BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0011.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_243657.1| mutants block sporulation after engulfment [Bac... 111 1e-23 ref|NP_833901.1| Stage III sporulation protein AG [Bacillus cere... 100 3e-20 ref|NP_980553.1| stage III sporulation protein AG [Bacillus cere... 100 4e-20 ref|NP_658224.1| hypothetical protein predicted by GeneMark [Bac... 99 5e-20 ref|NP_782193.1| stage III sporulation protein AG [Clostridium t... 98 1e-19 >ref|NP_243657.1| mutants block sporulation after engulfment [Bacillus halodurans] pir||G83998 mutants block sporulation after engulfment spoIIIAG [imported] - Bacillus halodurans (strain C-125) dbj|BAB06510.1| mutants block sporulation after engulfment [Bacillus halodurans] Length = 221 Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 53/124 (42%), Positives = 86/124 (69%) Query: 89 EDRTKEILEKIVGVGTVDIMVTVDSTEEIVVQRNMNDSQQQSEETDASGGKRHTTQYTRD 148 E++ KE LE+IVG+ V +M+ + TE +V ++N + QQ+++ETD GG R +RD Sbjct: 94 ENQLKESLEQIVGISDVTVMINLAETERMVYEKNSSTKQQKTDETDREGGTRKVDDVSRD 153 Query: 149 GEIVTYSQSGDETPIITKRIKPQVRGVLVVAKGAENKVVRGLIEEAVEKGLNVPDYRISV 208 E+V + E P++ ++ KPQVRGVL+VA+G EN ++G++ EAV + L+VP +R+SV Sbjct: 154 EEVVIVREGDQEKPLLVQKEKPQVRGVLIVAEGVENAQIKGMVVEAVSRVLDVPAHRVSV 213 Query: 209 VPRK 212 +P+K Sbjct: 214 MPKK 217 >ref|NP_833901.1| Stage III sporulation protein AG [Bacillus cereus ATCC 14579] gb|AAP11102.1| Stage III sporulation protein AG [Bacillus cereus ATCC 14579] Length = 220 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 86/141 (60%), Gaps = 1/141 (0%) Query: 71 QQGNEAAPNSFAGIEQALEDRTKEILEKIVGVGTVDIMVTVDSTEEIVVQRNMNDSQQQS 130 Q+ N+ N E+A E K LE+I GV V I V +DS+EE ++++N Q + Sbjct: 80 QKNNDNMSN-VEKYEKAYEQELKTALEEIAGVKDVTIKVNLDSSEEKILEKNTVKRSQTT 138 Query: 131 EETDASGGKRHTTQYTRDGEIVTYSQSGDETPIITKRIKPQVRGVLVVAKGAENKVVRGL 190 ETD +GGKR + D + V + ETP++ + KP+VRGVLVVAKG +N V+ + Sbjct: 139 GETDKTGGKREVEDESLDEKTVIIREGDKETPVVLRTEKPKVRGVLVVAKGVDNIQVKAM 198 Query: 191 IEEAVEKGLNVPDYRISVVPR 211 ++EAV + L+VP +R+SV P+ Sbjct: 199 VKEAVIRLLDVPAHRVSVSPK 219 >ref|NP_980553.1| stage III sporulation protein AG [Bacillus cereus ATCC 10987] gb|AAS43161.1| stage III sporulation protein AG [Bacillus cereus ATCC 10987] Length = 220 Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 86/141 (60%), Gaps = 1/141 (0%) Query: 71 QQGNEAAPNSFAGIEQALEDRTKEILEKIVGVGTVDIMVTVDSTEEIVVQRNMNDSQQQS 130 Q+ N+ N E+A E K LE+I GV V I V +DS+EE ++++N Q + Sbjct: 80 QKNNDNMSN-VEKYEKAYEQELKAALEEIAGVKDVTINVNLDSSEEKILEKNTVKRSQTT 138 Query: 131 EETDASGGKRHTTQYTRDGEIVTYSQSGDETPIITKRIKPQVRGVLVVAKGAENKVVRGL 190 ETD +GGKR + D + V + ETP++ + KP+VRGVLVVAKG +N V+ + Sbjct: 139 GETDKTGGKREVEDESLDEKTVIIREGDKETPVVLRTEKPKVRGVLVVAKGVDNIQVKAM 198 Query: 191 IEEAVEKGLNVPDYRISVVPR 211 ++EAV + L+VP +R+SV P+ Sbjct: 199 VKEAVIRLLDVPAHRVSVSPK 219 >ref|NP_658224.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_846639.1| stage III sporulation protein AG [Bacillus anthracis str. Ames] gb|AAP28125.1| stage III sporulation protein AG [Bacillus anthracis str. Ames] Length = 220 Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 57/141 (40%), Positives = 86/141 (60%), Gaps = 1/141 (0%) Query: 71 QQGNEAAPNSFAGIEQALEDRTKEILEKIVGVGTVDIMVTVDSTEEIVVQRNMNDSQQQS 130 Q+ N+ N E+A E K LE+I GV V I V +DS+EE ++++N Q + Sbjct: 80 QKNNDNMSN-VEKYEKAYEQELKAALEEIAGVKDVTINVNLDSSEEKILEKNTVKRSQTT 138 Query: 131 EETDASGGKRHTTQYTRDGEIVTYSQSGDETPIITKRIKPQVRGVLVVAKGAENKVVRGL 190 ETD +GGKR + D + V + ETP++ + KP+VRGVLVVAKG +N V+ + Sbjct: 139 GETDKTGGKRKVEDESLDEKTVIIREGDKETPVVLRTEKPKVRGVLVVAKGVDNIQVKAM 198 Query: 191 IEEAVEKGLNVPDYRISVVPR 211 ++EAV + L+VP +R+SV P+ Sbjct: 199 VKEAVIRLLDVPAHRVSVSPK 219 >ref|NP_782193.1| stage III sporulation protein AG [Clostridium tetani E88] gb|AAO36130.1| stage III sporulation protein AG [Clostridium tetani E88] Length = 210 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/129 (41%), Positives = 79/129 (61%) Query: 85 EQALEDRTKEILEKIVGVGTVDIMVTVDSTEEIVVQRNMNDSQQQSEETDASGGKRHTTQ 144 E+ L K+ILEK G+G VD+M+ EE V N+NDS +EETD GG+R TTQ Sbjct: 82 EKQLGIELKQILEKTEGIGNVDVMLYFSEGEEQVPAFNINDSTNSTEETDNEGGRRKTTQ 141 Query: 145 YTRDGEIVTYSQSGDETPIITKRIKPQVRGVLVVAKGAENKVVRGLIEEAVEKGLNVPDY 204 +VT ++ P+I K KP++ GVL+VA+GAENK+ I++AV N+P+ Sbjct: 142 KNNGNTVVTTNKGEKTEPLILKTKKPEITGVLIVAEGAENKLTEYRIKKAVINLFNIPEN 201 Query: 205 RISVVPRKQ 213 +++V P K+ Sbjct: 202 KVNVYPMKK 210 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.310 0.129 0.359 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 285,372,172 Number of extensions: 10498783 Number of successful extensions: 25174 Number of sequences better than 1.0e-05: 13 Number of HSP's gapped: 25171 Number of HSP's successfully gapped: 13 Length of query: 214 Length of database: 757,237,578 Length adjustment: 120 Effective length of query: 94 Effective length of database: 431,425,698 Effective search space: 40554015612 Effective search space used: 40554015612 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 123 (52.0 bits)