BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0007.p
         (67 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           2,715,099 sequences; 757,237,578 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_243661.1| mutants block sporulation after engulfment [Bac...    69   3e-11
ref|NP_390321.1| spoIIIAC [Bacillus subtilis] >gi|1710822|sp|P49...    62   5e-09
ref|NP_692813.1| stage III sporulation protein AC [Oceanobacillu...    59   3e-08
ref|NP_658228.1| hypothetical protein predicted by GeneMark [Bac...    56   3e-07

>ref|NP_243661.1| mutants block sporulation after engulfment [Bacillus halodurans]
 pir||C83999 mutants block sporulation after engulfment spoIIIAC [imported] -
          Bacillus halodurans (strain C-125)
 dbj|BAB06514.1| mutants block sporulation after engulfment [Bacillus halodurans]
          Length = 68

 Score = 69.3 bits (168), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 44/67 (65%)

Query: 1  MNIEVNXXXXXXXXXXXXXXXHTVLKQMGKEDIAHWVTIVGFIIVLFMVIRMLDGLLQEI 60
          M  +VN               HTVLKQMGKED AHWVT++GF++VL+MV  ++D L Q+I
Sbjct: 1  MAYDVNTIFQIAGIGIVVAMIHTVLKQMGKEDWAHWVTLIGFVVVLYMVATIVDDLFQKI 60

Query: 61 KTIFLFQ 67
          + +FLFQ
Sbjct: 61 RGVFLFQ 67


>ref|NP_390321.1| spoIIIAC [Bacillus subtilis]
 sp|P49780|S3AC_BACSU Stage III sporulation protein AC
 pir||F69711 mutants block sporulation after engulfment spoIIIAC - Bacillus
          subtilis
 gb|AAA76722.1| SpoIIIAC
 dbj|BAA12562.1| SpoIIIAC [Bacillus subtilis]
 emb|CAB14372.1| spoIIIAC [Bacillus subtilis subsp. subtilis str. 168]
          Length = 68

 Score = 61.6 bits (148), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 42/67 (62%)

Query: 1  MNIEVNXXXXXXXXXXXXXXXHTVLKQMGKEDIAHWVTIVGFIIVLFMVIRMLDGLLQEI 60
          M ++VN               HT+L QMGK++ A WVT++GFI +LFMV  ++D L ++I
Sbjct: 1  MGVDVNVIFQIAGVGIVVAFLHTILDQMGKKEYAQWVTLLGFIYILFMVATIVDDLFKKI 60

Query: 61 KTIFLFQ 67
          K +FLFQ
Sbjct: 61 KAVFLFQ 67


>ref|NP_692813.1| stage III sporulation protein AC [Oceanobacillus iheyensis
          HTE831]
 dbj|BAC13848.1| stage III sporulation protein AC (mutants block sporulation after
          engulfment) [Oceanobacillus iheyensis HTE831]
          Length = 66

 Score = 58.9 bits (141), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 37/45 (82%)

Query: 22 HTVLKQMGKEDIAHWVTIVGFIIVLFMVIRMLDGLLQEIKTIFLF 66
          HT+LKQMGKE+IA + T++GFIIVL +V+  L  L Q+IK++FLF
Sbjct: 22 HTILKQMGKEEIAQFATLIGFIIVLVIVVNGLSDLFQQIKSVFLF 66


>ref|NP_658228.1| hypothetical protein predicted by GeneMark [Bacillus anthracis
          A2012]
 ref|NP_833905.1| Stage III sporulation protein AC [Bacillus cereus ATCC 14579]
 ref|NP_846643.1| stage III sporulation protein AC [Bacillus anthracis str. Ames]
 ref|NP_980557.1| stage III sporulation protein AC [Bacillus cereus ATCC 10987]
 gb|AAP11106.1| Stage III sporulation protein AC [Bacillus cereus ATCC 14579]
 gb|AAP28129.1| stage III sporulation protein AC [Bacillus anthracis str. Ames]
 gb|AAS43165.1| stage III sporulation protein AC [Bacillus cereus ATCC 10987]
          Length = 67

 Score = 55.8 bits (133), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 43/67 (64%)

Query: 1  MNIEVNXXXXXXXXXXXXXXXHTVLKQMGKEDIAHWVTIVGFIIVLFMVIRMLDGLLQEI 60
          M+I+V                HTVLK++ +EDIA+WV +VGF+++LF V  +++ L  +I
Sbjct: 1  MSIDVGLIFQIAGIGIVLAFIHTVLKELKREDIANWVILVGFVVILFHVAFLINTLFDKI 60

Query: 61 KTIFLFQ 67
          K++FLFQ
Sbjct: 61 KSVFLFQ 67


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 24, 2004  1:53 AM
  Number of letters in database: 757,237,578
  Number of sequences in database:  2,715,099
  
Lambda     K      H
   0.335    0.148    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 2715099
Number of Hits to DB: 60,353,802
Number of extensions: 1339116
Number of successful extensions: 7788
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 7788
Number of HSP's successfully gapped: 4
Length of query: 67
Length of database: 757,237,578
Length adjustment: 38
Effective length of query: 29
Effective length of database: 654,063,816
Effective search space: 18967850664
Effective search space used: 18967850664
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 120 (50.8 bits)