BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0025.p (888 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_831244.1| Lysyltransferase [Bacillus cereus ATCC 14579] >... 469 e-130 ref|NP_655369.1| hypothetical protein predicted by GeneMark [Bac... 469 e-130 ref|NP_977911.1| virulence factor MprF [Bacillus cereus ATCC 109... 468 e-130 ref|ZP_00182694.1| hypothetical protein Exigu198101 [Exiguobacte... 390 e-107 ref|NP_562163.1| conserved hypothetical protein [Clostridium per... 375 e-102 >ref|NP_831244.1| Lysyltransferase [Bacillus cereus ATCC 14579] gb|AAP08445.1| Lysyltransferase [Bacillus cereus ATCC 14579] Length = 859 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 298/868 (34%), Positives = 447/868 (51%), Gaps = 30/868 (3%) Query: 27 QIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATVSLYDFV 86 +II P V+ ++++ +KE I + + T+ ++ V L AV+T+ YD+V Sbjct: 13 KIIFPFVVLTIVFFQAKKELAGISFLEAIDTIKNIPTGGVFLAITLGAFAVSTMFFYDYV 72 Query: 87 LRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTITASIAFL 146 + R+ + + + FR SWIANT N IGF G+ GA +RT LYR + SIA++ Sbjct: 73 MLRYLKADIPVQKIFRISWIANTLNGFIGFGGLVGAGVRTMLYRPYIKENGKLIKSIAWM 132 Query: 147 STITITGLSVLSWAGILGILPMQPVLQSHPWTIYAVWAAALYLPGYLILQRTSFYAKWLN 206 +T I GL++LS+ G++GIL + +L PW + AL++P Y+ ++K N Sbjct: 133 TTAFINGLAILSFLGLIGILDTRFILHEKPWLWPVLIFFALFVPIYI------GFSKLKN 186 Query: 207 RN----LPXXXXMDAATIAASVGASLLEWAFAGISFWLIGSCFLPALSLAQALGIYTLSA 262 R T+ S+ SL+EW AGI ++I F + + LG+Y ++A Sbjct: 187 RKATQTEEQEEEEKNPTVLYSL-VSLVEWVSAGIVMYVILLLFGIEIEFQKFLGVYVIAA 245 Query: 263 ITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVLAAFDF 322 + G++S+ PGG+G FDL L GL Q G +G P+ +GL+ AAF+ Sbjct: 246 LAGVVSLVPGGLGSFDLVFLTGLGQYGIDTGVLLPAMLLYRLVYYILPFCLGLIFAAFEM 305 Query: 323 ARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLLLSAAT 382 G + D L IW +G++G+W+ L +G++++LS Sbjct: 306 T-GVAIKKFEDKPFIAPALETTGVIWTLQRDF--LGKLGSWASAALTVFAGLMVILSTIL 362 Query: 383 PGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRAYRLTLFFLCA 442 P NR L L++ S + KR+Y +T+ L Sbjct: 363 P---TSINRAHALHILAPKHLIQFSFSLSLTFGILLLILSRGIYYGTKRSYYMTIVSLIG 419 Query: 443 GALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPV---DPGKAALWGLVTLLAAYV 499 A+F K D EE LLIV +L++ R RF R V D K ++ LVTL Y+ Sbjct: 420 AAIFNTLKGIDVEETFILLIVLAVLYMLRKRFVREKMEVSLSDIVKVFIFLLVTL---YL 476 Query: 500 YDLIATGIPPAILKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFILRPNRLTNK 559 Y + GI A K ++ I + +A A A V +LLI L NR N+ Sbjct: 477 YKNL--GILFAGAKEAFKPDFVVRNITQVKRSALAAAFFVPTFLLIG---SLIANRYRNE 531 Query: 560 -GASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVVLGDPI 618 A RL+ FL+ GN+L+H+ F GDK FF++ + + LI ++I + +VLGDPI Sbjct: 532 FPGQPANDKRLQNFLDEHGGNVLSHLGFLGDKQFFFSSDGKALILFSITGKRLIVLGDPI 591 Query: 619 GKENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVSLEHFTL 678 G + +QE AD + VFYQ+ ++ +YH+ GY FFKLGEEA+V L FT+ Sbjct: 592 GDPSSYRTVLQEFLAEADRFGYICVFYQIESKWMSLYHDFGYNFFKLGEEAVVDLNTFTI 651 Query: 679 SGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFSLGWFDE 738 +GK A +R+ NRFEREG+ F + +PP ++L ++L ++S WL GKKEKGFSLG+FD Sbjct: 652 TGKKRAGMRATFNRFEREGYTFSIHEPPFSDELYEELRKVSDAWLGGKKEKGFSLGYFDR 711 Query: 739 DYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLFVSLLKW 798 +Y +G+IIAF + P Y NG +LSVDLMR P P+G MD +F+ L +W Sbjct: 712 EYISRAPIATLSDADGKIIAFTTFMPVYQNG-SLSVDLMRYYPDAPSGIMDAIFIHLFQW 770 Query: 799 AKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEKFSPVWE 858 AKE Y FN+GMAPLS+VG + + E++A +F + + Y F GLR +KEK+ P W Sbjct: 771 AKENEYHSFNIGMAPLSNVGLSTQSFWSERVAAAIFNNVRYTYSFSGLRHFKEKYKPAWS 830 Query: 859 PRYLAYPSQVSXXXXXXXXXXXIARRPN 886 +YLA+ S I +R N Sbjct: 831 GKYLAFRKNHSLPITMLSVTKLIGKRKN 858 >ref|NP_655369.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_843939.1| virulence factor MprF [Bacillus anthracis str. Ames] gb|AAP25425.1| virulence factor MprF [Bacillus anthracis str. Ames] Length = 861 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 297/870 (34%), Positives = 446/870 (51%), Gaps = 32/870 (3%) Query: 27 QIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATVSLYDFV 86 +II P V+ ++++ +KE I + ++T+ ++ V L AV+T+ YD+V Sbjct: 13 KIIFPFVVLTIVFFQAKKELAGISFLEAINTIKNIPTGGVFLAITLGAFAVSTMFFYDYV 72 Query: 87 LRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTITASIAFL 146 + R+ + + + FR SWIANT N IGF G+ GA +RT LYR + SIA++ Sbjct: 73 MLRYLKADIPVQKIFRISWIANTLNGFIGFGGLVGAGVRTMLYRPYIKENGKLIKSIAWM 132 Query: 147 STITITGLSVLSWAGILGILPMQPVLQSHPWTIYAVWAAALYLPGYLILQRTSFYAKWLN 206 +T I GL++LS+ G++GIL +L PW + AL++P Y+ ++K N Sbjct: 133 TTAFINGLAILSFLGLIGILDTSFILHEKPWLWPVLIFFALFVPIYI------GFSKLKN 186 Query: 207 RNLPXXXXMDAA------TIAASVGASLLEWAFAGISFWLIGSCFLPALSLAQALGIYTL 260 R D T+ S+ SL+EW AGI ++I F + + LG+Y + Sbjct: 187 RKTKQAEGQDEGEEEKNPTVLYSL-VSLVEWVSAGIVMYVILILFGIDIEFQKFLGVYVI 245 Query: 261 SAITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVLAAF 320 +A+ G++S+ PGG+G FDL L GL Q G +G P+ +GL+ AAF Sbjct: 246 AALAGVVSLVPGGLGSFDLVFLTGLGQYGIDTGVLLPAMLLYRLVYYILPFCLGLIFAAF 305 Query: 321 DFARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLLLSA 380 + G + D L IW +G++G+W+ L +G++++LS Sbjct: 306 EMT-GVAIKKFEDKPFIAPALETTGVIWTLQRDF--LGKLGSWASAALTVFAGLMVILST 362 Query: 381 ATPGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRAYRLTLFFL 440 P NR L L++ S + KR+Y +T+ L Sbjct: 363 ILP---TSINRAHALHILAPKHLIQFSFSLSLTFGILLLILSRGIYYGTKRSYYMTIISL 419 Query: 441 CAGALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPV---DPGKAALWGLVTLLAA 497 A+F K D EE LLIV +L++ R RF R V D K ++ L+TL Sbjct: 420 IGAAVFNTLKGIDIEETFILLIVLAVLYMLRKRFVREKMEVSLSDIVKVFIFLLITL--- 476 Query: 498 YVYDLIATGIPPAILKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFILRPNRLT 557 Y+Y + GI A K ++ I + +A A A V +LLI L NR Sbjct: 477 YLYKNL--GILFAGAKEAFKPDFVVRNITQVKRSALAAAFFVPTFLLIG---SLIANRYR 531 Query: 558 NK-GASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVVLGD 616 N+ A RL+ FL+ GN+L+H+ F GDK FF++ + + L+ ++I + VVLGD Sbjct: 532 NEFPGQPANDKRLQNFLDEHGGNVLSHLGFLGDKQFFFSSDGKALLLFSITGKRLVVLGD 591 Query: 617 PIGKENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVSLEHF 676 PIG + +QE AD + VFYQ+ ++ +YH+ GY FFKLGEEA+V L F Sbjct: 592 PIGDPSSYRTVLQEFLAEADRFGYICVFYQIESKWMSLYHDFGYNFFKLGEEAVVDLNTF 651 Query: 677 TLSGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFSLGWF 736 T++GK A +R+ NRFEREG+ F + QPP +L ++L ++S WL GKKEK FSLG+F Sbjct: 652 TITGKKRAGMRATFNRFEREGYTFSIHQPPFSNELFEELRKVSDAWLGGKKEKSFSLGYF 711 Query: 737 DEDYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLFVSLL 796 D +Y +G+IIAF + P Y +G +LSVDLMR P P+G MD +F+ L Sbjct: 712 DHEYISRAPIATLSDADGKIIAFTTFMPVYQDG-SLSVDLMRYYPDAPSGIMDAIFIHLF 770 Query: 797 KWAKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEKFSPV 856 +WAKE Y FN+GMAPLS+VG + + E++A +F + + Y F GLR +KEK+ P Sbjct: 771 QWAKENEYHSFNIGMAPLSNVGLSTQSFWSERVAAAIFNNVRYTYSFSGLRHFKEKYKPA 830 Query: 857 WEPRYLAYPSQVSXXXXXXXXXXXIARRPN 886 W +YLA+ S I +R N Sbjct: 831 WSGKYLAFRKNHSLPITMLSVTKLIGKRKN 860 >ref|NP_977911.1| virulence factor MprF [Bacillus cereus ATCC 10987] gb|AAS40519.1| virulence factor MprF [Bacillus cereus ATCC 10987] Length = 861 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 297/870 (34%), Positives = 447/870 (51%), Gaps = 32/870 (3%) Query: 27 QIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATVSLYDFV 86 +II P V+ ++++ +KE I + ++T+ ++ V L AV+T+ YD+V Sbjct: 13 KIIFPFVVLTIVFFQAKKELAGISFLEAINTIKNIPTGGVFLAITLGAFAVSTMFFYDYV 72 Query: 87 LRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTITASIAFL 146 + R+ + + + FR SWIANT N IGF G+ GA +RT LYR + SIA++ Sbjct: 73 MLRYLKADIPVQKIFRISWIANTLNGFIGFGGLVGAGVRTMLYRPYIKENGKLIKSIAWM 132 Query: 147 STITITGLSVLSWAGILGILPMQPVLQSHPWTIYAVWAAALYLPGYLILQRTSFYAKWLN 206 +T I GL++LS+ G++GIL +L PW + AL++P Y+ ++K N Sbjct: 133 TTAFINGLAILSFLGLIGILDTSFILHEKPWLWPVLIFFALFVPIYI------GFSKLKN 186 Query: 207 RNLPXXXXMDA------ATIAASVGASLLEWAFAGISFWLIGSCFLPALSLAQALGIYTL 260 R D T+ S+ SL+EW AGI ++I F + + LG+Y + Sbjct: 187 RKPKQTEGQDEREEEKNPTVLYSL-VSLVEWVSAGIVMYVILILFGIDIEFQKFLGVYVI 245 Query: 261 SAITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVLAAF 320 +A+ G++S+ PGG+G FDL L GL Q G +G P+ +GL+ AAF Sbjct: 246 AALAGVVSLVPGGLGSFDLVFLTGLGQYGIDTGVLLPAMLLYRLVYYILPFCLGLIFAAF 305 Query: 321 DFARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLLLSA 380 + G + D L IW +G++G+W+ L +G++++LS Sbjct: 306 EMT-GVAIKKFEDKPFIAPALETTGVIWTLQRDF--LGKLGSWASAALTVFAGLMVILST 362 Query: 381 ATPGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRAYRLTLFFL 440 P NR L L++ S + KR+Y +T+ L Sbjct: 363 ILP---TSINRAHALHILAPKHLIQFSFSLSLTFGILLLILSRGIYYGTKRSYYMTIVSL 419 Query: 441 CAGALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPV---DPGKAALWGLVTLLAA 497 A+F K D EE LLIV +L++ R RF R V D K ++ L+TL Sbjct: 420 IGAAIFNTLKGIDIEETFILLIVLAVLYMLRKRFVREKMEVSLSDIVKVFIFLLITL--- 476 Query: 498 YVYDLIATGIPPAILKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFILRPNRLT 557 Y+Y + GI A K ++ I + +A A A V +LLI L NR Sbjct: 477 YLYKNL--GILFAGAKEAFKPDFVVRNITQVKRSALAAAFFVPTFLLIG---SLIANRYR 531 Query: 558 NK-GASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVVLGD 616 N+ A RL+ FL+ GN+L+H+ F GDK FF++ + + L+ ++I + VVLGD Sbjct: 532 NEFPGQPANDKRLQNFLDEHGGNVLSHLGFLGDKQFFFSSDGKALLLFSITGKRLVVLGD 591 Query: 617 PIGKENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVSLEHF 676 PIG + +QE AD + VFYQ+ ++ +YH+ GY FFKLGEEA+V L F Sbjct: 592 PIGDPSSYRTVLQEFLAEADRFGYICVFYQIESKWMSLYHDFGYNFFKLGEEAVVDLNTF 651 Query: 677 TLSGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFSLGWF 736 T++GK A +R+ NRFEREG+ F + QPP ++L ++L ++S WL GKKEK FSLG+F Sbjct: 652 TITGKKRAGMRATFNRFEREGYTFSIHQPPFSDELFEELRKVSDAWLGGKKEKSFSLGYF 711 Query: 737 DEDYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLFVSLL 796 D +Y +G+IIAF + P Y +G +LSVDLMR P P+G MD +F+ L Sbjct: 712 DREYISRAPIATLSDADGKIIAFTTFMPVYQDG-SLSVDLMRYYPDAPSGIMDAIFIHLF 770 Query: 797 KWAKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEKFSPV 856 +WAKE Y FN+GMAPLS+VG + + E++A +F + + Y F GLR +KEK+ P Sbjct: 771 QWAKENEYHSFNIGMAPLSNVGLSTQSFWSERVAAAIFNNVRYTYSFSGLRHFKEKYKPA 830 Query: 857 WEPRYLAYPSQVSXXXXXXXXXXXIARRPN 886 W +YLA+ S I +R N Sbjct: 831 WSGKYLAFRKNHSLPITMLSVTKLIGKRKN 860 >ref|ZP_00182694.1| hypothetical protein Exigu198101 [Exiguobacterium sp. 255-15] Length = 852 Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust. Identities = 279/874 (31%), Positives = 431/874 (49%), Gaps = 47/874 (5%) Query: 25 LVQIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATVSLYD 84 + +II+P +I FI+++GQ E R + ++ + + +LL L AVAT+ YD Sbjct: 11 VAKIILPIILIAFIFYQGQNELRSLSLKESIRAIQQIPSWKFILLIVSGLAAVATMFFYD 70 Query: 85 FVLRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTITASIA 144 F L R Q+ + FR SWIAN+ N +IGF G+AG +RT LYR + + +I Sbjct: 71 FFLLRSLQVKVPIGLIFRASWIANSFNGIIGFGGLAGMGVRTALYRPF-VEGTRLLKAIG 129 Query: 145 FLSTITITGLSVLSWAGILGILPMQPVLQSHPWTIYAVWAAALYLPGYLIL--QRTSFYA 202 +++ I+GLS+LS +L + P VL W + A + P YL+ +R S Sbjct: 130 WMAPTLISGLSILSALSLLNVFPAFEVLDLKKWLWPVIIGVAFFFPVYLLFTFRRGS--- 186 Query: 203 KWLNRNLPXXXXMDAATIAASVGASLLEWAFAGISFWLIGSCFLPALSLAQALGIYTLSA 262 + ++IA SL EW AG+ + I + +S ++ +G++ ++A Sbjct: 187 ----------SSIRPSSIALYSLVSLAEWFSAGVVVYFILAALGTDVSFSKVIGVFIIAA 236 Query: 263 ITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVLAAFDF 322 GL+SM PGG G FDL L+G+Q+ G G P+ IG++ +A +F Sbjct: 237 TAGLISMVPGGFGSFDLVFLIGMQRAGVEEGIVLTGLLIYRLVYYLIPFVIGVIFSAREF 296 Query: 323 ARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLLLSAAT 382 + G + D + IW R + ++ ++L + +GI + A Sbjct: 297 S-GPVVKMIEDKPIVGPSVEVGGVIWRLQLRF--LSKVRHFTLALITLLAGIAIWGLAIL 353 Query: 383 PGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRA----YRLTLF 438 P + ++ E L L+ L++ R KR+ Y ++ F Sbjct: 354 P---PNSTQYEYLEARLPHELLLLANSFFLMAGLLYVLLAPSLYRRTKRSLYMIYGVSAF 410 Query: 439 FLCAGALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPVDPGK---AALWGLVTL- 494 L AL + F+ +LIV +L+ +SR+ F R T + + AA G + L Sbjct: 411 ALIGMAL----RGFNLISLSVVLIVLVLVTMSRSAFHRERTLITTTRLIRAAFAGFLYLG 466 Query: 495 -LAAYVYDLIATGIPPAILKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFILRP 553 + Y G K +P++ M+ A+AAI LV + I LF Sbjct: 467 GFIFFGYAFYTLGSADGT-KVYPAHEIFMF------AASAAIFALVYTLVFIRLFNTFNQ 519 Query: 554 NRLTNKGASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVV 613 L K ++ +++ L E GN L+H+ F GDK FF++ + + I ++ ++ Sbjct: 520 PVLGEK----LDMQKVKDVLTEEGGNYLSHLAFLGDKRFFFSESGRSFIQFSQTGNRIMM 575 Query: 614 LGDPIGKENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVSL 673 LGDP G S+ I R + YQ+ + +YH+ G+ FFKLGEEA+V + Sbjct: 576 LGDPSGNPEEHSQLIACFLRRVEDLGYIPNIYQIQAQNMSLYHDFGFNFFKLGEEAIVDM 635 Query: 674 EHFTLSGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFSL 733 FT+SGK A LRS+ NRFEREG FEVV PP E L+ QL ++S +WL GK EKGFSL Sbjct: 636 TTFTVSGKKRAGLRSIKNRFEREGMTFEVVSPPFSEALLDQLRDVSDEWLGGKSEKGFSL 695 Query: 734 GWFDEDYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLFV 793 G+F+E Y N +++ F + P Y G LS+DLMR P PNG MD +F+ Sbjct: 696 GYFNESYLNQAPIGIMRDANQQMLGFMTFMPAYQEG-VLSIDLMRFRPDGPNGIMDAMFI 754 Query: 794 SLLKWAKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEKF 853 L +A EQGY FN+GMAPLSSVG+ +++ +E++A VF + + Y F GLR+YKEK+ Sbjct: 755 RLFDYATEQGYHTFNMGMAPLSSVGEDETSFWQERVAADVFNNIRYMYSFTGLRRYKEKY 814 Query: 854 SPVWEPRYLAYPSQVSXXXXXXXXXXXIARRPNK 887 P WE RYLAY + S I+++ ++ Sbjct: 815 DPKWEGRYLAYRKRQSLTIAILKATRLISKKKDR 848 >ref|NP_562163.1| conserved hypothetical protein [Clostridium perfringens] dbj|BAB80953.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 851 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 262/874 (29%), Positives = 424/874 (48%), Gaps = 67/874 (7%) Query: 27 QIIIPAAVILFIYWEGQKEFRRIDWAGTLHTLHHMKPATVLLLFGFALIAVATVSLYDFV 86 +I + VILFI E F+ + + + +L++ +I+ +S YDF+ Sbjct: 16 KIAFVSVVILFIVREFTSVFKNFNSEYFFMYRNKLDFLNLLIIAALGIISYIPLSFYDFI 75 Query: 87 LRRHFQIPLSFWETFRYSWIANTSNSVIGFSGIAGAALRTFLYRKRKIPAQTITASIAFL 146 L+R I L + ++YSWIA++ S++GF G A + + Y + + I + Sbjct: 76 LKRKVGIRLKNRKLYKYSWIASSIASLLGFGGATSLAFKQYFYGDYVDDKKKLLKEIGKI 135 Query: 147 STITITGLSVL--SWAGI-------LGILPMQPVLQSHPWTIYAVWAAALYLPGYLILQR 197 + +TGLS++ ++ GI LGI+ YA+ ALY PG++I Sbjct: 136 VALNLTGLSIVCCTYMGIRISSWNNLGIIK------------YAIGIIALYAPGFIIYSA 183 Query: 198 TSFYAKWLNRNLPXXXXMDAATIAASVGASLLEWAFAGISFWLIGSCFLPALSLAQALGI 257 Y+K ++ ++ + + S LEW I + ++S+ L I Sbjct: 184 YK-YSKTKDK-------LEFFSTLGIIFISFLEWLTTIILIYATLRITGASISVLTFLPI 235 Query: 258 YTLSAITGLLSMAPGGIGGFDLTALLGLQQLGYPSGKTXXXXXXXXXXXXXXPWGIGLVL 317 Y +A+ G++SM PGGIG FDLT + GL+ LG P +T P IG++L Sbjct: 236 YIEAAVVGMISMIPGGIGTFDLTFMTGLEVLGIPIEQTLLVIILYRISYYIVPALIGVLL 295 Query: 318 AAFDFARGREGEDGRDNAGYESVLNNWQKIWLFPTRLGVVGEIGAWSLGKLVFASGIVLL 377 DF G+ N + + P +V ++ + LVF SG +++ Sbjct: 296 FVHDFG-------GKINKKFNGL----------PYE--IVSKVAYKIVVSLVFISGAIIV 336 Query: 378 LSAATPGLXXXXNRLQFAEELLSAPLMRLSHQXXXXXXXXXXXXXXXXXHRVKRAYRLTL 437 LS P +++ +E+L ++ LS +R K Y+ ++ Sbjct: 337 LSNIAPQYLL---KIKLLKEILGKQVLGLSIGMSVVLGFLIMLAALMLKYRAKSIYKASM 393 Query: 438 FFLCAGALFTFTKAFDFEEAIFLLIVALLLWISRNRFFRVATPVDPGKAALWGLVTLLAA 497 G + + TK + E +FL+IVA LL++S+ F+R + V K L L+A+ Sbjct: 394 VLFILGIILSLTKGINPYELVFLIIVAYLLYLSKRMFYRDSFVVSC-KNTLIDSGILIAS 452 Query: 498 YVYDLIATGIPPAILKHWPSNAKLMWLINPKQHAAAAIAGLVMAWLLITLFFI----LRP 553 + I IL + ++ K + ++ + A G + A+ L+T+ ++ L Sbjct: 453 F-------SIYFFILITFGTHLKYVGIVRKMPYKMAYKFGFI-AFALVTVIYVAIYFLNI 504 Query: 554 NRLTNKGASDAELARLRKFLEHEQGNLLTHVLFAGDKSFFWACNDQVLIPYAIVRREFVV 613 R D + K +E +G+ LTH++F DK + + + I Y + + V Sbjct: 505 RRKIPVKTFDQCSEYVEKIIEEYKGDSLTHLVFLKDKYIYLNEDKDLFIQYEVYGDKLFV 564 Query: 614 LGDPIGK-ENLVSEAIQESQRFADLYDLTVVFYQVSPHYLPIYHENGYRFFKLGEEALVS 672 LG+P+G ENL E I++ +AD Y T VFYQV+ + H NGY F K+GEEA V Sbjct: 565 LGNPVGNNENLFRE-IEKFCEYADNYGYTPVFYQVNDEMISYLHSNGYDFMKIGEEAKVD 623 Query: 673 LEHFTLSGKPSASLRSVTNRFEREGFRFEVVQPPHPEDLMKQLYEISQKWLDGKKEKGFS 732 ++ F + G SL++ ++ +EG+ F +V+PP ++ + L EIS +WLDG+KEKGFS Sbjct: 624 VKEFKVVGNKMKSLKTSRSKVTKEGYTFHMVEPPFSKEFLDSLREISDEWLDGRKEKGFS 683 Query: 733 LGWFDEDYXXXXXXXXXXXPNGEIIAFASLAPGYDNGNTLSVDLMRNLPVKPNGTMDHLF 792 +G+FDEDY GEI AFA++ YDN + SVDLMR P G MD +F Sbjct: 684 VGFFDEDYLNKAPIAILKDREGEIKAFANIMYMYDN-ESFSVDLMRFSKNTPRGVMDFMF 742 Query: 793 VSLLKWAKEQGYAYFNLGMAPLSSVGQTQSAIREEKLAHLVFKHGGHWYGFLGLRKYKEK 852 ++L+++ KE GY FN+GMAPL++VG ++ A EKLA +++G Y F GLR++KEK Sbjct: 743 INLIEYGKENGYEIFNMGMAPLANVGLSKYAFWNEKLALQFYENGQALYSFKGLRRFKEK 802 Query: 853 FSPVWEPRYLAYPSQVSXXXXXXXXXXXIARRPN 886 FS WE +Y+AY S +R N Sbjct: 803 FSHNWEYKYIAYRRNTSILITVIQAAIVCSRNRN 836 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.325 0.140 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,242,953,192 Number of extensions: 50020277 Number of successful extensions: 142560 Number of sequences better than 1.0e-05: 88 Number of HSP's gapped: 142268 Number of HSP's successfully gapped: 104 Length of query: 888 Length of database: 757,237,578 Length adjustment: 135 Effective length of query: 753 Effective length of database: 390,699,213 Effective search space: 294196507389 Effective search space used: 294196507389 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 131 (55.1 bits)