BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0164.0006.p (1065 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_653904.1| ACR_tran, AcrB/AcrD/AcrF family [Bacillus anthr... 954 0.0 ref|NP_835096.1| Acriflavin resistance plasma membrane protein [... 953 0.0 ref|NP_981860.1| transporter, AcrB/AcrD/AcrF family [Bacillus ce... 948 0.0 ref|NP_388553.1| similar to acriflavin resistance protein [Bacil... 930 0.0 ref|ZP_00182418.1| hypothetical protein Exigu228501 [Exiguobacte... 872 0.0 >ref|NP_653904.1| ACR_tran, AcrB/AcrD/AcrF family [Bacillus anthracis A2012] ref|NP_847832.1| transporter, AcrB/AcrD/AcrF family [Bacillus anthracis str. Ames] gb|AAP29318.1| transporter, AcrB/AcrD/AcrF family [Bacillus anthracis str. Ames] Length = 1038 Score = 954 bits (2466), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/1037 (49%), Positives = 693/1037 (66%), Gaps = 28/1037 (2%) Query: 1 MKSLINFSLRNKFAIWLLTIIIVFAGLYSGLTMKQETLPNISIPYLSITTIYPGAAPEGV 60 M +INFSL+NKFA+WLLTII+ AG+YSGL MK ET+P+I+ P +++TT+YPGA PE V Sbjct: 1 MNKIINFSLKNKFAVWLLTIIVTIAGIYSGLNMKLETIPDITTPVVTVTTVYPGATPEEV 60 Query: 61 VNDVSKPLEQKLRNVDGVKTLTSNSLENASSITIEFDYGTNLDNATAAVREALNEVALPD 120 + VSKP+E++L+N+ GV ++S+S +NASSI +E+D+ N++ A +++AL V LP+ Sbjct: 61 ADKVSKPMEEQLQNLSGVNVVSSSSFQNASSIQVEYDFDKNMEKAETEIKDALANVKLPE 120 Query: 121 NVQKPQISRFXXXXXXXXXXXXXXXXXXXXXXXTRIAENDIRPALEDIEGVASVQIAGQY 180 V+ P++SR T E ++ P L+ ++GVASVQI+GQ Sbjct: 121 GVKDPKVSRVNFNAFPVISLSVASKNESLATL-TENVEKNVVPGLKGLDGVASVQISGQQ 179 Query: 181 VKEVTLKFNQDKLKQYGLTEDTIKGIVQGSSLRVPLGLFTMEESQKAXXXXXXXXXXXXL 240 V EV L F +DK+K+ GL+EDT+K +++GS + +PLGL+T ++++K+ L Sbjct: 180 VDEVQLVFKKDKMKELGLSEDTVKNVIKGSDVSLPLGLYTFKDTEKSVVVDGNITTMKAL 239 Query: 241 KNLSIPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTGLP 300 K L IP VP M G+P Sbjct: 240 KELKIPAVPSSASSQGSQTAGAGAQMPQMNPAA----------------------MNGIP 277 Query: 301 TVKLGELANIEVTGKSESISRTNGKESIGIQIVKANDANTVDVVNGVKDKTDELKKQYKS 360 TV L E+A+I+ GK+ESISRTNGKE+IGIQIVKA DANTVDVVN VKDK EL+K+YK Sbjct: 278 TVTLSEIADIKEVGKAESISRTNGKEAIGIQIVKAADANTVDVVNAVKDKVKELEKKYKD 337 Query: 361 MDLTVLLDQGKPIEDSVNTMLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV 420 +++ DQG PIE SV TMLSK AV Sbjct: 338 LEIISTFDQGAPIEKSVETMLSKAIFGAIFAIVIIMLFLRNIRTTLISVVSIPLSLLIAV 397 Query: 421 LCLRQMDITLNMMTLGAMTVAIGRVVDDSIVVIENIYRRLSLSGEKLRGRELISAATREM 480 L ++QMDITLN+MTLGAMTVAIGRVVDDSIVVIENIYRR+SLS EKLRG++LI AT+EM Sbjct: 398 LVIKQMDITLNIMTLGAMTVAIGRVVDDSIVVIENIYRRMSLSEEKLRGKDLIREATKEM 457 Query: 481 FVPIMSSTIVTIAVFLPLAFVSGMVGELFLPFALTMVFALLASLIVAITLVPALAHSLFR 540 F+PIMSSTIVTIAVFLPL V GM+GE+FLPFALT+VFALLASL+VA+T+VP LAHSLF+ Sbjct: 458 FIPIMSSTIVTIAVFLPLGLVKGMIGEMFLPFALTIVFALLASLLVAVTIVPMLAHSLFK 517 Query: 541 N-GLKKGKNSHSEKPGRMAAGYQKILDWSLSHKLITFGVAVLLLVGSLFLIKPIGVSFMP 599 +++ + H EKP ++A Y++IL W+L+HK+IT +AVLLLVGSL L+ IGVSF+P Sbjct: 518 KESMREKEVHHEEKPSKLANIYKRILAWALNHKIITSSIAVLLLVGSLALVPIIGVSFLP 577 Query: 600 SQEEKNVMLTFSPKAGQTLEDVKEQGLKAEKYILAQKHLDKMQYXXXXXXXXXXXXXXXX 659 S+EEK ++ T++P+ GQTLEDV++ KAEK+ K + +Q+ Sbjct: 578 SEEEKMIIATYNPEPGQTLEDVEKIATKAEKHFQDNKDVKTIQFSLGGENPMSPGQSNQA 637 Query: 660 LFYVTYDSDTPDFDTVKENLIEGLTKEVPXXXXXXXXXXXXXXXXXXXXXXXIFGDSLDQ 719 +F+V YD+DT +F+ KE +++ L K ++GDS + Sbjct: 638 MFFVQYDNDTKNFEKEKEQVVKDLQKM--SGKGEWKNQDFGASGGSNEIKLYVYGDSSED 695 Query: 720 LKPVADEIAGIVQADTGNFKDGKTSLSEAYDQYTIVADQAKLSSLGLTAGQIAMKLSPAG 779 +KPV +I I++ + + KD +S+++ Y +YT+VADQ KLS +GLTA QI M LS Sbjct: 696 IKPVVKDIQNIMKKNK-DLKDIDSSIAKTYAEYTLVADQEKLSKMGLTAAQIGMGLSNQH 754 Query: 780 TRPVLTEVAMDGKNYNVYIETDKDTYSSIQEMEKATLTSPLGITVPIGEVAKIENGTSPD 839 RPVLT + DGK+ NVY+E +K TY +I ++ +T+PLG V + +V ++ G + + Sbjct: 755 DRPVLTTIKKDGKDVNVYVEAEKQTYETIDDLTNRKITTPLGNEVAVKDVMTVKEGETSN 814 Query: 840 SITREDGKMKVDVTAEIISSDVNSASNSVKEKIDALDLPDGVTVTFGGVTEQINDTFGQL 899 ++ DG++ +V+A++ S DV+ AS +V++++D +DLP GV V+ GGVT+ I ++F QL Sbjct: 815 TVKHRDGRVYAEVSAKLTSDDVSKASAAVQKEVDKMDLPSGVDVSMGGVTKDIEESFKQL 874 Query: 900 GVAMAAAIAIVYFVLVVTFGGGLAPFAILFSLPFTVIGXXXXXXXXGETLNVSALMGALM 959 G+AM AAIAIVYFVLVVTFGG LAPFAILFSLPFT+IG GETL+VSA++GALM Sbjct: 875 GLAMLAAIAIVYFVLVVTFGGALAPFAILFSLPFTIIGALVALLISGETLSVSAMIGALM 934 Query: 960 LIGIVVTNAIVLIDRVIHKEKEGMSTRQALLEAGATRLRPILMTALATIGALLPLVSGLE 1019 LIGIVVTNAIVLIDRVIHKE EG+STR+ALLEAGATRLRPILMTA+ATIGAL+PL G E Sbjct: 935 LIGIVVTNAIVLIDRVIHKENEGLSTREALLEAGATRLRPILMTAIATIGALIPLALGFE 994 Query: 1020 NSAGIISKGLGVTVIGG 1036 S G+ISKGLGVTVIGG Sbjct: 995 GS-GLISKGLGVTVIGG 1010 >ref|NP_835096.1| Acriflavin resistance plasma membrane protein [Bacillus cereus ATCC 14579] gb|AAP12297.1| Acriflavin resistance plasma membrane protein [Bacillus cereus ATCC 14579] Length = 1038 Score = 953 bits (2463), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/1037 (49%), Positives = 694/1037 (66%), Gaps = 28/1037 (2%) Query: 1 MKSLINFSLRNKFAIWLLTIIIVFAGLYSGLTMKQETLPNISIPYLSITTIYPGAAPEGV 60 M +INFSL+NKFA+WLLTII+ AG+YSGL MK ET+P+I+ P +++TT+YPGA PE V Sbjct: 1 MNKIINFSLKNKFAVWLLTIIVTIAGIYSGLNMKLETIPDITTPIVTVTTVYPGATPEEV 60 Query: 61 VNDVSKPLEQKLRNVDGVKTLTSNSLENASSITIEFDYGTNLDNATAAVREALNEVALPD 120 + VSKP+E++L+N+ GV ++S+S +NASSI +E+D+ N++ A ++EAL V LP+ Sbjct: 61 ADKVSKPMEEQLQNLSGVNVVSSSSFQNASSIQVEYDFDKNMEKAETEIKEALTNVKLPE 120 Query: 121 NVQKPQISRFXXXXXXXXXXXXXXXXXXXXXXXTRIAENDIRPALEDIEGVASVQIAGQY 180 V+ P++SR T E ++ P L+ ++GVASVQIAGQ Sbjct: 121 GVKDPKVSRVNFNAFPVISLSVASKNESLATL-TENVEKNVVPGLKGLDGVASVQIAGQQ 179 Query: 181 VKEVTLKFNQDKLKQYGLTEDTIKGIVQGSSLRVPLGLFTMEESQKAXXXXXXXXXXXXL 240 V EV L F +DK+K+ GL+EDT+K +++GS + +PLGL+T ++++K+ L Sbjct: 180 VDEVQLVFKKDKMKELGLSEDTVKNVIKGSDVSLPLGLYTFKDTEKSVVVDGNITTIKAL 239 Query: 241 KNLSIPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTGLP 300 K L IP +P M G+P Sbjct: 240 KELKIPAIPSSPNGQGSQNAGAGAQTPQMNPAA----------------------MNGIP 277 Query: 301 TVKLGELANIEVTGKSESISRTNGKESIGIQIVKANDANTVDVVNGVKDKTDELKKQYKS 360 TV L E+A+I+ GK+ESISRTNGKE+IGIQIVKA+DANTVDVVN VKDK +L+K+YK Sbjct: 278 TVTLDEIADIKEVGKAESISRTNGKEAIGIQIVKASDANTVDVVNAVKDKVKDLEKKYKD 337 Query: 361 MDLTVLLDQGKPIEDSVNTMLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV 420 +++ DQG PIE SV TMLSK AV Sbjct: 338 LEIISTFDQGAPIEKSVETMLSKAIFGAIFAIVIIMLFLRNIRTTLISVVSIPLSLLIAV 397 Query: 421 LCLRQMDITLNMMTLGAMTVAIGRVVDDSIVVIENIYRRLSLSGEKLRGRELISAATREM 480 L ++QMDITLN+MTLGAMTVAIGRVVDDSIVVIENIYRR+SLS EKLRG++LI AT+EM Sbjct: 398 LVIKQMDITLNIMTLGAMTVAIGRVVDDSIVVIENIYRRMSLSEEKLRGKDLIREATKEM 457 Query: 481 FVPIMSSTIVTIAVFLPLAFVSGMVGELFLPFALTMVFALLASLIVAITLVPALAHSLFR 540 F+PIMSSTIVTIAVFLPL V GM+GE+FLPFALT+VFALLASL+VA+T+VP LAHSLF+ Sbjct: 458 FIPIMSSTIVTIAVFLPLGLVKGMIGEMFLPFALTIVFALLASLLVAVTIVPMLAHSLFK 517 Query: 541 N-GLKKGKNSHSEKPGRMAAGYQKILDWSLSHKLITFGVAVLLLVGSLFLIKPIGVSFMP 599 +++ + H EKP ++A Y++IL W+L+HK+IT +AVLLLVGSL L+ IGVSF+P Sbjct: 518 KESMREKEVHHEEKPSKLANRYKRILAWALNHKIITSSIAVLLLVGSLALVPVIGVSFLP 577 Query: 600 SQEEKNVMLTFSPKAGQTLEDVKEQGLKAEKYILAQKHLDKMQYXXXXXXXXXXXXXXXX 659 S+EEK ++ T++P+ GQTLEDV++ KAEK+ K + +Q+ Sbjct: 578 SEEEKMIIATYNPEPGQTLEDVEKIATKAEKHFQDNKDVKTIQFSLGGENPMSPGQSNQA 637 Query: 660 LFYVTYDSDTPDFDTVKENLIEGLTKEVPXXXXXXXXXXXXXXXXXXXXXXXIFGDSLDQ 719 +F+V YD+DT +F+ KE +++ L K ++GDS + Sbjct: 638 MFFVQYDNDTKNFEKEKEQVVKDLQKM--SGKGEWKNQDFGASGGSNEIKLYVYGDSSED 695 Query: 720 LKPVADEIAGIVQADTGNFKDGKTSLSEAYDQYTIVADQAKLSSLGLTAGQIAMKLSPAG 779 +KPV +I I++ + + KD +S+++ Y +YT+VADQ KLS +GLTA QI M LS Sbjct: 696 IKPVVKDIQNIMKKNK-DLKDIDSSIAKTYAEYTLVADQEKLSKMGLTAAQIGMGLSNQH 754 Query: 780 TRPVLTEVAMDGKNYNVYIETDKDTYSSIQEMEKATLTSPLGITVPIGEVAKIENGTSPD 839 RPVLT + DGK+ NVY+E +K Y +I ++ +T+PLG V + +V ++ G + + Sbjct: 755 DRPVLTTIKKDGKDINVYVEAEKQNYETIDDLTNRKITTPLGNEVAVKDVMTVKEGETSN 814 Query: 840 SITREDGKMKVDVTAEIISSDVNSASNSVKEKIDALDLPDGVTVTFGGVTEQINDTFGQL 899 ++T DG++ +V+A++ S DV+ AS +V++++D +DLP GV V+ GGVT+ I ++F QL Sbjct: 815 TVTHRDGRVYAEVSAKLTSDDVSKASAAVQKEVDKMDLPSGVDVSMGGVTKDIEESFKQL 874 Query: 900 GVAMAAAIAIVYFVLVVTFGGGLAPFAILFSLPFTVIGXXXXXXXXGETLNVSALMGALM 959 G+AM AAIAIVYFVLVVTFGG LAPFAILFSLPFT+IG GETL+VSA++GALM Sbjct: 875 GLAMLAAIAIVYFVLVVTFGGALAPFAILFSLPFTIIGALVALLISGETLSVSAMIGALM 934 Query: 960 LIGIVVTNAIVLIDRVIHKEKEGMSTRQALLEAGATRLRPILMTALATIGALLPLVSGLE 1019 LIGIVVTNAIVLIDRVIHKE EG+STR+ALLEAGATRLRPILMTA+ATIGAL+PL G E Sbjct: 935 LIGIVVTNAIVLIDRVIHKENEGLSTREALLEAGATRLRPILMTAIATIGALIPLALGFE 994 Query: 1020 NSAGIISKGLGVTVIGG 1036 S G+ISKGLGVTVIGG Sbjct: 995 GS-GLISKGLGVTVIGG 1010 >ref|NP_981860.1| transporter, AcrB/AcrD/AcrF family [Bacillus cereus ATCC 10987] gb|AAS44468.1| transporter, AcrB/AcrD/AcrF family [Bacillus cereus ATCC 10987] Length = 1039 Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/1037 (49%), Positives = 691/1037 (66%), Gaps = 27/1037 (2%) Query: 1 MKSLINFSLRNKFAIWLLTIIIVFAGLYSGLTMKQETLPNISIPYLSITTIYPGAAPEGV 60 M +INFSL+NKFA+WLLTII+ AG+YSGL MK ET+P+I+ P +++TT+YPGA PE V Sbjct: 1 MNKIINFSLKNKFAVWLLTIIVTIAGIYSGLNMKLETIPDITTPVVTVTTVYPGATPEEV 60 Query: 61 VNDVSKPLEQKLRNVDGVKTLTSNSLENASSITIEFDYGTNLDNATAAVREALNEVALPD 120 + VSKP+E++L+N+ GV ++S+S +NASSI +E+D+ N++ A ++EAL V LP+ Sbjct: 61 ADKVSKPMEEQLQNLSGVNVVSSSSFQNASSIQVEYDFDKNMEKAETEIKEALANVKLPE 120 Query: 121 NVQKPQISRFXXXXXXXXXXXXXXXXXXXXXXXTRIAENDIRPALEDIEGVASVQIAGQY 180 V+ P++SR T E ++ P L+ ++GVASVQI+GQ Sbjct: 121 GVKDPKVSRVNFNAFPVISLSVASKNESLATL-TENVEKNVVPGLKGLDGVASVQISGQQ 179 Query: 181 VKEVTLKFNQDKLKQYGLTEDTIKGIVQGSSLRVPLGLFTMEESQKAXXXXXXXXXXXXL 240 V EV L F +DK+K+ GL+EDT+K +++GS + +PLGL+T ++++K+ L Sbjct: 180 VDEVQLVFKKDKMKELGLSEDTVKNVIKGSDVSLPLGLYTFKDTEKSVVVDGNITTMKAL 239 Query: 241 KNLSIPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTGLP 300 K L IP VP G+ Sbjct: 240 KELKIPAVPSSASGQGSQNAGAGTQVPQMNPAAMN---------------------NGIS 278 Query: 301 TVKLGELANIEVTGKSESISRTNGKESIGIQIVKANDANTVDVVNGVKDKTDELKKQYKS 360 TV L E+A+I+ GK+ESISRTNGKE+IGIQIVKA DANTVDVVN VKDK EL+K+YK Sbjct: 279 TVTLDEIADIKEVGKAESISRTNGKEAIGIQIVKAADANTVDVVNAVKDKVKELEKKYKD 338 Query: 361 MDLTVLLDQGKPIEDSVNTMLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV 420 +++ DQG PIE SV TMLSK AV Sbjct: 339 LEIISTFDQGAPIEKSVETMLSKAIFGAIFAIVIIMLFLRNIRTTLISVVSIPLSLLIAV 398 Query: 421 LCLRQMDITLNMMTLGAMTVAIGRVVDDSIVVIENIYRRLSLSGEKLRGRELISAATREM 480 L ++QMDITLN+MTLGAMTVAIGRVVDDSIVVIENIYRR+SLSGEKLRG++LI AT+EM Sbjct: 399 LVIKQMDITLNIMTLGAMTVAIGRVVDDSIVVIENIYRRMSLSGEKLRGKDLIREATKEM 458 Query: 481 FVPIMSSTIVTIAVFLPLAFVSGMVGELFLPFALTMVFALLASLIVAITLVPALAHSLFR 540 F+PIMSSTIVTIAVFLPL V GM+GE+FLPFALT+VFALLASL+VA+T+VP LAHSLF+ Sbjct: 459 FIPIMSSTIVTIAVFLPLGLVKGMIGEMFLPFALTIVFALLASLLVAVTIVPMLAHSLFK 518 Query: 541 N-GLKKGKNSHSEKPGRMAAGYQKILDWSLSHKLITFGVAVLLLVGSLFLIKPIGVSFMP 599 +++ + H EKP ++A Y+ IL W+L+HK+IT +A+LLLVGSL L+ IGVSF+P Sbjct: 519 KESMREKEVHHEEKPSKLANIYKHILAWALNHKIITSSIAILLLVGSLALVPIIGVSFLP 578 Query: 600 SQEEKNVMLTFSPKAGQTLEDVKEQGLKAEKYILAQKHLDKMQYXXXXXXXXXXXXXXXX 659 S+EEK ++ T++P+ GQTLEDV++ KAEK+ K++ +Q+ Sbjct: 579 SEEEKMIIATYNPEPGQTLEDVEKIATKAEKHFQDNKNVKTIQFSLGGENPMSPGQSNQA 638 Query: 660 LFYVTYDSDTPDFDTVKENLIEGLTKEVPXXXXXXXXXXXXXXXXXXXXXXXIFGDSLDQ 719 +F+V YD+DT +F+ KE +++ L K ++GDS + Sbjct: 639 MFFVQYDNDTKNFEKEKEQVVKDLQKM--SGKGEWKNQDFGASGGSNEIKLYVYGDSSED 696 Query: 720 LKPVADEIAGIVQADTGNFKDGKTSLSEAYDQYTIVADQAKLSSLGLTAGQIAMKLSPAG 779 +KPV +I I++ + + KD +S+++ Y +YT+VADQ KLS +GLTA QI M LS Sbjct: 697 IKPVVKDIQNIMKKNK-DLKDIDSSIAKTYAEYTLVADQEKLSKMGLTAAQIGMGLSNQH 755 Query: 780 TRPVLTEVAMDGKNYNVYIETDKDTYSSIQEMEKATLTSPLGITVPIGEVAKIENGTSPD 839 RPVLT + DGK+ NVY+E +K Y +I ++ +T+PLG V + +V ++ G + + Sbjct: 756 DRPVLTTIKKDGKDINVYVEAEKQNYETIDDLTNRKITTPLGNEVAVKDVMTVKEGETSN 815 Query: 840 SITREDGKMKVDVTAEIISSDVNSASNSVKEKIDALDLPDGVTVTFGGVTEQINDTFGQL 899 ++ DG++ +V+A++ S DV+ AS +V++++D +DLP GV V+ GGVT+ I ++F QL Sbjct: 816 TVKHRDGRVYAEVSAKLTSDDVSKASAAVQKEVDKMDLPSGVDVSMGGVTKDIEESFKQL 875 Query: 900 GVAMAAAIAIVYFVLVVTFGGGLAPFAILFSLPFTVIGXXXXXXXXGETLNVSALMGALM 959 G+AM AAIAIVYFVLVVTFGG LAPFAILFSLPFT+IG GETL+VSA++GALM Sbjct: 876 GLAMLAAIAIVYFVLVVTFGGALAPFAILFSLPFTIIGALVALLISGETLSVSAMIGALM 935 Query: 960 LIGIVVTNAIVLIDRVIHKEKEGMSTRQALLEAGATRLRPILMTALATIGALLPLVSGLE 1019 LIGIVVTNAIVLIDRVIHKE EG+STR+ALLEAGATRLRPILMTA+ATIGAL+PL G E Sbjct: 936 LIGIVVTNAIVLIDRVIHKENEGLSTREALLEAGATRLRPILMTAIATIGALIPLALGFE 995 Query: 1020 NSAGIISKGLGVTVIGG 1036 S G+ISKGLGVTVIGG Sbjct: 996 GS-GLISKGLGVTVIGG 1011 >ref|NP_388553.1| similar to acriflavin resistance protein [Bacillus subtilis] pir||E69795 acriflavin resistance protein homolog yerP - Bacillus subtilis emb|CAB12491.1| yerP [Bacillus subtilis subsp. subtilis str. 168] Length = 1065 Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust. Identities = 505/1063 (47%), Positives = 676/1063 (63%), Gaps = 18/1063 (1%) Query: 1 MKSLINFSLRNKFAIWLLTIIIVFAGLYSGLTMKQETLPNISIPYLSITTIYPGAAPEGV 60 M +INF L+NKFA+WL+TII+ AGLY+G+ MKQE++P++++PYL+I+T YPGA P V Sbjct: 14 MNHVINFVLKNKFAVWLMTIIVTAAGLYAGMNMKQESIPDVNMPYLTISTTYPGATPSQV 73 Query: 61 VNDVSKPLEQKLRNVDGVKTLTSNSLENASSITIEFDYGTNLDNATAAVREALNEVALPD 120 ++V+KP+EQ ++N+DGV +TS S ENASS+ IE+DY ++D A EAL V LPD Sbjct: 74 ADEVTKPVEQAVQNLDGVSVVTSTSYENASSVMIEYDYEKDMDKAKTEAAEALENVNLPD 133 Query: 121 NVQKPQISRFXXXXXXXXXXXXXXXXXXXXXXXTRIAENDIRPALEDIEGVASVQIAGQY 180 + + P+ISR+ T+ E+ + LE IEGVASVQ++GQ Sbjct: 134 DAKDPEISRYSLNSFPILTLSVSSDKDNLQEL-TKQVEDSLVSKLEGIEGVASVQVSGQQ 192 Query: 181 VKEVTLKFNQDKLKQYGLTEDTIKGIVQGSSLRVPLGLFTMEESQKAXXXXXXXXXXXXL 240 V+EV F +DKLK+YGL EDT+K ++QGS + PLGL+T +K+ L Sbjct: 193 VEEVEFSFKEDKLKEYGLDEDTVKQVIQGSDVTTPLGLYTFGNEEKSVVVSGDIETIKDL 252 Query: 241 KNLSIPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTGLP 300 KN+ IP T +P Sbjct: 253 KNMRIPTA-------------SASSAGSSAASQAGAQSAQAAQSAQAAAQVQQSASTAVP 299 Query: 301 TVKLGELANIEVTGKSESISRTNGKESIGIQIVKANDANTVDVVNGVKDKTDELKKQYKS 360 TVKL ++A I+ K+ES+SRTNGK+SIGI IVKANDANTV+V + VK + + K+ +K Sbjct: 300 TVKLSDIATIKDVKKAESVSRTNGKDSIGINIVKANDANTVEVADDVKAELKKFKEDHKG 359 Query: 361 MDLTVLLDQGKPIEDSVNTMLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV 420 + + LD +PI SV+TMLSK A+ Sbjct: 360 FNYSATLDMAEPITQSVDTMLSKAIFGAIFAIVIILLFLRDIKSTLISVVSIPLSLLIAL 419 Query: 421 LCLRQMDITLNMMTLGAMTVAIGRVVDDSIVVIENIYRRLSLSGEKLRGRELISAATREM 480 L L+Q+DITLN+MTLGAMTVAIGRVVDDSIVVIENIYRR+ L E LRG+ L+ AT+EM Sbjct: 420 LVLQQLDITLNIMTLGAMTVAIGRVVDDSIVVIENIYRRMRLKDEPLRGKALVREATKEM 479 Query: 481 FVPIMSSTIVTIAVFLPLAFVSGMVGELFLPFALTMVFALLASLIVAITLVPALAHSLFR 540 F PIMSSTIVTIAVFLPLA V G +GELF+PFALT+VFAL ASL+++ITLVP LAHSLF+ Sbjct: 480 FKPIMSSTIVTIAVFLPLALVGGQIGELFIPFALTIVFALAASLVISITLVPMLAHSLFK 539 Query: 541 NGLKKGK-NSHSEKPGRMAAGYQKILDWSLSHKLITFGVAVLLLVGSLFLIKPIGVSFMP 599 L + KPGR+A Y+K+L+W+LSHK IT +AVL+L+GSLFL+ IG S++P Sbjct: 540 KSLTGAPIKAKEHKPGRLANIYKKVLNWALSHKWITSIIAVLMLLGSLFLVPLIGASYLP 599 Query: 600 SQEEKNVMLTFSPKAGQTLEDVKEQGLKAEKYILAQKHLDKMQYXXXXXXXXXXXXXXXX 659 S+EEK + LT+SP+ G+T ++ + + KAEK +L +KH+D +QY Sbjct: 600 SEEEKTMQLTYSPEPGETKKEAENEAEKAEKILLDRKHVDTVQYSLGSGSPLAGGDSNGA 659 Query: 660 LFYVTYDSDTPDFDTVKENLIEGLTKEVPXXXXXXXXXXXXXXXXXXXXXXXIFGDSLDQ 719 LFY+ Y+SDTPDFD K+N+++ + K+ ++GDS + Sbjct: 660 LFYIKYESDTPDFDKEKDNVLKEIQKQ--SDRGEWKSQDFSSSGNNNELTYYVYGDSEND 717 Query: 720 LKPVADEIAGIVQADTGNFKDGKTSLSEAYDQYTIVADQAKLSSLGLTAGQIAMKLSPAG 779 +K +I I++ D + K+ + LS YD+YT VADQ KLS LGLTA QI+ L Sbjct: 718 IKDTVKDIEKIMK-DEKDLKNVNSGLSSTYDEYTFVADQEKLSKLGLTASQISQALMSQT 776 Query: 780 TRPVLTEVAMDGKNYNVYIETDKDTYSSIQEMEKATLTSPLGITVPIGEVAKIENGTSPD 839 ++ LT V DGK +V I+T+KD Y S++++E +TS G V IG+VAK++ G++ D Sbjct: 777 SQEPLTTVKKDGKELDVNIKTEKDEYKSVKDLENKKITSATGQEVKIGDVAKVKEGSTSD 836 Query: 840 SITREDGKMKVDVTAEIISSDVNSASNSVKEKIDALDLPDGVTVTFGGVTEQINDTFGQL 899 ++++ DGK+ DVT E+ S +V + S ++++KID LD PD V++ GGV+ I D+F +L Sbjct: 837 TVSKRDGKVYADVTGEVTSDNVTAVSAAIQKKIDKLDHPDNVSIDTGGVSADIADSFTKL 896 Query: 900 GVAMAAAIAIVYFVLVVTFGGGLAPFAILFSLPFTVIGXXXXXXXXGETLNVSALMGALM 959 G+AM AAIAIVY VLV+TFGG LAPFAILFSLPFTVIG GET++++A++G LM Sbjct: 897 GLAMLAAIAIVYLVLVITFGGALAPFAILFSLPFTVIGALVGLYVSGETISLNAMIGMLM 956 Query: 960 LIGIVVTNAIVLIDRVIHKEKEGMSTRQALLEAGATRLRPILMTALATIGALLPLVSGLE 1019 LIGIVVTNAIVLIDRVIHKE EG+STR+ALLEAG+TRLRPILMTA+ATIGAL+PL G E Sbjct: 957 LIGIVVTNAIVLIDRVIHKEAEGLSTREALLEAGSTRLRPILMTAIATIGALIPLALGFE 1016 Query: 1020 NSAGIISKGLGVTVIGGXXXXXXXXXXXXXXXYEFLMKFRSKK 1062 + +ISKGLGVTVIGG YE L KFR KK Sbjct: 1017 GGSQVISKGLGVTVIGGLISSTLLTLLIVPIVYEVLAKFRKKK 1059 >ref|ZP_00182418.1| hypothetical protein Exigu228501 [Exiguobacterium sp. 255-15] Length = 1055 Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/1063 (44%), Positives = 648/1063 (60%), Gaps = 12/1063 (1%) Query: 1 MKSLINFSLRNKFAIWLLTIIIVFAGLYSGLTMKQETLPNISIPYLSITTIYPGAAPEGV 60 MK +I FS+ NKFA+WLLTIII AG+Y+G TMK ETLP+I+ P +S+TTIYPGA PE V Sbjct: 1 MKRIIQFSVNNKFALWLLTIIITVAGIYAGTTMKLETLPDITTPTVSVTTIYPGATPEQV 60 Query: 61 VNDVSKPLEQKLRNVDGVKTLTSNSLENASSITIEFDYGTNLDNATAAVREALNEVALPD 120 +++VS+ LE K+ N+ GV+T+ S+S +NAS++ I++ + T++D A V+EAL V LP+ Sbjct: 61 LDEVSRELESKVENLGGVETVRSSSFQNASNLQIDYSFSTDMDEAEQKVKEALANVELPE 120 Query: 121 NVQKPQISRFXXXXXXXXXXXXXXXXXXXXXXXTRIAENDIRPALEDIEGVASVQIAGQY 180 Q+PQ+SR T++ EN+++P LE IEG +VQIAGQ Sbjct: 121 GAQEPQVSRISFDAFPIIGFAVSDENRSLSDL-TKLVENELQPKLEGIEGAQTVQIAGQE 179 Query: 181 VKEVTLKFNQDKLKQYGLTEDTIKGIVQGSSLRVPLGLFTMEESQKAXXXXXXXXXXXXL 240 ++ + ++F++ KL+QYGLTE+ +K ++Q + R+ LGL+ + + ++A L Sbjct: 180 IRRIEIRFDEKKLQQYGLTEENVKQLIQANDSRLALGLYELGDKEQAVVLDGKATTVNAL 239 Query: 241 KNLSIPVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTGLP 300 KN+ +P P T +P Sbjct: 240 KNIRLPYTPQATPGAGQGQTQTPASGSDATQGQTQAPASSAPAGQTPVAAAP----TQVP 295 Query: 301 TVKLGELANIEVTGKSESISRTNGKESIGIQIVKANDANTVDVVNGVKDKTDELKKQYKS 360 TVKL +LA IE G ESISR+NG+ SIG+Q+ K+ DANTV+VVN VK+ + +K Sbjct: 296 TVKLSQLAKIEDKGIEESISRSNGERSIGVQVTKSQDANTVEVVNAVKETIKDFEKDNDG 355 Query: 361 MDLTVLLDQGKPIEDSVNTMLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAV 420 + +V LDQGKPIE+SV+TM+SK A+ Sbjct: 356 VKASVTLDQGKPIEESVSTMISKALIGALFAVVIILLFLRNFKSTIIAVISIPLSLLMAI 415 Query: 421 LCLRQMDITLNMMTLGAMTVAIGRVVDDSIVVIENIYRRLSLSGEKLRGRELISAATREM 480 L L+Q+DI+LN+MTLGAMTVAIGRVVDDSIVVIENIYRRL+ E L+G+ LI ATRE+ Sbjct: 416 LVLKQLDISLNIMTLGAMTVAIGRVVDDSIVVIENIYRRLTDPTEPLKGKALIIEATREV 475 Query: 481 FVPIMSSTIVTIAVFLPLAFVSGMVGELFLPFALTMVFALLASLIVAITLVPALAHSLFR 540 F+P+ SSTIVTIAVFLPL FV+G VGELFLPFALT+VFAL ASLIVA+T+VP A SLF+ Sbjct: 476 FIPVASSTIVTIAVFLPLGFVTGFVGELFLPFALTVVFALFASLIVAVTVVPMFADSLFK 535 Query: 541 NGLKKGKNSHSEKPGRMAAGYQKILDWSLSHKLITFGVAVLLLVGSLFLIKPIGVSFMPS 600 G K E G++A Y+ +L+WSL+HK + FG+AVLLL+GS L+ IGV+F+ Sbjct: 536 RG--KAPKPEKEDGGKLANWYRGVLNWSLNHKFVVFGLAVLLLIGSFALVPTIGVNFLNQ 593 Query: 601 QEEKNVMLTFSPKAGQTLEDVKEQGLKAEKYILAQKHLDKMQYXXXXXXXXXXXXXXXXL 660 + EK +T++PK GQTL+D + AE Y Q+ +D +Q+ + Sbjct: 594 ESEKTFYVTYNPKPGQTLDDSLKAADLAEGYFEKQRDMDNLQFTVGGENPLNPGNTKQAV 653 Query: 661 FYVTYDSDTPDFDTVKENLIEGLTKEVPXXXXXXXXXXXXXXXXXXXXXXXIFGDSLDQL 720 F YD DT DF VK+ I+ L KE+P ++ +S++ L Sbjct: 654 FIAQYDPDTADFADVKQQAIKQLNKEIPTGEWKEQDFSGGAASSGVSYS--VYANSIEDL 711 Query: 721 KPVADEIAGIVQADTGNFKDGKTSLSEAYDQYTIVADQAKLSSLGLTAGQIAMKLSPA-G 779 + + E ++ ++ + T L E+Y QYT DQ K + G++ Q+A ++ G Sbjct: 712 QKITPEFVKAIEGESKYVRKVTTDLKESYTQYTFEVDQQKAAEFGISTAQLAQGIANVQG 771 Query: 780 TRPVLTEVAMDGKNYNVYIETDKDTYSSIQEMEKATLTSPLGITVPIGEVAKIENGTSPD 839 L+ + +DGK +V + ++ TY SI +++K +T+PLG+ + + ++ GT+PD Sbjct: 772 EEKPLSTIKVDGKELDVIVPNEQTTYDSINDLQKTDVTTPLGVR-KLSDFVSVKKGTTPD 830 Query: 840 SITREDGKMKVDVTAEIISSDVNSASNSVKEKIDALDLPDGVTVTFGGVTEQINDTFGQL 899 S++ DGK+ VTAE+ + AS ++ + + ++LP GV+ GGVTEQI ++F QL Sbjct: 831 SLSERDGKLVATVTAELKTDKATEASQAIDKTVKKINLPTGVSYKAGGVTEQIQESFTQL 890 Query: 900 GVAMAAAIAIVYFVLVVTFGGGLAPFAILFSLPFTVIGXXXXXXXXGETLNVSALMGALM 959 G+AMAAA+AIVY VLVVTFGG L P ILFSLPF +IG GET++VS+L+GALM Sbjct: 891 GLAMAAAVAIVYLVLVVTFGGALTPLVILFSLPFAIIGGLLALLITGETISVSSLIGALM 950 Query: 960 LIGIVVTNAIVLIDRVIHKEKEGMSTRQALLEAGATRLRPILMTALATIGALLPLVSGLE 1019 LIGIVVTNAIVLIDRVIHKEKEG+ TR+ALL+A TRLRPILMTALATIGAL PL GLE Sbjct: 951 LIGIVVTNAIVLIDRVIHKEKEGLDTREALLDAAGTRLRPILMTALATIGALSPLALGLE 1010 Query: 1020 NSAGIISKGLGVTVIGGXXXXXXXXXXXXXXXYEFLMKFRSKK 1062 A +ISKGLGVTVIGG YEF +FR K Sbjct: 1011 GGA-LISKGLGVTVIGGLTSSTLLTLLIVPIVYEFFARFRKNK 1052 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.134 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,181,455,392 Number of extensions: 43465002 Number of successful extensions: 179019 Number of sequences better than 1.0e-05: 2383 Number of HSP's gapped: 175399 Number of HSP's successfully gapped: 4215 Length of query: 1065 Length of database: 757,237,578 Length adjustment: 136 Effective length of query: 929 Effective length of database: 387,984,114 Effective search space: 360437241906 Effective search space used: 360437241906 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 131 (55.1 bits)