD+QRMES QQY L ++ V + + S++HH L + Sbjct: 651 RLTSLVNDFLDVQRMESSQQQYQFVKLDLRNLIQEVAEFHAGSTSHHQLTLETGDRPLRW 710 Query: 798 VAVDRDKIVQVLTNLLSNAIKFSPGSHEVKVMLHNEPGRILVRIQDQGLGIPKNQIGQLF 857 + D K+ Q+ NL++NAIK+SP E+++ L R+ ++I D+G+GIP++ + +LF Sbjct: 711 IEADEPKMRQLFGNLINNAIKYSPDGGEIELKLEELEDRLRIQIIDEGIGIPQHALPELF 770 Query: 858 QKFRRVDNSASKRIGGTGLGLAICKEIIEKHKGTIGIDSVEGEGSTVWFSLPVQ 911 KF RVDNS S++IGGTGLGLAIC+EI+ H G I ++S EG GS LP + Sbjct: 771 SKFYRVDNSDSRKIGGTGLGLAICQEIVRAHDGLIHVESTEGSGSIFTIELPFE 824 >ref|ZP_00183296.1| hypothetical protein Exigu128901 [Exiguobacterium sp. 255-15] Length = 811 Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 139/400 (34%), Positives = 232/400 (58%), Gaps = 6/400 (1%) Query: 520 EILAVFCGSRIGHAFTEEEISEIQGLASRVALAIERIMMYEEIEHGRKLNQDIVNNVNEG 579 +++A R + +++++++ + ++ L++ R Y+E++ ++ + +++++ E Sbjct: 411 QLMAAVYMVRYQSPYQSQQLADMREFSQQMTLSLLRTRSYDEMKQEKQKTEQVLDSIREA 470 Query: 580 IQFVNTEGVMQHINKALSQL---FHYEWAEGSLIPAEAWLDAFTGKSNESAELRSFYENA 636 I ++ ++N+ L +L E+ + + +++ + E + Y + Sbjct: 471 IIYLEDGNDELYVNRPLFELIPELQSEFTRDRTLSSASYVIEVMRNIVDDVERFNDYLDL 530 Query: 637 IAESALDSSTMKYSLGKEEIQHVDVYAIPVLRREDRIGTLFVHRDITREYELDVMKSELV 696 I + +++ + + H++VYA + G + V RDITRE E D +K+ELV Sbjct: 531 IRSGEVSPDKVQFDV-RGNSAHLEVYAERIDIEGGWKGVILVIRDITRETEADRLKTELV 589 Query: 697 STVSHELRTPLSSVLGFTELLLSKTMKPEKQLKYLETIHKEAKRLTELINDFLDLQRMES 756 STVSHELRTPLSS+ GFTEL+L++ + KQ KYL TIH E +RL+ L+ DFLD+QRM+S Sbjct: 590 STVSHELRTPLSSIYGFTELMLNREIDAIKQQKYLSTIHNETERLSNLVTDFLDVQRMQS 649 Query: 757 GTQQYNVEPAHLSEIVLGVIDQYKLSS-THHILFEDEAVHDEVAV-DRDKIVQVLTNLLS 814 G Q+Y + L IV VI YK S+ H I +V + D +I Q+L NL++ Sbjct: 650 GGQRYQMAHLDLYSIVDQVIGVYKASNGLHDIQLHLLSVERPAIIGDETRIKQLLNNLVN 709 Query: 815 NAIKFSPGSHEVKVMLHNEPGRILVRIQDQGLGIPKNQIGQLFQKFRRVDNSASKRIGGT 874 NAIK+SP +V + + + ++I D G+GIP+ LF KF RVDNS ++RIGGT Sbjct: 710 NAIKYSPDGGQVDITVSTDQENATIQITDHGIGIPQYAFAHLFDKFYRVDNSDTRRIGGT 769 Query: 875 GLGLAICKEIIEKHKGTIGIDSVEGEGSTVWFSLPVQVAE 914 GLGL+ICKEI+++H G I ++S G+GST +LP+ E Sbjct: 770 GLGLSICKEIVKEHDGVIHVESTVGKGSTFTVALPLHALE 809 >ref|ZP_00183750.1| hypothetical protein Exigu085701 [Exiguobacterium sp. 255-15] Length = 267 Score = 236 bits (603), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 123/247 (49%), Positives = 171/247 (69%), Gaps = 6/247 (2%) Query: 672 RIGTLFVHRDITREYELDVMKSELVSTVSHELRTPLSSVLGFTELLLSKTMKPEKQLKYL 731 R GT+ V RD+T+E E+D +KSELVSTVSHELRTPLSS+ GFTEL+L++ M KQ KYL Sbjct: 10 RKGTMLVLRDVTKETEMDRLKSELVSTVSHELRTPLSSIYGFTELMLNRKMDLSKQDKYL 69 Query: 732 ETIHKEAKRLTELINDFLDLQRMESGTQQYNVEPAHLSEIVLGVIDQYKLSSTHH-ILFE 790 +TIH E +RL+ L+NDFLD+QRME+ Q Y +L ++ Y S+T+H I F Sbjct: 70 KTIHSETERLSNLVNDFLDVQRMEARIQSYQKGLLNLQPLLEETTQFYAASTTNHTITF- 128 Query: 791 DEAVHDE---VAVDRDKIVQVLTNLLSNAIKFSPGSHEVKVMLHNEPGRILVRIQDQGLG 847 ++ D + D +K+ Q++ NLL+NA+K+SP ++V+L + + ++D+G+G Sbjct: 129 -RSLTDACPLIEADEEKMKQLMNNLLNNAVKYSPFGGNIEVVLEADHHHVQFAVRDEGIG 187 Query: 848 IPKNQIGQLFQKFRRVDNSASKRIGGTGLGLAICKEIIEKHKGTIGIDSVEGEGSTVWFS 907 IPK+ + +LF KF RVDNS S++IGGTGLGLAICKEI+E H G I ++SVE +GST Sbjct: 188 IPKSALAKLFDKFYRVDNSDSRKIGGTGLGLAICKEIVEGHDGEITVESVEKQGSTFTVK 247 Query: 908 LPVQVAE 914 LP V E Sbjct: 248 LPQSVQE 254 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.133 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,400,279,027 Number of extensions: 55724681 Number of successful extensions: 191422 Number of sequences better than 1.0e-05: 5486 Number of HSP's gapped: 182731 Number of HSP's successfully gapped: 5567 Length of query: 1064 Length of database: 757,237,578 Length adjustment: 136 Effective length of query: 928 Effective length of database: 387,984,114 Effective search space: 360049257792 Effective search space used: 360049257792 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 131 (55.1 bits)