BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0149.0005.p (693 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00165029.1| hypothetical protein Selo121801 [Synechococcu... 123 2e-26 ref|ZP_00072728.1| COG2385: Sporulation protein and related prot... 118 5e-25 ref|NP_622757.1| sporulation protein and related proteins [Therm... 110 1e-22 ref|NP_485645.1| similar to sporulation protein SpoIID [Nostoc s... 109 2e-22 ref|ZP_00160840.1| hypothetical protein Avar234301 [Anabaena var... 108 5e-22 >ref|ZP_00165029.1| hypothetical protein Selo121801 [Synechococcus elongatus PCC 7942] Length = 407 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/130 (52%), Positives = 87/130 (66%), Gaps = 8/130 (6%) Query: 294 RVYRGNLELSALSGSLAVINEVPLEQYLYAVVGGEVSSGWPEEALKAQAVAARSYALSQG 353 R YRG L+L G++ IN V LE YLY+VVG EV + WP EALKAQAVAARS+ L + Sbjct: 108 RWYRGRLQLILDQGAVTAINHVGLESYLYSVVGSEVYASWPTEALKAQAVAARSFVLYRR 167 Query: 354 N-----RFDVANVVDTTLSQVYYGIGAEAPTITKAVDATAGEVLMSGGKIVEAVFSSNSG 408 + RFDV N +T QVY GI +EAPT AV+ATAG+VL +++EAVF ++SG Sbjct: 168 DRNRDPRFDVGN---STTWQVYKGIASEAPTTIAAVNATAGQVLTYNNRVIEAVFHASSG 224 Query: 409 GVTADPSEVW 418 G T + +VW Sbjct: 225 GHTENVEDVW 234 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 24/45 (53%), Positives = 32/45 (71%) Query: 647 SGFYFIGWGNGHGLGMSQWGVKGMADKGYDYKRILQHYFNNVTIN 691 S F IG G GHGLG+SQWG G+A +G DY+RIL H++ N ++ Sbjct: 343 SQFTIIGRGYGHGLGLSQWGAYGLASQGVDYRRILSHFYQNTNLS 387 >ref|ZP_00072728.1| COG2385: Sporulation protein and related proteins [Trichodesmium erythraeum IMS101] Length = 388 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 62/129 (48%), Positives = 82/129 (63%), Gaps = 2/129 (1%) Query: 294 RVYRGNLELSALSGSLAVINEVPLEQYLYAVVGGEVSSGWPEEALKAQAVAARSYALS-- 351 R YRG + G + IN V E+YLY+V+G E++S WP+EALKAQAVAARSYAL Sbjct: 114 RWYRGRTHIIPHKGGITAINYVNFEEYLYSVIGAEMNSNWPQEALKAQAVAARSYALKKR 173 Query: 352 QGNRFDVANVVDTTLSQVYYGIGAEAPTITKAVDATAGEVLMSGGKIVEAVFSSNSGGVT 411 Q N + ++ D QVY GI E+P AVDAT G+VL G+I+ A+F S+SGG T Sbjct: 174 QENSNNFYDLGDNQFWQVYQGIKTESPGTYAAVDATQGQVLTYNGEIILALFHSSSGGHT 233 Query: 412 ADPSEVWGN 420 + ++W N Sbjct: 234 ENVEDIWSN 242 >ref|NP_622757.1| sporulation protein and related proteins [Thermoanaerobacter tengcongensis] gb|AAM24361.1| sporulation protein and related proteins [Thermoanaerobacter tengcongensis] Length = 780 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 87/145 (60%), Gaps = 5/145 (3%) Query: 278 IVSGNSAGIQLAERSKRVYRGNLEL----SALSGSLAVINEVPLEQYLYAVVGGEVSSGW 333 IV N G+ R Y G + +++ L +IN +P+E+YL VV E+S W Sbjct: 538 IVPTND-GVLFYVNKARPYEGEFRIYPNPNSIPSGLDLINVLPIEEYLRGVVPAEMSPSW 596 Query: 334 PEEALKAQAVAARSYALSQGNRFDVANVVDTTLSQVYYGIGAEAPTITKAVDATAGEVLM 393 PEEALKAQ +AAR+YAL + ++ +V DTTLSQVY GI P I + +++T GEV+ Sbjct: 597 PEEALKAQILAARTYALVRIKDENIFDVYDTTLSQVYKGISIADPKIDQLIESTKGEVVT 656 Query: 394 SGGKIVEAVFSSNSGGVTADPSEVW 418 GGK+ + V+S+++GG T D W Sbjct: 657 YGGKLADTVYSASAGGYTVDSFFAW 681 >ref|NP_485645.1| similar to sporulation protein SpoIID [Nostoc sp. PCC 7120] pir||AG2006 hypothetical protein alr1605 [imported] - Nostoc sp. (strain PCC 7120) dbj|BAB77971.1| ORF_ID:alr1605~similar to sporulation protein SpoIID [Nostoc sp. PCC 7120] Length = 384 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 83/243 (34%), Positives = 125/243 (51%), Gaps = 38/243 (15%) Query: 193 GFDAWKTLVSGSDGSAQVEVWVGEAANDSDLAALRTAVTAG-----LPQL-AVSAG-AAA 245 G W LV+ + S + V + N + + + TA+ L QL A+SA A A Sbjct: 25 GILLWIALVAPAQASVILRVAIERGVNQARVGSSTTAIVKDSTGRTLGQLPAMSAFYAQA 84 Query: 246 TPG--MMIRTDAGLDWSSESQAFHYQVSGTGAKFIVSGNSAGIQLAERSKRVYRGNLELS 303 PG + + +GL W + +G F+ G+ R +RG + Sbjct: 85 VPGGVALDKWQSGLFW----------IEPSGKGFVYIGD-----------RWFRGRTLVV 123 Query: 304 ALSGSLAVINEVPLEQYLYAVVGGEVSSGWPEEALKAQAVAARSYALSQGNR------FD 357 + V+N V LE+YLY+VVGGE++S WP EALKAQA+AAR+YAL + + +D Sbjct: 124 PTEKGIDVVNWVDLEEYLYSVVGGEMNSSWPGEALKAQAIAARTYALYKREQQRSNPVYD 183 Query: 358 VANVVDTTLSQVYYGIGAEAPTITKAVDATAGEVLMSGGKIVEAVFSSNSGGVTADPSEV 417 + + D Q+Y G+ +E+PT AVDATAG+VL ++ +VF + SGG T + +V Sbjct: 184 LGDTPDRW--QIYKGVSSESPTTYAAVDATAGQVLTYNNNLILSVFHACSGGHTENVEDV 241 Query: 418 WGN 420 W N Sbjct: 242 WSN 244 >ref|ZP_00160840.1| hypothetical protein Avar234301 [Anabaena variabilis ATCC 29413] Length = 381 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 123/244 (50%), Gaps = 40/244 (16%) Query: 193 GFDAWKTLVSGSDGSAQVEVWVGEAANDSDLAALRTAVTAG--------LPQLAVSAGAA 244 G W LV+ + S + V + N + + + TA+ LP ++ S A Sbjct: 22 GILLWIALVAPAQASVILRVAIERGVNQARVGSSTTAIVKDSTGRTLGQLPAMS-SFYAQ 80 Query: 245 ATPG--MMIRTDAGLDWSSESQAFHYQVSGTGAKFIVSGNSAGIQLAERSKRVYRGNLEL 302 A PG + + +GL W + +G F+ G+ R +RG + Sbjct: 81 AVPGGVALDKWQSGLFW----------IEPSGKGFVYIGD-----------RWFRGRTLV 119 Query: 303 SALSGSLAVINEVPLEQYLYAVVGGEVSSGWPEEALKAQAVAARSYALSQGNR------F 356 + V+N V LE+YLY+VVGGE++S WP EALKAQA+AAR+YAL + + + Sbjct: 120 VPTEKGIDVVNWVDLEEYLYSVVGGEMNSSWPGEALKAQAIAARTYALYKREQQRSNPVY 179 Query: 357 DVANVVDTTLSQVYYGIGAEAPTITKAVDATAGEVLMSGGKIVEAVFSSNSGGVTADPSE 416 D+ + D Q+Y G+ +E+P+ AVDATAG+VL ++ +VF + SGG T + + Sbjct: 180 DLGDTPDRW--QIYKGVSSESPSTYAAVDATAGQVLTYNNNLILSVFHACSGGHTENVED 237 Query: 417 VWGN 420 VW N Sbjct: 238 VWSN 241 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.312 0.128 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 900,792,248 Number of extensions: 34200349 Number of successful extensions: 76350 Number of sequences better than 1.0e-05: 106 Number of HSP's gapped: 76274 Number of HSP's successfully gapped: 112 Length of query: 693 Length of database: 757,237,578 Length adjustment: 133 Effective length of query: 560 Effective length of database: 396,129,411 Effective search space: 221832470160 Effective search space used: 221832470160 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 130 (54.7 bits)