BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0149.0024.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_832302.1| ABC transporter ATP-binding protein [Bacillus c... 355 4e-97 ref|NP_656473.1| ABC_tran, ABC transporter [Bacillus anthracis A... 354 1e-96 ref|NP_978927.1| ABC transporter, ATP-binding protein [Bacillus ... 352 7e-96 ref|NP_783753.1| ABC transporter ATP-binding protein [Clostridiu... 327 2e-88 ref|NP_391843.1| similar to ABC transporter (ATP-binding protein... 323 3e-87 >ref|NP_832302.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579] gb|AAP09503.1| ABC transporter ATP-binding protein [Bacillus cereus ATCC 14579] Length = 256 Score = 355 bits (912), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 160/254 (62%), Positives = 212/254 (83%) Query: 1 MLEVRQVSKIYEGNVAYRALTDIDLTIEAGEFVGIMGPSGSGKTTLLNMIATVDSPTTGS 60 +L + +SK+Y+G + Y+AL DIDL+I+ GEFVGIMGPSGSGKTTLLNM++T+DSP++G Sbjct: 3 ILHAKSISKVYKGKIPYKALVDIDLSIQEGEFVGIMGPSGSGKTTLLNMVSTIDSPSSGE 62 Query: 61 IMIDGKDTGKLDKNELAVFRRRELGFVFQDFNLLNTLTVEENMVLPLTLDGTRVSEMKQK 120 I+I+G + +L +LA+FRR++LGFVFQ FNLL+TLTV+EN+VLP+TLDG V EM ++ Sbjct: 63 ILINGTNPFQLSSEDLALFRRKQLGFVFQSFNLLSTLTVKENIVLPMTLDGVSVREMNKR 122 Query: 121 AQEIAGKLGISAIMKKRTYEISGGQAQRTAIARAMIHSPKLLLADEPTGNLDSKAAKDVM 180 +EIA KL I+ I+ KRT+EISGGQAQRTAIARA++H P+LLLADEPTGNLDSK++ DVM Sbjct: 123 VEEIAEKLNITDILSKRTFEISGGQAQRTAIARAIVHKPQLLLADEPTGNLDSKSSNDVM 182 Query: 181 DLLEAINREQSTTMLLVTHDAVAASYCHRVVFIKDGRFYTEIHSGNNRQSFFQKIIDTLS 240 ++L+ +N+E+ TM+LVTHD AAS+C RVVFIKDG+ Y EI+ G +RQ+F+QKI+D LS Sbjct: 183 EMLDTLNKEEKATMMLVTHDPYAASFCSRVVFIKDGQLYNEIYCGESRQAFYQKIMDVLS 242 Query: 241 LLGGYSNDVPPVRI 254 LLGG +D VRI Sbjct: 243 LLGGKRHDFSSVRI 256 >ref|NP_656473.1| ABC_tran, ABC transporter [Bacillus anthracis A2012] ref|NP_844966.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. Ames] gb|AAP26452.1| ABC transporter, ATP-binding protein [Bacillus anthracis str. Ames] Length = 256 Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 160/254 (62%), Positives = 211/254 (83%) Query: 1 MLEVRQVSKIYEGNVAYRALTDIDLTIEAGEFVGIMGPSGSGKTTLLNMIATVDSPTTGS 60 +L + +SK+Y+G V Y+AL DIDL+I+ GEFVGIMGPSGSGKTTLLNM++T+DSP++G Sbjct: 3 ILHAKSISKVYKGKVPYKALVDIDLSIQEGEFVGIMGPSGSGKTTLLNMVSTIDSPSSGE 62 Query: 61 IMIDGKDTGKLDKNELAVFRRRELGFVFQDFNLLNTLTVEENMVLPLTLDGTRVSEMKQK 120 I+I+G + +L +LA+FRR++LGFVFQ FNLL+TLTV+EN+VLP+TLDG V EM ++ Sbjct: 63 ILINGTNPFQLSSEDLALFRRKQLGFVFQSFNLLSTLTVKENIVLPMTLDGVSVQEMNKR 122 Query: 121 AQEIAGKLGISAIMKKRTYEISGGQAQRTAIARAMIHSPKLLLADEPTGNLDSKAAKDVM 180 + IA KL I+ I+ KRT+EISGGQAQRTAIARA++H P+LLLADEPTGNLDSK++ DVM Sbjct: 123 VEAIAEKLNITDILSKRTFEISGGQAQRTAIARAIVHKPQLLLADEPTGNLDSKSSNDVM 182 Query: 181 DLLEAINREQSTTMLLVTHDAVAASYCHRVVFIKDGRFYTEIHSGNNRQSFFQKIIDTLS 240 ++L+ +N+E+ TM+LVTHD AAS+C RVVFIKDG+ Y EI+ G +RQ+F+QKI+D LS Sbjct: 183 EMLDTLNKEEKATMMLVTHDPYAASFCSRVVFIKDGQLYNEIYCGESRQAFYQKIMDVLS 242 Query: 241 LLGGYSNDVPPVRI 254 LLGG +D VRI Sbjct: 243 LLGGKRHDFSSVRI 256 >ref|NP_978927.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987] gb|AAS41535.1| ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987] Length = 256 Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 157/254 (61%), Positives = 211/254 (83%) Query: 1 MLEVRQVSKIYEGNVAYRALTDIDLTIEAGEFVGIMGPSGSGKTTLLNMIATVDSPTTGS 60 +L + +SK+Y+G + ++AL DIDL+I+ GEF+GIMGPSGSGKTTLLNM++T+DSPT+G Sbjct: 3 ILHAKNISKVYKGKIPFKALVDIDLSIQEGEFIGIMGPSGSGKTTLLNMVSTIDSPTSGE 62 Query: 61 IMIDGKDTGKLDKNELAVFRRRELGFVFQDFNLLNTLTVEENMVLPLTLDGTRVSEMKQK 120 I+I+G + +L +LA+FRR++LGFVFQ FNLL+TLTV+EN+VLP+TLDG V EM ++ Sbjct: 63 IVINGTNPFQLSSEDLALFRRKQLGFVFQSFNLLSTLTVKENIVLPMTLDGVSVQEMNKR 122 Query: 121 AQEIAGKLGISAIMKKRTYEISGGQAQRTAIARAMIHSPKLLLADEPTGNLDSKAAKDVM 180 +EIA KL I+ I+ KRT+EISGGQAQRTAIARA++H P+LLL DEPTGNLDSK++ DVM Sbjct: 123 VEEIAEKLNITDILNKRTFEISGGQAQRTAIARAIVHKPQLLLVDEPTGNLDSKSSNDVM 182 Query: 181 DLLEAINREQSTTMLLVTHDAVAASYCHRVVFIKDGRFYTEIHSGNNRQSFFQKIIDTLS 240 ++L+ +N+E+ TM+LVTHD AAS+C RV+FIKDG+ Y EI+ G +RQ+F+QKI+D LS Sbjct: 183 EMLDTLNKEEKATMMLVTHDPYAASFCSRVIFIKDGQLYNEIYRGESRQTFYQKIMDVLS 242 Query: 241 LLGGYSNDVPPVRI 254 LLGG +D VRI Sbjct: 243 LLGGKRHDFSSVRI 256 >ref|NP_783753.1| ABC transporter ATP-binding protein [Clostridium tetani] gb|AAO37420.1| ABC transporter ATP-binding protein [Clostridium tetani] Length = 252 Score = 327 bits (837), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 153/249 (61%), Positives = 196/249 (78%) Query: 1 MLEVRQVSKIYEGNVAYRALTDIDLTIEAGEFVGIMGPSGSGKTTLLNMIATVDSPTTGS 60 +LEV+ + KIY G V Y AL ++ +E GEFV IMGPSGSGKTTLLN ++T+DSPT G Sbjct: 3 ILEVKDIEKIYSGKVNYTALNGVNFELEKGEFVAIMGPSGSGKTTLLNCVSTIDSPTRGE 62 Query: 61 IMIDGKDTGKLDKNELAVFRRRELGFVFQDFNLLNTLTVEENMVLPLTLDGTRVSEMKQK 120 I+I+ K +LD + LA FRR+ELGFVFQDFNL+NTLTVEEN++LPLTLD MK + Sbjct: 63 IIINNKRPHELDDDNLAKFRRQELGFVFQDFNLVNTLTVEENIILPLTLDSVSRRVMKDR 122 Query: 121 AQEIAGKLGISAIMKKRTYEISGGQAQRTAIARAMIHSPKLLLADEPTGNLDSKAAKDVM 180 + + LGI ++KKRT+EISGGQAQR AIAR++IH P LLLADEPTGNLDSKA KDVM Sbjct: 123 LKISSNLLGIEKLLKKRTFEISGGQAQRVAIARSIIHEPSLLLADEPTGNLDSKAVKDVM 182 Query: 181 DLLEAINREQSTTMLLVTHDAVAASYCHRVVFIKDGRFYTEIHSGNNRQSFFQKIIDTLS 240 +L +IN++ +TT+L+VTHDA AS+C+RV+FIKDG+ Y EIHSG+++ F++KIID LS Sbjct: 183 ELFVSINKKLNTTILMVTHDAYVASFCNRVIFIKDGKLYNEIHSGDSQSEFYEKIIDMLS 242 Query: 241 LLGGYSNDV 249 LGG +D+ Sbjct: 243 FLGGGRSDI 251 >ref|NP_391843.1| similar to ABC transporter (ATP-binding protein) [Bacillus subtilis] sp|P42423|YXDL_BACSU Hypothetical ABC transporter ATP-binding protein yxdL pir||A70074 ABC transporter (ATP-binding protein) homolog yxdL - Bacillus subtilis dbj|BAA03302.1| hypothetical protein [Bacillus subtilis] dbj|BAA08315.1| homologous to FtsE protein of E. coli, belonging to the ATP-binding-cassette (ABC) family [Bacillus subtilis] emb|CAB16000.1| yxdL [Bacillus subtilis subsp. subtilis str. 168] Length = 257 Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 148/254 (58%), Positives = 200/254 (78%) Query: 1 MLEVRQVSKIYEGNVAYRALTDIDLTIEAGEFVGIMGPSGSGKTTLLNMIATVDSPTTGS 60 MLEV+ ++K Y+G V+Y+AL I +IE GEF +MGPSGSGKTTLLN+I+T+D P +G Sbjct: 4 MLEVKHINKTYKGQVSYQALKQISFSIEEGEFTAVMGPSGSGKTTLLNIISTIDRPDSGD 63 Query: 61 IMIDGKDTGKLDKNELAVFRRRELGFVFQDFNLLNTLTVEENMVLPLTLDGTRVSEMKQK 120 I+I+G++ +L + +LA FRR++LGFVFQDFNLL+TLT+ EN++LPLTL+ S M++K Sbjct: 64 ILINGENPHRLKRTKLAHFRRKQLGFVFQDFNLLDTLTIGENIMLPLTLEKEAPSVMEEK 123 Query: 121 AQEIAGKLGISAIMKKRTYEISGGQAQRTAIARAMIHSPKLLLADEPTGNLDSKAAKDVM 180 IA KLGI ++ KRT+E+SGGQ QR AIARA+IH P L+LADEPTGNLDSKA KDVM Sbjct: 124 LHGIAAKLGIENLLNKRTFEVSGGQRQRAAIARAVIHKPSLILADEPTGNLDSKATKDVM 183 Query: 181 DLLEAINREQSTTMLLVTHDAVAASYCHRVVFIKDGRFYTEIHSGNNRQSFFQKIIDTLS 240 + L+++NR+ T L+VTHD V+ASYC RV+FIKD + EI+ G NRQ F+++I+D LS Sbjct: 184 ETLQSLNRDDHVTALMVTHDPVSASYCRRVIFIKDVVLFNEIYRGENRQVFYEQILDVLS 243 Query: 241 LLGGYSNDVPPVRI 254 +LGG +ND+ VR+ Sbjct: 244 MLGGNANDLSSVRL 257 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.135 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 347,287,187 Number of extensions: 13494758 Number of successful extensions: 116107 Number of sequences better than 1.0e-05: 22032 Number of HSP's gapped: 93919 Number of HSP's successfully gapped: 23664 Length of query: 255 Length of database: 757,237,578 Length adjustment: 123 Effective length of query: 132 Effective length of database: 423,280,401 Effective search space: 55873012932 Effective search space used: 55873012932 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 124 (52.4 bits)