BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0157.0020.p (619 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_389316.1| similar to ABC transporter (ATP-binding protein... 704 0.0 ref|NP_241992.1| ABC transporter (ATP-binding protein) [Bacillus... 699 0.0 ref|NP_692327.1| ABC transporter ATP-binding protein [Oceanobaci... 686 0.0 ref|NP_786841.1| ABC transporter, ATP-binding and permease prote... 545 e-153 ref|NP_469500.1| similar to ABC transporter, ATP-binding protein... 536 e-151 >ref|NP_389316.1| similar to ABC transporter (ATP-binding protein) [Bacillus subtilis] pir||A69858 ABC transporter (ATP-binding protein) homolog yknV - Bacillus subtilis emb|CAB13306.1| yknV [Bacillus subtilis subsp. subtilis str. 168] gb|AAC24907.1| YknV [Bacillus subtilis] Length = 604 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/600 (56%), Positives = 455/600 (75%), Gaps = 5/600 (0%) Query: 18 AQEQSLEERFVYKDDDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLVMMILGTVTKLTVP 77 A++Q + ERF Y D++I+K F+W Q RL SY+KPY + +LPL + +++GT KL +P Sbjct: 4 AKKQGVLERFYYSSDEIIEKPFNWAQMWRLLSYVKPYRKTILPLSFLTVLIGTAVKLVIP 63 Query: 78 YLTSM-AIDKAIAPKSGNPSLTLLYTLTAIVIVLYLIQWIAGVYRIKYTNVIGQRVIYDL 136 L + +D+AI ++ LL L I+ LY++ + A V RI++ N +GQ VIYDL Sbjct: 64 ILIGVYVLDQAITGRNSE----LLIQLIFIISGLYVLNYAANVLRIRWMNQLGQHVIYDL 119 Query: 137 RSDLFRHIQKLSFNFFDKRPAGSVLVRVTNDINSLQDLFTNGVVNLMIDCVQLLGIMVIL 196 R LF H+Q+LS FFD+R AGS+LVR+ NDINSLQ+LFT+GV+NL+ D + L G+++IL Sbjct: 120 RQHLFTHVQRLSHRFFDQRSAGSILVRIMNDINSLQELFTSGVINLLTDLLLLAGVIIIL 179 Query: 197 LLINWKLGLAVMITVPIMFFVSTKLRQKIRIAWQDVRMKNSRINSHLNESIQGIRVTQAY 256 ++ +L +A+M+T+PIMFF+ST LR+KIR +WQ VR+K S++NSHLNESIQGIRVTQA+ Sbjct: 180 FTLSPELTIAIMVTLPIMFFISTSLRKKIRRSWQTVRLKQSKLNSHLNESIQGIRVTQAF 239 Query: 257 TQEKENMNYFDAMNMDSRKSWNKASAMNQAFGPIIEITGGFGTMILFWFGAYLIQTGELT 316 TQE+ENM YFD +N ++ +SW +A+ N F P++E+T GT +L W+GA LI +T Sbjct: 240 TQEEENMAYFDGVNQENYESWREATRKNAMFRPLVEMTNAIGTAVLIWYGATLIMNETIT 299 Query: 317 VGFLVAFSSYVSNFWDPINRLGQMYNQLLVAMASSERIFEYLDEQPSVQDNPGATPLPKI 376 +G V+F+ Y+ FW+PI+RLGQ+YNQLL+ MASSERIFE+LDEQP+V++ P A KI Sbjct: 300 IGVFVSFAFYLGMFWEPISRLGQVYNQLLMGMASSERIFEFLDEQPNVKEKPNAIHNEKI 359 Query: 377 KGDIKFNKVVFEYEKGRAALKGIDLDVKAGQSIALVGHTGSGKSTIINLIGRFYDIKSGS 436 G+I F +V F Y++ R AL + + AG ++ALVGHTGSGK+TI NLI RFYD G+ Sbjct: 360 NGEISFEEVEFSYDEKRKALHAVSFSIPAGSTLALVGHTGSGKTTIANLISRFYDAAGGT 419 Query: 437 ITIDGQDTREVTLQSLREQIGIVLQDTFIFSGTIRDNIRFGRLDATDQEVEEAAKAVDAH 496 I IDG ++++L SLR QI IVLQDTFIFSGTI +NIRFGR +A+D+EV +A++AV A Sbjct: 420 IKIDGIPIKDLSLASLRSQISIVLQDTFIFSGTIMENIRFGRPNASDEEVMKASQAVGAD 479 Query: 497 EFISKLPGGYDTEVEERGSALSMGQRQLLSFARALLANPRILILDEATASIDTETEIKIQ 556 EFIS L GY TEVEERGS LS GQRQL+SFARALLA+P I+ILDEATASIDTETE+KIQ Sbjct: 480 EFISDLAEGYATEVEERGSVLSAGQRQLISFARALLADPAIIILDEATASIDTETEVKIQ 539 Query: 557 EALKILLQGRTSFIVAHRLSTIRHADKIVVLDHGEIKEEGTHAELTAHDGIYNGLIEAQF 616 +ALK LL+GRT+ ++AHRLSTIR AD+I+VLDHG EEG H +L A GIY GL++AQ+ Sbjct: 540 QALKTLLKGRTAVMIAHRLSTIRDADRIIVLDHGRKIEEGNHDQLLAKGGIYAGLVKAQY 599 >ref|NP_241992.1| ABC transporter (ATP-binding protein) [Bacillus halodurans] pir||F83790 ABC transporter (ATP-binding protein) BH1126 [imported] - Bacillus halodurans (strain C-125) dbj|BAB04845.1| ABC transporter (ATP-binding protein) [Bacillus halodurans] Length = 601 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/592 (58%), Positives = 455/592 (76%), Gaps = 5/592 (0%) Query: 26 RFVYKDDDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLVMMILGTVTKLTVPYLTS-MAI 84 RF Y D VI+K F+W Q RL +YMKPYA +LP +V M++ T +L VP + +AI Sbjct: 9 RFHYASDQVIEKPFNWAQMMRLLTYMKPYAASLLPKTVVAMLIVTAVRLFVPIIIGVLAI 68 Query: 85 DKAIAPKSGNPSLTLLYTLTAIVIVLYLIQWIAGVYRIKYTNVIGQRVIYDLRSDLFRHI 144 D AIA +G+ L ++Y L A+V+ LY I ++A V+RI++ N IGQ VIYD+R+DLF HI Sbjct: 69 DHAIA--AGD--LNVMYQLAALVLGLYSISYVANVFRIRWMNEIGQHVIYDIRADLFNHI 124 Query: 145 QKLSFNFFDKRPAGSVLVRVTNDINSLQDLFTNGVVNLMIDCVQLLGIMVILLLINWKLG 204 Q+LS FFD+R AGS+LVRV ND+NSLQDLFTNGV+NL++D V LLGI+VIL ++ +L Sbjct: 125 QRLSHRFFDQRSAGSILVRVVNDVNSLQDLFTNGVINLLMDIVILLGIIVILFSLSPELA 184 Query: 205 LAVMITVPIMFFVSTKLRQKIRIAWQDVRMKNSRINSHLNESIQGIRVTQAYTQEKENMN 264 + ++I +PIMFF+STKLR+ IR +WQ VR++ S++NSHLNESIQGIRVTQA++QEKENM Sbjct: 185 ILILIVLPIMFFISTKLRRNIRRSWQTVRLRQSKLNSHLNESIQGIRVTQAFSQEKENMR 244 Query: 265 YFDAMNMDSRKSWNKASAMNQAFGPIIEITGGFGTMILFWFGAYLIQTGELTVGFLVAFS 324 +F +N ++ +SW A+ MN F P +E+ G ++L W+G LIQ+ LTVG V+F+ Sbjct: 245 FFRDINEENFQSWKDATRMNALFRPFVEMASAIGAVVLIWYGVSLIQSEVLTVGVFVSFA 304 Query: 325 SYVSNFWDPINRLGQMYNQLLVAMASSERIFEYLDEQPSVQDNPGATPLPKIKGDIKFNK 384 Y+ FW+PI+RLGQ+YNQLLV MASSERIFE+LDE+PSV + A L +++G + F + Sbjct: 305 FYLGMFWEPISRLGQVYNQLLVGMASSERIFEFLDEKPSVPEKENAVTLHEMRGHVTFEQ 364 Query: 385 VVFEYEKGRAALKGIDLDVKAGQSIALVGHTGSGKSTIINLIGRFYDIKSGSITIDGQDT 444 V F Y+ R AL I ++KAGQ+IALVGHTGSGKSTI+NLI RFYD +G I IDG D Sbjct: 365 VEFSYDDKRKALNDISFEIKAGQTIALVGHTGSGKSTIVNLISRFYDPTAGVIKIDGVDL 424 Query: 445 REVTLQSLREQIGIVLQDTFIFSGTIRDNIRFGRLDATDQEVEEAAKAVDAHEFISKLPG 504 R++ L SLR + VLQDTFIF+GTI +NIRFGR ATD+EV+ AA+A+ A++FI +LP Sbjct: 425 RDIQLNSLRTNVSFVLQDTFIFAGTIMENIRFGRPTATDEEVKAAAEAIGANDFIERLPN 484 Query: 505 GYDTEVEERGSALSMGQRQLLSFARALLANPRILILDEATASIDTETEIKIQEALKILLQ 564 GYDTEVEE+G+ LS+G+RQLLSFARALLA+P+ILILDEATASIDTETE+KIQ LK LL Sbjct: 485 GYDTEVEEKGNVLSVGERQLLSFARALLADPKILILDEATASIDTETELKIQAGLKKLLH 544 Query: 565 GRTSFIVAHRLSTIRHADKIVVLDHGEIKEEGTHAELTAHDGIYNGLIEAQF 616 RT+ ++AHRLSTIR AD+I+VL+ G+I E+GTH+EL G Y GL++AQ+ Sbjct: 545 DRTAIMIAHRLSTIRDADQIIVLEQGDIIEQGTHSELMDARGTYYGLVKAQY 596 >ref|NP_692327.1| ABC transporter ATP-binding protein [Oceanobacillus iheyensis HTE831] dbj|BAC13362.1| ABC transporter ATP-binding protein [Oceanobacillus iheyensis HTE831] Length = 610 Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/610 (55%), Positives = 449/610 (73%), Gaps = 5/610 (0%) Query: 11 AKIKQSTAQEQSLEERFVYKDDDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLVMMILGT 70 AK K + E +RF Y D I+K F+W+Q RL ++KPY++ LP ++ M++ T Sbjct: 2 AKNKDNLKSESKHLQRFHYTIDQAIEKPFNWQQMWRLLQFLKPYSKTYLPGAVLAMMVST 61 Query: 71 VTKLTVPYLT-SMAIDKAIAPKSGNPSLTLLYTLTAIVIVLYLIQWIAGVYRIKYTNVIG 129 +L +P L +A D AIA N TLL L + VLY I ++A +RIK+ N++G Sbjct: 62 AIRLAIPILIGKVAFDVAIA----NKDTTLLTYLVIGIAVLYSISFVANTFRIKWVNILG 117 Query: 130 QRVIYDLRSDLFRHIQKLSFNFFDKRPAGSVLVRVTNDINSLQDLFTNGVVNLMIDCVQL 189 Q VIYDLR LF H+Q+LS FFD R AGS+LVR+ NDINSLQ+LFTNG++NL++D + L Sbjct: 118 QNVIYDLRQKLFSHVQRLSHRFFDSRSAGSILVRILNDINSLQELFTNGIINLLMDLLML 177 Query: 190 LGIMVILLLINWKLGLAVMITVPIMFFVSTKLRQKIRIAWQDVRMKNSRINSHLNESIQG 249 GI+VIL +++ L LAV+I +P+MF +ST LR+KIR +WQ VR+ SR+NSHLNE IQG Sbjct: 178 SGILVILFVLSPPLALAVIIIIPLMFLISTTLRRKIRRSWQVVRLHQSRMNSHLNEGIQG 237 Query: 250 IRVTQAYTQEKENMNYFDAMNMDSRKSWNKASAMNQAFGPIIEITGGFGTMILFWFGAYL 309 +R+TQ+++QEKEN +FD +N +S+ A+ + F P+++I GT+IL +GAYL Sbjct: 238 MRITQSFSQEKENAEFFDGVNSGFFQSFRDAAKKSAMFRPLVDICDAAGTIILISYGAYL 297 Query: 310 IQTGELTVGFLVAFSSYVSNFWDPINRLGQMYNQLLVAMASSERIFEYLDEQPSVQDNPG 369 I G +TVG V+F+ ++ FW+PI+RLGQMYNQLL+AMASSERIFE+LDE+P+V + Sbjct: 298 ILNGTITVGTFVSFAFFLGMFWEPISRLGQMYNQLLMAMASSERIFEFLDERPNVAEKNN 357 Query: 370 ATPLPKIKGDIKFNKVVFEYEKGRAALKGIDLDVKAGQSIALVGHTGSGKSTIINLIGRF 429 A + +++G+I+F+KV F Y K R ALK + + + AG++IALVGHTGSGKSTI NLI RF Sbjct: 358 ALQMEEMRGEIEFDKVEFSYNKDRIALKKLSIHIHAGETIALVGHTGSGKSTIANLISRF 417 Query: 430 YDIKSGSITIDGQDTREVTLQSLREQIGIVLQDTFIFSGTIRDNIRFGRLDATDQEVEEA 489 YD SG++ IDG D R+VT+ SLR++I +VLQDTFIFSGTI +NIRFGR +ATD+EV +A Sbjct: 418 YDPTSGAVKIDGSDLRDVTIDSLRQKISVVLQDTFIFSGTIMENIRFGRPNATDEEVIDA 477 Query: 490 AKAVDAHEFISKLPGGYDTEVEERGSALSMGQRQLLSFARALLANPRILILDEATASIDT 549 AK V A +FI +L GY TEVEERG+ LS G+RQLLSFARALLANP I+ILDEATASIDT Sbjct: 478 AKVVGADDFIQRLADGYQTEVEERGNILSAGERQLLSFARALLANPSIIILDEATASIDT 537 Query: 550 ETEIKIQEALKILLQGRTSFIVAHRLSTIRHADKIVVLDHGEIKEEGTHAELTAHDGIYN 609 E+E+KIQ+ALK LL+GRTS I+AHRLSTIR AD I VL+ GE+ E+G H L G Y Sbjct: 538 ESEVKIQQALKRLLKGRTSIIIAHRLSTIREADNIFVLEQGEVLEQGNHQSLIQQKGKYY 597 Query: 610 GLIEAQFRFL 619 L+++QF L Sbjct: 598 ELVKSQFTML 607 >ref|NP_786841.1| ABC transporter, ATP-binding and permease protein [Lactobacillus plantarum WCFS1] emb|CAD65719.1| ABC transporter, ATP-binding and permease protein [Lactobacillus plantarum WCFS1] Length = 603 Score = 545 bits (1403), Expect = e-153, Method: Compositional matrix adjust. Identities = 275/600 (45%), Positives = 405/600 (67%), Gaps = 9/600 (1%) Query: 22 SLEERFVYKDDDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLVMMILGTVTKLTVPYLTS 81 S+ +R Y +D+ + F+W + RL Y++PY+ + L VL+ +++G + + PYL Sbjct: 7 SVTKRNTYNEDEELTSRFNWHDYARLGHYLRPYSWR-LCFVLITILIGNIAIILGPYLMK 65 Query: 82 MAIDKAIAPKSGNPSLTLLYTLTAIVIVLYLIQWIAGVYRIKYTNVIGQRVIYDLRSDLF 141 +AID AI N +L L++ L+ ++ +I ++ YRI IGQ ++ D+R+DLF Sbjct: 66 IAIDTAIP----NRNLPLIWALSGTFLISLVIAFLCFRYRIWAITEIGQSLLIDMRTDLF 121 Query: 142 RHIQKLSFNFFDKRPAGSVLVRVTNDINSLQDLFTNGVVNLMIDCVQLLGIMVILLLINW 201 H+Q+L F +FD RP G +L+RV N IN+L DL NG+VNL+ D + +L ++ + INW Sbjct: 122 THLQELPFAYFDSRPHGKILIRVVNYINTLSDLLANGLVNLISDIISVLVTLIFMFAINW 181 Query: 202 KLGLAVMITVPIMFFVSTKLRQKIRIAWQDVRMKNSRINSHLNESIQGIRVTQAYTQEKE 261 +L L + +P++ + +++K R A++ + K S +N++++ESI GI+VTQ + QE Sbjct: 182 QLTLDSLALIPVLVLWAYLIQKKQRQAFRKLSDKQSNLNAYIHESIAGIKVTQGFAQEAN 241 Query: 262 NMNYFDAMNMDSRKSWNKASAMNQAFGPIIEITGGFGTMILFWFGAYLIQTGEL-TVGFL 320 + FDA+ D+R+++ +A + A GP ++ T ++++ G + Q G + + G L Sbjct: 242 AIQTFDAVADDNRRAYMQAVKIQYALGPGVQNISTITTALIYFIG--IQQLGVVVSTGTL 299 Query: 321 VAFSSYVSNFWDPINRLGQMYNQLLVAMASSERIFEYLDEQPSVQDNPGATPLPKIKGDI 380 +AF Y++NFW+P+ +G YN L+ A A ERIFE +DE+P + D P A LP IKGD+ Sbjct: 300 IAFLGYINNFWNPVINIGNFYNSLITATAYLERIFETMDEKPQILDAPDAFNLPPIKGDV 359 Query: 381 KFNKVVFEYEKGRA-ALKGIDLDVKAGQSIALVGHTGSGKSTIINLIGRFYDIKSGSITI 439 +FN V F YE+ L I +AGQ+IALVG TG+GK+TIINL+ RFY++ +G+ITI Sbjct: 360 RFNNVSFRYEEASPLTLHDISFHAQAGQTIALVGPTGAGKTTIINLLSRFYNVTTGNITI 419 Query: 440 DGQDTREVTLQSLREQIGIVLQDTFIFSGTIRDNIRFGRLDATDQEVEEAAKAVDAHEFI 499 D + ++VTL SLR+Q+G++ Q+TFIFSGTI DNIR+GRLDATD EV AAK A FI Sbjct: 420 DNINLQQVTLDSLRQQMGVMQQETFIFSGTIMDNIRYGRLDATDDEVRSAAKIARADAFI 479 Query: 500 SKLPGGYDTEVEERGSALSMGQRQLLSFARALLANPRILILDEATASIDTETEIKIQEAL 559 LP GY+T V+E GS+LS GQRQLL+FAR LLA+PRILILDEATA+IDT+TE +QE L Sbjct: 480 QTLPSGYNTTVQEHGSSLSAGQRQLLAFARVLLADPRILILDEATAAIDTKTETLLQEGL 539 Query: 560 KILLQGRTSFIVAHRLSTIRHADKIVVLDHGEIKEEGTHAELTAHDGIYNGLIEAQFRFL 619 LL+GRTSFIVAHRLSTI+ AD+I+V++HG I E G H +L A G Y L ++Q++ L Sbjct: 540 NELLKGRTSFIVAHRLSTIQRADQILVINHGRIVEAGRHDQLMAMHGEYYRLYDSQYQML 599 >ref|NP_469500.1| similar to ABC transporter, ATP-binding protein [Listeria innocua] pir||AD1452 ABC transporter, ATP-binding protein homolog lin0155 [imported] - Listeria innocua (strain Clip11262) emb|CAC95388.1| lin0155 [Listeria innocua] Length = 593 Score = 536 bits (1381), Expect = e-151, Method: Compositional matrix adjust. Identities = 268/590 (45%), Positives = 400/590 (67%), Gaps = 10/590 (1%) Query: 32 DDVIDKAFDWKQFTRLFSYMKPYARQMLPLVLVMMILGTVTKLTVPYLTSMAIDKAIAPK 91 D+ ++ AF R+ Y+KPY + + + L +++L V + PYLT + ID+ I Sbjct: 9 DEELETAFSAAHLKRILVYVKPYQKSIY-ITLFVILLANVATMIGPYLTKVVIDETIP-- 65 Query: 92 SGNPSLTLLYTLTAIVIVLYLIQWIAGVYRIKYTNVIGQRVIYDLRSDLFRHIQKLSFNF 151 N ++T L+ + I IV ++ + YRI+ +IGQ ++ D+R+ +F H+QKL F++ Sbjct: 66 --NKNMTQLFWIAVIFIVSVIVTGLCMRYRIRSITLIGQDILKDMRTAIFGHLQKLPFSY 123 Query: 152 FDKRPAGSVLVRVTNDINSLQDLFTNGVVNLMIDCVQLLGIMVILLLINWKLGLAVMITV 211 FD RP G +L+RV N IN L DL +NG++NL+ D + ++ + +L+I+ L L + + Sbjct: 124 FDSRPHGKILIRVVNYINMLSDLLSNGLINLISDILSVIVTLGFMLMIDPVLTLYSLALI 183 Query: 212 PIMFFVSTKLRQKIRIAWQDVRMKNSRINSHLNESIQGIRVTQAYTQEKENMNYFDAMNM 271 P++F + ++ R A+Q + K S +N++++ESI GI+VTQ++++E+EN F ++ Sbjct: 184 PVLFVIVMVIKTAQRKAYQVLSNKQSNMNAYIHESIAGIKVTQSFSREEENFEIFTEVSN 243 Query: 272 DSRKSWNKASAMNQAFGPIIEITGGFGTMILFWFG--AYLIQTGELTVGFLVAFSSYVSN 329 + R+SW KA + P ++ T ++++ G Y + +++ G L+AF YV N Sbjct: 244 EYRRSWMKAVKIQFLLWPGVQNIAVMTTCLIYFVGIKGYGV---DVSTGTLIAFIGYVGN 300 Query: 330 FWDPINRLGQMYNQLLVAMASSERIFEYLDEQPSVQDNPGATPLPKIKGDIKFNKVVFEY 389 FW+P+ +G YN L+ A ERIFE +D +P ++D P A +P I G++ F V F Y Sbjct: 301 FWNPVINIGNFYNSLITATTYLERIFETMDVEPDIKDVPNAKKMPPIVGNVDFKDVYFRY 360 Query: 390 EKGRAALKGIDLDVKAGQSIALVGHTGSGKSTIINLIGRFYDIKSGSITIDGQDTREVTL 449 E+G LKGI+ V AG+SIALVG TG+GK+TIINL+ RFY+I SG I +DG++ EVTL Sbjct: 361 EEGVDILKGINFHVDAGESIALVGPTGAGKTTIINLLSRFYNINSGEILVDGENVEEVTL 420 Query: 450 QSLREQIGIVLQDTFIFSGTIRDNIRFGRLDATDQEVEEAAKAVDAHEFISKLPGGYDTE 509 +SLR Q+G++LQDTFIFSGTI +NIR+G+LDAT++E+ AAK V AH+FIS L GY TE Sbjct: 421 RSLRSQMGVMLQDTFIFSGTIIENIRYGKLDATEEEIIAAAKVVRAHDFISGLKDGYYTE 480 Query: 510 VEERGSALSMGQRQLLSFARALLANPRILILDEATASIDTETEIKIQEALKILLQGRTSF 569 V+ERGS LS GQRQL+SFARALLA+P+ILILDEAT+SIDT+TEI +QE L+ LL+GRTSF Sbjct: 481 VKERGSTLSAGQRQLISFARALLADPKILILDEATSSIDTQTEILLQEGLERLLEGRTSF 540 Query: 570 IVAHRLSTIRHADKIVVLDHGEIKEEGTHAELTAHDGIYNGLIEAQFRFL 619 I+AHRLSTI+++ +I +D+G I+E G+H EL A G Y L ++QF L Sbjct: 541 IIAHRLSTIKNSSRIFYIDNGRIQEAGSHEELMAQHGYYYNLYQSQFDML 590 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.322 0.137 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 847,098,620 Number of extensions: 34650043 Number of successful extensions: 172538 Number of sequences better than 1.0e-05: 17918 Number of HSP's gapped: 153743 Number of HSP's successfully gapped: 19096 Length of query: 619 Length of database: 757,237,578 Length adjustment: 132 Effective length of query: 487 Effective length of database: 398,844,510 Effective search space: 194237276370 Effective search space used: 194237276370 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)