BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0162.0007.p (139 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00097313.1| COG0456: Acetyltransferases [Desulfitobacteri... 130 1e-29 ref|ZP_00126263.1| COG0456: Acetyltransferases [Pseudomonas syri... 128 5e-29 ref|NP_232862.1| acetyltransferase, putative [Vibrio cholerae O1... 124 7e-28 ref|NP_798229.1| putative acetyltransferase [Vibrio parahaemolyt... 122 3e-27 ref|NP_762800.1| Acetyltransferase [Vibrio vulnificus CMCP6] >gi... 122 4e-27 >ref|ZP_00097313.1| COG0456: Acetyltransferases [Desulfitobacterium hafniense] Length = 258 Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 84/135 (62%), Gaps = 1/135 (0%) Query: 4 RPMTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVAVNGDKTLAGTAMCG 63 R + +DY+A LW+NTEG+ LS DSRE I R+L RNP +S VA D + G +CG Sbjct: 125 RALVIEDYDAVIELWQNTEGIGLSETDSRENIRRFLARNPYLSSVA-EKDGEILGAVLCG 183 Query: 64 HDGRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSFWTRI 123 HD RRGY++H+AV D R QG+G+ LV L +L EGI+KCH+ V N G +FW + Sbjct: 184 HDSRRGYLHHLAVRSDRRLQGIGKRLVDISLENLKAEGIDKCHIFVFRENEKGVAFWAQN 243 Query: 124 GWEERDGIVLFSSNT 138 W+ R + + S T Sbjct: 244 EWKARLDLTIMSKRT 258 >ref|ZP_00126263.1| COG0456: Acetyltransferases [Pseudomonas syringae pv. syringae B728a] Length = 143 Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 68/136 (50%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Query: 1 MNYRPMTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVAVNGDKTLAGTA 60 + R MT DDY+A L +T G++L ADSRE RYLERNPGMS VA D TL G Sbjct: 2 ITIRSMTLDDYDAVIELMRSTPGISLRDADSREATARYLERNPGMSFVA-EADGTLCGCV 60 Query: 61 MCGHDGRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSFW 120 MCGHDGRRGY+ H+ V + R +G+ ELV RCL L GI KCHL V++SN +W Sbjct: 61 MCGHDGRRGYLQHLIVLPEYRRRGIAHELVERCLECLEALGIYKCHLDVMKSNEAAGRYW 120 Query: 121 TRIGWEERDGIVLFSS 136 GW R+ I +S Sbjct: 121 QGQGWTLREDIDRYSK 136 >ref|NP_232862.1| acetyltransferase, putative [Vibrio cholerae O1 biovar eltor str. N16961] pir||F82455 probable acetyltransferase VCA0470 [imported] - Vibrio cholerae (strain N16961 serogroup O1) gb|AAF05321.1| Vco25 [Vibrio cholerae] gb|AAF96374.1| acetyltransferase, putative [Vibrio cholerae O1 biovar eltor str. N16961] Length = 144 Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 1/138 (0%) Query: 1 MNYRPMTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVAVNGDKTLAGTA 60 + +R M DY LW TE ++L ADSR I YL+RN G+S VAV+ D + G Sbjct: 2 VTFREMDISDYNEVIALWATTENVSLRDADSRPNIEAYLKRNQGLSFVAVS-DSLVIGAV 60 Query: 61 MCGHDGRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSFW 120 + G DGRRGY+ H+AVS D RGQG+G+ L+ + +L + GI K HL V+ N + + F+ Sbjct: 61 LVGTDGRRGYVQHLAVSSDFRGQGIGKSLIQKATDALSRIGISKTHLFVLIENVVAQDFY 120 Query: 121 TRIGWEERDGIVLFSSNT 138 T++ W RD I +FS N+ Sbjct: 121 TKLDWYPRDEIRMFSYNS 138 >ref|NP_798229.1| putative acetyltransferase [Vibrio parahaemolyticus RIMD 2210633] dbj|BAC60113.1| putative acetyltransferase [Vibrio parahaemolyticus] Length = 142 Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 83/135 (61%), Gaps = 1/135 (0%) Query: 4 RPMTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVAVNGDKTLAGTAMCG 63 R M DY LW TE M L ADS+E I +YL+RNP +S VA++GD + G + G Sbjct: 3 REMDISDYSQVIDLWSTTEAMLLRDADSKENIGKYLKRNPNLSFVALDGDNII-GAILVG 61 Query: 64 HDGRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSFWTRI 123 DGRRGY+ H+AV RG+GVG +L+S + +L + GI K HL V N +SF+ ++ Sbjct: 62 TDGRRGYVQHLAVDSTFRGKGVGAKLISSAVEALSKVGIAKTHLFVANENINAQSFYEKL 121 Query: 124 GWEERDGIVLFSSNT 138 GW RD + +FS N+ Sbjct: 122 GWFPRDEVRMFSFNS 136 >ref|NP_762800.1| Acetyltransferase [Vibrio vulnificus CMCP6] gb|AAO07790.1| Acetyltransferase [Vibrio vulnificus CMCP6] Length = 138 Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 84/133 (63%), Gaps = 1/133 (0%) Query: 6 MTADDYEAAYRLWENTEGMNLSGADSREEILRYLERNPGMSQVAVNGDKTLAGTAMCGHD 65 M DYE LW TE + + ADS+ I YL+RNPG+S V ++ +KT+A + G D Sbjct: 1 MEISDYENVMALWGETEHLAIKDADSKPSIAAYLKRNPGLSFVVLDNEKTIAAV-LVGTD 59 Query: 66 GRRGYMYHVAVSEDGRGQGVGRELVSRCLASLLQEGIEKCHLMVIESNALGRSFWTRIGW 125 GRRGY+ H++V D RGQG+G++LV+R +L GI K HL V+ N ++F+ ++GW Sbjct: 60 GRRGYLQHLSVDSDYRGQGIGQQLVTRATDALAALGIAKTHLFVLSDNHAAQNFYQKMGW 119 Query: 126 EERDGIVLFSSNT 138 RD + +FS N+ Sbjct: 120 FARDEVRMFSFNS 132 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.135 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 214,036,554 Number of extensions: 8028075 Number of successful extensions: 18957 Number of sequences better than 1.0e-05: 40 Number of HSP's gapped: 18963 Number of HSP's successfully gapped: 40 Length of query: 139 Length of database: 757,237,578 Length adjustment: 100 Effective length of query: 39 Effective length of database: 485,727,678 Effective search space: 18943379442 Effective search space used: 18943379442 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 120 (50.8 bits)