BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0162.0006.p (197 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_979012.1| conserved hypothetical protein [Bacillus cereus... 129 3e-29 ref|NP_691742.1| hypothetical protein OB0821 [Oceanobacillus ihe... 119 4e-26 ref|NP_845030.1| conserved hypothetical protein [Bacillus anthra... 116 3e-25 ref|NP_832434.1| hypothetical protein [Bacillus cereus ATCC 1457... 116 4e-25 ref|NP_656545.1| hypothetical protein predicted by GeneMark [Bac... 115 4e-25 >ref|NP_979012.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gb|AAS41620.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 176 Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 1/163 (0%) Query: 18 AGNAVLKEVWQLLRELRIMELLAEYHPRLAGTVPLGIQVEGSDLDIICEVHEPRNFIETA 77 +GN ++V+ +L +L IME LA Y+P L GT+P+ I SDLDI+ EVH F + Sbjct: 10 SGNDKQQKVYDVLNKLNIMEDLALYNPVLCGTIPIRIDTLQSDLDIVMEVHNFDVFEQEM 69 Query: 78 RCHFGQLEGFYAVTRTVEGVVRTKINFSAGGWPIELFGQPLATEKQNAWLHMQVEGRILR 137 R +G EGF + ++ K+NF G+ ELF QP QNA+ HM VE +L Sbjct: 70 RSLYGSYEGFKIKKKKIKNTESIKVNFKFEGFDFELFAQPKPVRNQNAYRHMIVEHMLL- 128 Query: 138 LLGPGFTENIRALKSGGMKTEPAFAKLLKLEGDPYEEMLVLGR 180 + P E I LK G+KTEPAFA++L + GDPY+E+++LG+ Sbjct: 129 MQHPHIREEIIRLKEKGLKTEPAFAQVLNIVGDPYDELILLGQ 171 >ref|NP_691742.1| hypothetical protein OB0821 [Oceanobacillus iheyensis HTE831] dbj|BAC12777.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 175 Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 1/163 (0%) Query: 18 AGNAVLKEVWQLLRELRIMELLAEYHPRLAGTVPLGIQVEGSDLDIICEVHEPRNFIETA 77 GN K+V++ ++ L ++E YHP + GT P+ I ++ SD+DII V + + F Sbjct: 9 CGNREQKKVYEAVQSLGVIENFKIYHPVICGTYPIDIYIDESDIDIIMFVEDFQLFSHKL 68 Query: 78 RCHFGQLEGFYAVTRTVEGVVRTKINFSAGGWPIELFGQPLATEKQNAWLHMQVEGRILR 137 + H+ L F + + K F G+ ELFGQ + +Q A+LHM++E IL Sbjct: 69 QSHYSDLREFNIKEKIIRNNHIVKAQFDFKGFTFELFGQNVPVVEQYAYLHMKIENHILD 128 Query: 138 LLGPGFTENIRALKSGGMKTEPAFAKLLKLEGDPYEEMLVLGR 180 L P NIR LK G+KTEPAF +LL + GDPYE ++ GR Sbjct: 129 -LHPSMKNNIRLLKEAGIKTEPAFCRLLGIAGDPYEGLINYGR 170 >ref|NP_845030.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gb|AAP26516.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 176 Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 18 AGNAVLKEVWQLLRELRIMELLAEYHPRLAGTVPLGIQVEGSDLDIICEVHEPRNFIETA 77 +GN ++V+ +L +L IME LA Y P L GT+P+ + SDLDI+ EVH F + Sbjct: 10 SGNDKQQKVYDVLNKLNIMEDLALYSPVLCGTIPIRMDTLQSDLDIVMEVHNFDVFEQEM 69 Query: 78 RCHFGQLEGFYAVTRTVEGVVRTKINFSAGGWPIELFGQPLATEKQNAWLHMQVEGRILR 137 R +G EGF + ++ K+NF G+ ELF QP QNA+ HM VE +L Sbjct: 70 RSLYGSYEGFRIKKKKIKNTESIKVNFEFEGFEFELFAQPKPVRNQNAYRHMIVEHMLL- 128 Query: 138 LLGPGFTENIRALKSGGMKTEPAFAKLLKLEGDPYEEMLVLGR 180 + P E I LK G+KTEPAFA++L + GDPYE +++LG+ Sbjct: 129 MQHPHIREEILRLKENGLKTEPAFAQVLNVNGDPYEALILLGQ 171 >ref|NP_832434.1| hypothetical protein [Bacillus cereus ATCC 14579] gb|AAP09635.1| hypothetical protein [Bacillus cereus ATCC 14579] Length = 184 Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 1/163 (0%) Query: 18 AGNAVLKEVWQLLRELRIMELLAEYHPRLAGTVPLGIQVEGSDLDIICEVHEPRNFIETA 77 +GN ++++ +L L IME LA Y+P L GT+P+ I SDLDI+ EV+ F + Sbjct: 18 SGNEKQQKIYDVLNSLNIMEDLALYNPVLCGTIPIRIDTPQSDLDIVMEVYNFDVFEQEM 77 Query: 78 RCHFGQLEGFYAVTRTVEGVVRTKINFSAGGWPIELFGQPLATEKQNAWLHMQVEGRILR 137 R +G GF + ++G K+NF G+ ELF QP QNA+ HM VE +L Sbjct: 78 RSLYGSYGGFNIKKKKIKGTESIKVNFEFEGFEFELFAQPKPVRNQNAYRHMIVE-HMLL 136 Query: 138 LLGPGFTENIRALKSGGMKTEPAFAKLLKLEGDPYEEMLVLGR 180 + P E + LK G+KTEPAFA++L ++GDPYEE+++LG+ Sbjct: 137 MQHPHIREEVIRLKEQGLKTEPAFAQVLNIDGDPYEELILLGQ 179 >ref|NP_656545.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] Length = 176 Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 68/163 (41%), Positives = 96/163 (58%), Gaps = 1/163 (0%) Query: 18 AGNAVLKEVWQLLRELRIMELLAEYHPRLAGTVPLGIQVEGSDLDIICEVHEPRNFIETA 77 +GN ++V+ +L +L IME LA Y P L GT+P+ + SDLDI+ EVH F + Sbjct: 10 SGNDKQQKVYDVLNKLNIMEDLALYSPVLCGTIPIRMDTLQSDLDIVMEVHNFDVFEQEM 69 Query: 78 RCHFGQLEGFYAVTRTVEGVVRTKINFSAGGWPIELFGQPLATEKQNAWLHMQVEGRILR 137 R +G EGF + ++ K+NF G+ ELF QP QNA+ HM VE +L Sbjct: 70 RSLYGSYEGFRIKKKKIKNTESIKVNFEFEGFEFELFAQPKPVRNQNAYRHMIVEHMLL- 128 Query: 138 LLGPGFTENIRALKSGGMKTEPAFAKLLKLEGDPYEEMLVLGR 180 + P E I LK G+KTEPAFA++L + GDPYE +++LG+ Sbjct: 129 MQHPHIREEILRLKENGLKTEPAFAQVLNVNGDPYEALILLGQ 171 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.140 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 312,867,567 Number of extensions: 12668635 Number of successful extensions: 24985 Number of sequences better than 1.0e-05: 8 Number of HSP's gapped: 24977 Number of HSP's successfully gapped: 8 Length of query: 197 Length of database: 757,237,578 Length adjustment: 119 Effective length of query: 78 Effective length of database: 434,140,797 Effective search space: 33862982166 Effective search space used: 33862982166 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 122 (51.6 bits)