BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0149.0031.p (558 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_830543.1| Potassium-transporting ATPase A chain [Bacillus... 636 0.0 ref|NP_654684.1| hypothetical protein predicted by GeneMark [Bac... 632 e-180 ref|NP_977133.1| potassium-transporting ATPase, A subunit [Bacil... 630 e-179 ref|NP_350263.1| K+-transporting ATPase, a chain [Clostridium ac... 486 e-136 ref|NP_569205.1| pli0052 [Listeria innocua] >gi|16415835|emb|CAC... 472 e-131 >ref|NP_830543.1| Potassium-transporting ATPase A chain [Bacillus cereus ATCC 14579] gb|AAP07744.1| Potassium-transporting ATPase A chain [Bacillus cereus ATCC 14579] Length = 555 Score = 636 bits (1640), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/540 (59%), Positives = 388/540 (71%), Gaps = 5/540 (0%) Query: 21 RPAGLYMAQVFNYERTGLDRWFGWLEKPVYAIGGIRKENYNWKQYALAAVLSNAMMMLLV 80 +P G+Y+ + F +T LD+ FG EK ++ I G++ N WKQYAL+ VL N M+++V Sbjct: 18 KPTGIYLEKAFQGSKT-LDKVFGPFEKLIFKITGVKAYNQTWKQYALSLVLLNGFMIVVV 76 Query: 81 YLIFRFQGALPLNPSGIASMEPTLAFNTVISFMANTNLQHYSGESGLSYLSQMLAIVFMM 140 Y IFR QG LPLNP+ I MEPTLAFNT ISFMA+TNLQHYSGE+GLSYLSQ++ I F+M Sbjct: 77 YFIFRLQGVLPLNPAHIEGMEPTLAFNTAISFMADTNLQHYSGENGLSYLSQLIGITFLM 136 Query: 141 FTSPATGLAVGIAIIRGLTGKPLGNFFVDMVRAITRIXXXXXXXXXXXXXXXXXXQTLEP 200 F +PAT LA+ +A IRGL GK LGNFFVD RA+TR+ QTL+ Sbjct: 137 FAAPATTLALVMAFIRGLAGKELGNFFVDFTRALTRVFLPIAFIAALVFVALGVPQTLDG 196 Query: 201 TALGHTLEGVTQEIARGPVASFLSIKELXXXXXXXXXVNSAHPFENPDAISNXXXXXXXX 260 T+EG Q I RGPVASF+SIKEL NS HPFENP +SN Sbjct: 197 AVTAQTIEGAKQSILRGPVASFVSIKELGNNGGGFFGANSTHPFENPGQMSNILQMMLMM 256 Query: 261 XXXXXXPFTYGKMVGNKKQGRVLFVSMAMMFIV-FLGISLASENAGNPAVNALGIQHQQG 319 PFTYG+MVGNKKQGR+LFVS+ M+F++ F+ I+ SE GNPA+N +GI+H QG Sbjct: 257 LLPTALPFTYGRMVGNKKQGRILFVSLFMVFLLGFITIT-TSELNGNPALNGMGIEHVQG 315 Query: 320 SMEGKEARFGVAQSALYSVVTTASETGAVNTMHDTLTPIGGLITIGNMMLNTXXXXXXXX 379 S EGKE RFG S+LY+ VTTA+ETGAVNTMHDTLTPIGGL+ + NMMLNT Sbjct: 316 STEGKEVRFGTVFSSLYATVTTAAETGAVNTMHDTLTPIGGLVPLVNMMLNTVYGGVGAG 375 Query: 380 XXNVLMYTMIAVFLSGLMVGRTPEFLGKKIEGKEMKLIAVTLIINPMXXXXXXXXXXXXQ 439 N++MY +IAVF+SGLMVGRTPEFLGKKIEGKEMKLIAVT++ +P+ Sbjct: 376 FVNIIMYAIIAVFISGLMVGRTPEFLGKKIEGKEMKLIAVTILFHPLLILGFSALALSTN 435 Query: 440 --SDTLSNPGFHGLTQALYEFTSSAANNGSGFEGLGDATPFWNISTGIVMFLGRYFSIIA 497 +D +S+ GFHGLTQ +YE+TSSAANNGSGFEGLGD TPFWNI+TG+VMFLGRYFS+I Sbjct: 436 LGTDAISHSGFHGLTQVVYEYTSSAANNGSGFEGLGDNTPFWNITTGLVMFLGRYFSLIT 495 Query: 498 MLAVAGSLAAKKTVPETSGTFRTDKALFGAVFLGTVLIVGALTFFPALALGPIAEFLTLK 557 MLAVA SL K VPET GTFRTD +LFG +F+GT++IVGALTFFP L LGPIAEFLTLK Sbjct: 496 MLAVAASLKEKTVVPETVGTFRTDNSLFGGIFIGTIVIVGALTFFPMLVLGPIAEFLTLK 555 >ref|NP_654684.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_843264.1| potassium-transporting ATPase, A subunit [Bacillus anthracis str. Ames] gb|AAP24750.1| potassium-transporting ATPase, A subunit [Bacillus anthracis str. Ames] Length = 555 Score = 632 bits (1631), Expect = e-180, Method: Compositional matrix adjust. Identities = 319/540 (59%), Positives = 388/540 (71%), Gaps = 5/540 (0%) Query: 21 RPAGLYMAQVFNYERTGLDRWFGWLEKPVYAIGGIRKENYNWKQYALAAVLSNAMMMLLV 80 +P G+Y+ + F + LD+ FG EK ++ I G+++ N WKQYAL+ VL N M+++V Sbjct: 18 KPTGIYLEKAFQGSKK-LDKVFGPFEKLIFKITGVKEYNQTWKQYALSLVLLNGFMIVVV 76 Query: 81 YLIFRFQGALPLNPSGIASMEPTLAFNTVISFMANTNLQHYSGESGLSYLSQMLAIVFMM 140 Y IFR QG LPLNP+ I MEPTLAFNT ISFMA+TNLQHYSGE+GLSYLSQ++ I F+M Sbjct: 77 YFIFRLQGVLPLNPAHIEGMEPTLAFNTAISFMADTNLQHYSGENGLSYLSQLIGITFLM 136 Query: 141 FTSPATGLAVGIAIIRGLTGKPLGNFFVDMVRAITRIXXXXXXXXXXXXXXXXXXQTLEP 200 F +PAT LA+ +A IRGL GK LGNFF+D RA+TR+ QTL+ Sbjct: 137 FAAPATTLALVMAFIRGLAGKELGNFFIDFTRALTRVFLPIAFMAALVFVALGVPQTLDG 196 Query: 201 TALGHTLEGVTQEIARGPVASFLSIKELXXXXXXXXXVNSAHPFENPDAISNXXXXXXXX 260 T++G Q I RGPVASF++IKEL NS HPFENP +SN Sbjct: 197 AVTAQTIDGAKQSILRGPVASFVAIKELGNNGGGFFGANSTHPFENPGQMSNILQMMLMM 256 Query: 261 XXXXXXPFTYGKMVGNKKQGRVLFVSMAMMFIV-FLGISLASENAGNPAVNALGIQHQQG 319 PFTYG+MVGNKKQGR+LFVS+ M+F++ F+ I+ SE GNPA+NA+GI+H QG Sbjct: 257 LLPTALPFTYGRMVGNKKQGRILFVSLFMVFLLGFITIT-TSELNGNPALNAMGIEHVQG 315 Query: 320 SMEGKEARFGVAQSALYSVVTTASETGAVNTMHDTLTPIGGLITIGNMMLNTXXXXXXXX 379 S EGKE RFG S+LY+ VTTA+ETGAVNTMHDTLTPIGGL+ + NMMLNT Sbjct: 316 STEGKEVRFGTVFSSLYATVTTAAETGAVNTMHDTLTPIGGLVPLVNMMLNTVYGGVGAG 375 Query: 380 XXNVLMYTMIAVFLSGLMVGRTPEFLGKKIEGKEMKLIAVTLIINPMXXXXXXXXXXXXQ 439 N++MY +IAVF+SGLMVGRTPEFLGKKIEGKEMKLIAVT++ +P+ Sbjct: 376 FVNIIMYAIIAVFISGLMVGRTPEFLGKKIEGKEMKLIAVTILFHPLLILGFSALALSTS 435 Query: 440 --SDTLSNPGFHGLTQALYEFTSSAANNGSGFEGLGDATPFWNISTGIVMFLGRYFSIIA 497 +D +S+ GFHGLTQ +YE+TSSAANNGSGFEGLGD TPFWNI+TG+VMFLGRYFS+I Sbjct: 436 LGTDAISHSGFHGLTQVVYEYTSSAANNGSGFEGLGDNTPFWNITTGLVMFLGRYFSLIT 495 Query: 498 MLAVAGSLAAKKTVPETSGTFRTDKALFGAVFLGTVLIVGALTFFPALALGPIAEFLTLK 557 MLAVA SL K VPET GTFRTD LFG +F+GT++IVGALTFFP L LGPIAEFLTLK Sbjct: 496 MLAVAASLKEKTVVPETVGTFRTDNGLFGGIFIGTIVIVGALTFFPMLVLGPIAEFLTLK 555 >ref|NP_977133.1| potassium-transporting ATPase, A subunit [Bacillus cereus ATCC 10987] gb|AAS39741.1| potassium-transporting ATPase, A subunit [Bacillus cereus ATCC 10987] Length = 555 Score = 630 bits (1625), Expect = e-179, Method: Compositional matrix adjust. Identities = 317/540 (58%), Positives = 386/540 (71%), Gaps = 5/540 (0%) Query: 21 RPAGLYMAQVFNYERTGLDRWFGWLEKPVYAIGGIRKENYNWKQYALAAVLSNAMMMLLV 80 +P G+Y+ + F + LD+ FG EK ++ I G+++ N WKQYAL+ VL N M+++V Sbjct: 18 KPTGIYLEKAFQGSKK-LDKVFGPFEKLIFKITGVKEYNQTWKQYALSLVLLNGFMIVVV 76 Query: 81 YLIFRFQGALPLNPSGIASMEPTLAFNTVISFMANTNLQHYSGESGLSYLSQMLAIVFMM 140 Y +FR QG LPLNP+ I MEPTLAFNT ISFMA+TNLQHYSGE+GLSYLSQ++ I F+M Sbjct: 77 YFVFRLQGVLPLNPANIKGMEPTLAFNTAISFMADTNLQHYSGENGLSYLSQLIGITFLM 136 Query: 141 FTSPATGLAVGIAIIRGLTGKPLGNFFVDMVRAITRIXXXXXXXXXXXXXXXXXXQTLEP 200 F +PAT LA+ +A IRGL GK LGNFFVD RA+TR+ QTL+ Sbjct: 137 FAAPATTLALVMAFIRGLAGKELGNFFVDFTRALTRVFLPIAFMAALVFVALGVPQTLDG 196 Query: 201 TALGHTLEGVTQEIARGPVASFLSIKELXXXXXXXXXVNSAHPFENPDAISNXXXXXXXX 260 T++G Q I RGPVASF+SIKEL NS HPFENP +SN Sbjct: 197 VVTAQTIDGAKQSILRGPVASFVSIKELGNNGGGFFGANSTHPFENPGQMSNILQMMLMM 256 Query: 261 XXXXXXPFTYGKMVGNKKQGRVLFVSMAMMFIV-FLGISLASENAGNPAVNALGIQHQQG 319 PFTYG+MVGNKKQGR+LFVS+ M+F++ F+ I+ SE GNP +N +GI+H QG Sbjct: 257 LLPTALPFTYGRMVGNKKQGRILFVSLFMVFLLGFITIT-TSELNGNPVLNGMGIEHVQG 315 Query: 320 SMEGKEARFGVAQSALYSVVTTASETGAVNTMHDTLTPIGGLITIGNMMLNTXXXXXXXX 379 S EGKE RFG S+LY+ VTTA+ETGAVNTMHDTLTPIGGL+ + NMMLNT Sbjct: 316 STEGKEVRFGTVFSSLYATVTTAAETGAVNTMHDTLTPIGGLVPLVNMMLNTVYGGVGAG 375 Query: 380 XXNVLMYTMIAVFLSGLMVGRTPEFLGKKIEGKEMKLIAVTLIINPMXXXXXXXXXXXXQ 439 N++MY +IAVF+SGLMVGRTPEFLGKKIEGKEMKLIAVT++ +P+ Sbjct: 376 FVNIIMYAIIAVFISGLMVGRTPEFLGKKIEGKEMKLIAVTILFHPLLILGFSALALSTH 435 Query: 440 --SDTLSNPGFHGLTQALYEFTSSAANNGSGFEGLGDATPFWNISTGIVMFLGRYFSIIA 497 ++ +SN GFHGLTQ +YE+TSSAANNGSGFEGL D TPFWNI+TG+VMFLGRYFS+I Sbjct: 436 LGTEAISNSGFHGLTQVVYEYTSSAANNGSGFEGLADNTPFWNITTGLVMFLGRYFSLIT 495 Query: 498 MLAVAGSLAAKKTVPETSGTFRTDKALFGAVFLGTVLIVGALTFFPALALGPIAEFLTLK 557 MLAVA SL K VPET GTFRTD +LFG +F+GT++IVGALTFFP L LGPIAEFLTLK Sbjct: 496 MLAVAASLKEKTVVPETVGTFRTDNSLFGGIFIGTIVIVGALTFFPMLVLGPIAEFLTLK 555 >ref|NP_350263.1| K+-transporting ATPase, a chain [Clostridium acetobutylicum] sp|O32327|ATKA_CLOAB Potassium-transporting ATPase A chain (Potassium-translocating ATPase A chain) (ATP phosphohydrolase [potassium-transporting] A chain) (Potassium binding and translocating subunit A) pir||H97351 K+-transporting ATPase, a chain CAC3682 [imported] - Clostridium acetobutylicum gb|AAK81603.1| K+-transporting ATPase, a chain [Clostridium acetobutylicum] Length = 557 Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust. Identities = 255/539 (47%), Positives = 337/539 (62%), Gaps = 4/539 (0%) Query: 22 PAGLYMAQVFNYERTGLDRWFGWLEKPVYAIGGIRKEN-YNWKQYALAAVLSNAMMMLLV 80 P G YM +V +++T LD ++ +Y + GI+KE NWKQY A ++ NA+ ++ Sbjct: 19 PIGRYMYKVSEHKKTLLDPVLDKIDGFIYKLSGIQKEEEMNWKQYIFALLMCNAVPAIIG 78 Query: 81 YLIFRFQGALPLNPSGIASMEPTLAFNTVISFMANTNLQHYSGESGLSYLSQMLAIVFMM 140 Y+I R Q NP+ + ME L FNT+ISF+ NTNLQ Y+GE+G SYLSQM+ I F M Sbjct: 79 YIILRIQAVGIFNPNHVKGMEQGLTFNTIISFLTNTNLQDYAGETGASYLSQMIVITFFM 138 Query: 141 FTSPATGLAVGIAIIRGLTGKP-LGNFFVDMVRAITRIXXXXXXXXXXXXXXXXXXQTLE 199 F + ATG+AV +A IR L+GK LGNF+VD+VR TRI QTL Sbjct: 139 FFAAATGIAVALAFIRALSGKKKLGNFYVDLVRITTRILLPLSIIVAIFYIGQGVPQTLS 198 Query: 200 PTALGHTLEGVTQEIARGPVASFLSIKELXXXXXXXXXVNSAHPFENPDAISNXXXXXXX 259 T+EG Q I GPVAS +IK + NS+HPFENP ++N Sbjct: 199 ANKTVTTIEGKLQNIPLGPVASLEAIKLIGTNGGGFFSANSSHPFENPTPLTNSVQIITL 258 Query: 260 XXXXXXXPFTYGKMVGNKKQGRVLFVSMAMMFIVFLGISLASENAGNPAVNALGIQHQQG 319 +G M+ KKQ +F +M ++ + I ++E AGNPA++ +G+ G Sbjct: 259 LLLAGSMVVCFGHMIKKKKQAVAIFAAMMVLLLAGAAICFSAEKAGNPALSRIGLSQSMG 318 Query: 320 SMEGKEARFGVAQSALYSVVTTASETGAVNTMHDTLTPIGGLITIGNMMLNTXXXXXXXX 379 ++EGKE RFG+A S+L++ VTT + GAVN MHD+LTPIGG + + NMMLN Sbjct: 319 NLEGKEERFGIAGSSLFTTVTTDTSCGAVNNMHDSLTPIGGAVPLINMMLNVIFGGVGVG 378 Query: 380 XXNVLMYTMIAVFLSGLMVGRTPEFLGKKIEGKEMKLIAVTLIINPMXXXXXXXXXXXXQ 439 N++MY ++ VFL GLMVGRTPEFL KKIEGKE+KL+A +I++P + Sbjct: 379 FMNMIMYAILTVFLCGLMVGRTPEFLNKKIEGKEIKLVAFAIIVHPFLILMSSALALTTK 438 Query: 440 SDT--LSNPGFHGLTQALYEFTSSAANNGSGFEGLGDATPFWNISTGIVMFLGRYFSIIA 497 +SNPGFHGLTQ LY+FTSSAANNGSGFEGL D T FWN+S G+VMFLGRY SII Sbjct: 439 QGLAGISNPGFHGLTQVLYQFTSSAANNGSGFEGLIDNTMFWNVSAGVVMFLGRYLSIII 498 Query: 498 MLAVAGSLAAKKTVPETSGTFRTDKALFGAVFLGTVLIVGALTFFPALALGPIAEFLTL 556 +LAVA S AAK+ VP T GTF+TD +F + ++I+GALTF PA+ALGPI+E+LTL Sbjct: 499 LLAVASSFAAKRAVPATQGTFKTDNTIFTVTLIVIIVIIGALTFLPAVALGPISEYLTL 557 >ref|NP_569205.1| pli0052 [Listeria innocua] emb|CAC42050.1| pli0052 [Listeria innocua] Length = 573 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 251/555 (45%), Positives = 336/555 (60%), Gaps = 20/555 (3%) Query: 22 PAGLYMAQVFNYERTGLDRWFGWLEKPVYAIGGIRKENYNWKQYALAAVLSNAMMMLLVY 81 P G Y+ + + T D+ ++ +Y + GI + WK+Y L+ +L+NA+M+L+ Y Sbjct: 17 PMGKYLYHIATEQHTFADKLLDPVDNFIYKLCGIDNKEMGWKKYTLSMLLTNAVMVLVGY 76 Query: 82 LIFRFQGALPLNPSGIASMEPTLAFNTVISFMANTNLQHYSGESGLSYLSQMLAIVFMMF 141 I R Q LNP+ IA MEP+LAFNT+ISFM NTNLQHY+GESGLSYLSQ+L I FMMF Sbjct: 77 FILRIQSLPILNPNHIAGMEPSLAFNTIISFMTNTNLQHYAGESGLSYLSQLLVITFMMF 136 Query: 142 TSPATGLAVGIAIIRGLTG--KPLGNFFVDMVRAITRIXXXXXXXXXXXXXXXXXXQTLE 199 TS ATG +V +A IRGL G K +GNF+ D++R ITR+ Q L Sbjct: 137 TSAATGFSVAMAFIRGLAGKNKTMGNFYRDLIRIITRVLLPLSLIGGLLLISQGVPQNLL 196 Query: 200 PTALGHTLEGVTQEIARGPVASFLSIKELXXXXXXXXXVNSAHPFENPDAISNXXXXXXX 259 T+EG Q+IA GPVAS IK L NS PFENP+ ISN Sbjct: 197 SNITVQTIEGKFQDIAMGPVASLEIIKHLGTNGGGFFGANSTTPFENPNIISNMIEMLSM 256 Query: 260 XXXXXXXPFTYGKMVGNK----------------KQGRVLFVSMAMMFIVFLGISLASEN 303 +G MV ++ + + L M ++F++ L + + +E Sbjct: 257 ILLPASVVIAFGYMVRDRKKRVSKSKKQNLFWIGNEAKPLLSVMIILFLMGLIVCVIAEK 316 Query: 304 AGNPAVNALGIQHQQGSMEGKEARFGVAQSALYSVVTTASETGAVNTMHDTLTPIGGLIT 363 GNP + +G+ G+MEGKE RFG+ QSAL++ VTTA TG+VN MHD+L+P+GG++ Sbjct: 317 GGNPLLEKVGLSQAMGNMEGKELRFGIDQSALFTSVTTAFTTGSVNNMHDSLSPLGGMVA 376 Query: 364 IGNMMLNTXXXXXXXXXXNVLMYTMIAVFLSGLMVGRTPEFLGKKIEGKEMKLIAVTLII 423 + NMMLN N+++Y ++ VF+ GLM+G+TPE+LGKK+EGKEMKL A+ +II Sbjct: 377 LFNMMLNLVFGGKGVGVMNIILYVIMTVFICGLMIGKTPEYLGKKVEGKEMKLAALGIII 436 Query: 424 NPMXXXXXXXXXXXXQS--DTLSNPGFHGLTQALYEFTSSAANNGSGFEGLGDATPFWNI 481 +P + +SNPG+HGLTQ LYEFTSS+ANNGSGFEGL D + FWNI Sbjct: 437 HPFLILSFTAIAVSCTAGLSGISNPGYHGLTQILYEFTSSSANNGSGFEGLADNSHFWNI 496 Query: 482 STGIVMFLGRYFSIIAMLAVAGSLAAKKTVPETSGTFRTDKALFGAVFLGTVLIVGALTF 541 +TG+VMF GRY +II LA+AGSL K V E+ GT RTD F ++++ ALTF Sbjct: 497 TTGLVMFFGRYLTIIIQLAIAGSLLIKSQVNESIGTLRTDTKTFSMSLFMIIMLIAALTF 556 Query: 542 FPALALGPIAEFLTL 556 FPAL LGPIAE L+L Sbjct: 557 FPALILGPIAEHLSL 571 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.322 0.137 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 644,638,847 Number of extensions: 22750669 Number of successful extensions: 56421 Number of sequences better than 1.0e-05: 100 Number of HSP's gapped: 55939 Number of HSP's successfully gapped: 111 Length of query: 558 Length of database: 757,237,578 Length adjustment: 131 Effective length of query: 427 Effective length of database: 401,559,609 Effective search space: 171465953043 Effective search space used: 171465953043 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)