BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0128.0012.p (926 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAA94528.1| unknown [environmental sequence] 96 4e-18 gb|EAA94529.1| unknown [environmental sequence] 78 8e-13 >gb|EAA94528.1| unknown [environmental sequence] Length = 278 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 10/271 (3%) Query: 51 VTAQDGVTKKSYSLFILRAPSDVADXXXXXXXXXXXXPVFNNDDTGYSVEVPNEVSSLEI 110 VTAQ+GV+ +Y++ + RA S+ A+ P F+ Y+ V N VS++ + Sbjct: 5 VTAQNGVSTTTYNVAVTRACSEDANLDGLVPSAGTLNPSFDASVVSYATTVGNSVSAMTL 64 Query: 111 TPKLLDAAAGLSVDGNVHIDDTAYTK-NLNVGM-NTVKIVVVSQSGVREKTTLVNIIRKA 168 TP + A ++V+G I A T L G NT+ IVV Q G+ KT + R Sbjct: 65 TPTVASDVASVTVEGLAVISGAASTAVALAEGASNTISIVVTPQCGMSNKTYEFVVTRDP 124 Query: 169 SSNADLSSLVLSDG------QLDPAYDKNQTRYAVTVDNQVSELAVTPTPEDVHATVSLN 222 S+ A ++ + + L P + T Y TV N V + VTPT A+ ++N Sbjct: 125 STVATMTDVAVDMAPWGWPVSLSPTFAAGTTSYTATVANWVPAVTVTPTATHASASSTVN 184 Query: 223 G-NVTPNAQPRWVDL-QVGVNEFNVLVQAEDGVTAKNYVLTIVRKASSDADLINITLSGK 280 G +V+ +DL + V++ A+DG T Y + R+ S ++ L + + Sbjct: 185 GVSVSSGTASSSIDLTENAATSIAVVITAQDGTTTGTYTFDVTRQPSYESTLSALVVDSG 244 Query: 281 PLSGGFDRTTSTYFEYVANNIDSMAVTATTS 311 LSG FD+ ++Y V N++ S+A+T TT+ Sbjct: 245 TLSGAFDQQATSYTLAVENSVSSLALTPTTT 275 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 71/220 (32%), Positives = 111/220 (50%), Gaps = 12/220 (5%) Query: 3 VANAVTAAEFTPT-AAEGASIKVNGVDHPSGTPFFITNLAAG-NNKYLIEVTAQDGVTKK 60 V N+V+A TPT A++ AS+ V G+ SG LA G +N I VT Q G++ K Sbjct: 55 VGNSVSAMTLTPTVASDVASVTVEGLAVISGAASTAVALAEGASNTISIVVTPQCGMSNK 114 Query: 61 SYSLFILRAPS------DVADXXXXXXXXXXXXPVFNNDDTGYSVEVPNEVSSLEITPKL 114 +Y + R PS DVA P F T Y+ V N V ++ +TP Sbjct: 115 TYEFVVTRDPSTVATMTDVAVDMAPWGWPVSLSPTFAAGTTSYTATVANWVPAVTVTPTA 174 Query: 115 LDAAAGLSVDGNVHIDDTAYTKNLNVGMN---TVKIVVVSQSGVREKTTLVNIIRKASSN 171 A+A +V+G V + + ++++ N ++ +V+ +Q G T ++ R+ S Sbjct: 175 THASASSTVNG-VSVSSGTASSSIDLTENAATSIAVVITAQDGTTTGTYTFDVTRQPSYE 233 Query: 172 ADLSSLVLSDGQLDPAYDKNQTRYAVTVDNQVSELAVTPT 211 + LS+LV+ G L A+D+ T Y + V+N VS LA+TPT Sbjct: 234 STLSALVVDSGTLSGAFDQQATSYTLAVENSVSSLALTPT 273 Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 77/239 (32%), Positives = 120/239 (50%), Gaps = 12/239 (5%) Query: 145 VKIVVVSQSGVREKTTLVNIIRKASSNADLSSLVLSDGQLDPAYDKNQTRYAVTVDNQVS 204 + +VV +Q+GV T V + R S +A+L LV S G L+P++D + YA TV N VS Sbjct: 1 MTLVVTAQNGVSTTTYNVAVTRACSEDANLDGLVPSAGTLNPSFDASVVSYATTVGNSVS 60 Query: 205 ELAVTPTPEDVHATVSLNG-NVTPNAQPRWVDLQVGV-NEFNVLVQAEDGVTAKNYVLTI 262 + +TPT A+V++ G V A V L G N +++V + G++ K Y + Sbjct: 61 AMTLTPTVASDVASVTVEGLAVISGAASTAVALAEGASNTISIVVTPQCGMSNKTYEFVV 120 Query: 263 VRKASSDADLINITLSGKP------LSGGFDRTTSTYFEYVANNIDSMAVTATTSDEQAT 316 R S+ A + ++ + P LS F T++Y VAN + ++ VT T + A+ Sbjct: 121 TRDPSTVATMTDVAVDMAPWGWPVSLSPTFAAGTTSYTATVANWVPAVTVTPTATHASAS 180 Query: 317 YTINGV-QSAGGVPVPLAVGENVVT---IAVTAADKVTTKEYTVTIVRAASSNANLLEL 371 T+NGV S+G + + EN T + +TA D TT YT + R S + L L Sbjct: 181 STVNGVSVSSGTASSSIDLTENAATSIAVVITAQDGTTTGTYTFDVTRQPSYESTLSAL 239 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 77/269 (28%), Positives = 115/269 (42%), Gaps = 8/269 (2%) Query: 444 VTAQDG-SMKVYTINLVRNPSTDAALLEMRITPGELTPGFQPGIXXXXXXXXXXXXXXXX 502 VTAQ+G S Y + + R S DA L + + G L P F + Sbjct: 5 VTAQNGVSTTTYNVAVTRACSEDANLDGLVPSAGTLNPSFDASVVSYATTVGNSVSAMTL 64 Query: 503 XIVTNHEAATYVLKKNGASTGVTGNTVALDEG-TNQITVQVTAADASTQMTYTVTVNRAI 561 + A+ ++ +G VAL EG +N I++ VT + TY V R Sbjct: 65 TPTVASDVASVTVEGLAVISGAASTAVALAEGASNTISIVVTPQCGMSNKTYEFVVTRDP 124 Query: 562 LPKXXXXXXXXXXXXXGTEI-LNPEFSAEIFKYSLSVPYEVSQVELDALKGDINARLTVN 620 G + L+P F+A Y+ +V V V + +A TVN Sbjct: 125 STVATMTDVAVDMAPWGWPVSLSPTFAAGTTSYTATVANWVPAVTVTPTATHASASSTVN 184 Query: 621 GVTVDNPML---VKLAEGLNT-VNLKVTAQDGKTESVYEVEITRKSRSSNADLNNISVIA 676 GV+V + + L E T + + +TAQDG T Y ++TR+ S + L+ + V + Sbjct: 185 GVSVSSGTASSSIDLTENAATSIAVVITAQDGTTTGTYTFDVTRQ-PSYESTLSALVVDS 243 Query: 677 GALDPAFDPAVSEYTVEVENDVDSIALNP 705 G L AFD + YT+ VEN V S+AL P Sbjct: 244 GTLSGAFDQQATSYTLAVENSVSSLALTP 272 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 67/234 (28%), Positives = 100/234 (42%), Gaps = 23/234 (9%) Query: 538 ITVQVTAADASTQMTYTVTVNRAILPKXXXXXXXXXXXXXGTEILNPEFSAEIFKYSLSV 597 +T+ VTA + + TY V V RA GT LNP F A + Y+ +V Sbjct: 1 MTLVVTAQNGVSTTTYNVAVTRAC---SEDANLDGLVPSAGT--LNPSFDASVVSYATTV 55 Query: 598 PYEVSQVELDALKGDINARLTVNGVTVDN---PMLVKLAEGL-NTVNLKVTAQDGKTESV 653 VS + L A +TV G+ V + V LAEG NT+++ VT Q G + Sbjct: 56 GNSVSAMTLTPTVASDVASVTVEGLAVISGAASTAVALAEGASNTISIVVTPQCGMSNKT 115 Query: 654 YEVEITRKSRSSNADLNNISVIAG------ALDPAFDPAVSEYTVEVENDVDSIALNPVV 707 YE +TR S+ A + +++V +L P F + YT V N V ++ + P Sbjct: 116 YEFVVTRD-PSTVATMTDVAVDMAPWGWPVSLSPTFAAGTTSYTATVANWVPAVTVTPTA 174 Query: 708 ADTKAGSQIIGRDGASLNHLVEGD------NVFDILVTAEDGTVK-IYTVKVIK 754 A S + G +S D +++TA+DGT YT V + Sbjct: 175 THASASSTVNGVSVSSGTASSSIDLTENAATSIAVVITAQDGTTTGTYTFDVTR 228 >gb|EAA94529.1| unknown [environmental sequence] Length = 268 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 121/242 (50%), Gaps = 13/242 (5%) Query: 143 NTVKIVVVSQ-SGVREKTTLVNIIRKASSNADLSSL-VLSDG-----QLDPAYDKNQTRY 195 NT+ IVV Q SG K V I R+AS+ A ++ + VL D L P ++ T Y Sbjct: 19 NTISIVVTPQCSGSPTKIYDVAISRQASTVATMADVAVLEDTTGAAVSLSPTFEAGTTSY 78 Query: 196 AVTVDNQVSELAVTPTPEDVHATVSLNG-NVTPNAQPRWVDL-QVGVNEFNVLVQAEDGV 253 TV + V+ + VTPT A+ ++NG +V+ +DL + V++ A+DG Sbjct: 79 TATVAHSVTAVTVTPTATHASASSTVNGVSVSSGTASSSIDLTENAATSIAVVITAQDGT 138 Query: 254 TAKNYVLTIVRKASSDADLINITLSGKPLSGGFDRTTSTYFEYVANNIDSMAVTATTSDE 313 T Y + R+ SSDA L +I++SG+ + F T Y VAN + S+ VT T S Sbjct: 139 TTGTYTFDVTRQPSSDATLEDISVSGETVYPTFAATQLQYACDVANTVSSVQVTPTASHP 198 Query: 314 QATYTINGV----QSAGGVPVPLAVGENVVTIAVTAADKVTTKEYTVTIVRAASSNANLL 369 AT +NG +S L+ G VT+ VTA D T+ YTV I R+ SS+ L Sbjct: 199 GATIQVNGAVVASESLSASIALLSGGTETVTVEVTAQDGTTSITYTVNINRSPSSDCTLS 258 Query: 370 EL 371 L Sbjct: 259 NL 260 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 15/221 (6%) Query: 351 TKEYTVTIVRAASSNANLLELT-MTDLSDNAISLTPVM--GTLSYNGTVEDSVSAAKLKA 407 TK Y V I R AS+ A + ++ + D + A+SL+P GT SY TV SV+A + Sbjct: 34 TKIYDVAISRQASTVATMADVAVLEDTTGAAVSLSPTFEAGTTSYTATVAHSVTAVTVTP 93 Query: 408 VVDDANASTSVSVNGVWIEDLNA---VPLT-TGLNVIEVNVTAQDGSMK-VYTINLVRNP 462 A+AS++V NGV + A + LT I V +TAQDG+ YT ++ R P Sbjct: 94 TATHASASSTV--NGVSVSSGTASSSIDLTENAATSIAVVITAQDGTTTGTYTFDVTRQP 151 Query: 463 STDAALLEMRITPGELTPGFQPGIXXXXXXXXXXXXXXXXXIVTNHEAATYVLKKNGA-- 520 S+DA L ++ ++ + P F +H AT ++ NGA Sbjct: 152 SSDATLEDISVSGETVYPTFAATQLQYACDVANTVSSVQVTPTASHPGAT--IQVNGAVV 209 Query: 521 -STGVTGNTVALDEGTNQITVQVTAADASTQMTYTVTVNRA 560 S ++ + L GT +TV+VTA D +T +TYTV +NR+ Sbjct: 210 ASESLSASIALLSGGTETVTVEVTAQDGTTSITYTVNINRS 250 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 13/244 (5%) Query: 44 NNKYLIEVTAQ-DGVTKKSYSLFILRAPS------DVADXXXXXXXXXXXXPVFNNDDTG 96 +N I VT Q G K Y + I R S DVA P F T Sbjct: 18 SNTISIVVTPQCSGSPTKIYDVAISRQASTVATMADVAVLEDTTGAAVSLSPTFEAGTTS 77 Query: 97 YSVEVPNEVSSLEITPKLLDAAAGLSVDGNVHIDDTAYTKNLNVGMN---TVKIVVVSQS 153 Y+ V + V+++ +TP A+A +V+G V + + ++++ N ++ +V+ +Q Sbjct: 78 YTATVAHSVTAVTVTPTATHASASSTVNG-VSVSSGTASSSIDLTENAATSIAVVITAQD 136 Query: 154 GVREKTTLVNIIRKASSNADLSSLVLSDGQLDPAYDKNQTRYAVTVDNQVSELAVTPTPE 213 G T ++ R+ SS+A L + +S + P + Q +YA V N VS + VTPT Sbjct: 137 GTTTGTYTFDVTRQPSSDATLEDISVSGETVYPTFAATQLQYACDVANTVSSVQVTPTAS 196 Query: 214 DVHATVSLNGNV--TPNAQPRWVDLQVGVNEFNVLVQAEDGVTAKNYVLTIVRKASSDAD 271 AT+ +NG V + + L G V V A+DG T+ Y + I R SSD Sbjct: 197 HPGATIQVNGAVVASESLSASIALLSGGTETVTVEVTAQDGTTSITYTVNINRSPSSDCT 256 Query: 272 LINI 275 L N+ Sbjct: 257 LSNL 260 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 77/257 (29%), Positives = 130/257 (50%), Gaps = 25/257 (9%) Query: 241 NEFNVLVQAE-DGVTAKNYVLTIVRKASSDADLINI------TLSGKPLSGGFDRTTSTY 293 N +++V + G K Y + I R+AS+ A + ++ T + LS F+ T++Y Sbjct: 19 NTISIVVTPQCSGSPTKIYDVAISRQASTVATMADVAVLEDTTGAAVSLSPTFEAGTTSY 78 Query: 294 FEYVANNIDSMAVTATTSDEQATYTINGVQSAGGVPVP-LAVGENVVT---IAVTAADKV 349 VA+++ ++ VT T + A+ T+NGV + G + + EN T + +TA D Sbjct: 79 TATVAHSVTAVTVTPTATHASASSTVNGVSVSSGTASSSIDLTENAATSIAVVITAQDGT 138 Query: 350 TTKEYTVTIVRAASSNANLLELTMTDLSDNAISLTPVMGT--LSYNGTVEDSVSAAKLKA 407 TT YT + R SS+A T+ D+S + ++ P L Y V ++VS+ ++ Sbjct: 139 TTGTYTFDVTRQPSSDA-----TLEDISVSGETVYPTFAATQLQYACDVANTVSSVQVTP 193 Query: 408 VVDDANASTSVSVNGVWI--EDLNA--VPLTTGLNVIEVNVTAQDGSMKV-YTINLVRNP 462 A+ + VNG + E L+A L+ G + V VTAQDG+ + YT+N+ R+P Sbjct: 194 TASHPGAT--IQVNGAVVASESLSASIALLSGGTETVTVEVTAQDGTTSITYTVNINRSP 251 Query: 463 STDAALLEMRITPGELT 479 S+D L + PG +T Sbjct: 252 SSDCTLSNLFTNPGTVT 268 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 12/182 (6%) Query: 582 LNPEFSAEIFKYSLSVPYEVSQVELDALKGDINARLTVNGVTVDNPML---VKLAEGLNT 638 L+P F A Y+ +V + V+ V + +A TVNGV+V + + L E T Sbjct: 67 LSPTFEAGTTSYTATVAHSVTAVTVTPTATHASASSTVNGVSVSSGTASSSIDLTENAAT 126 Query: 639 -VNLKVTAQDGKTESVYEVEITRKSRSSNADLNNISVIAGALDPAFDPAVSEYTVEVEND 697 + + +TAQDG T Y ++TR+ SS+A L +ISV + P F +Y +V N Sbjct: 127 SIAVVITAQDGTTTGTYTFDVTRQ-PSSDATLEDISVSGETVYPTFAATQLQYACDVANT 185 Query: 698 VDSIALNPVVADTKAGSQIIG------RDGASLNHLVEGDNVFDILVTAEDGTVKI-YTV 750 V S+ + P + A Q+ G AS+ L G + VTA+DGT I YTV Sbjct: 186 VSSVQVTPTASHPGATIQVNGAVVASESLSASIALLSGGTETVTVEVTAQDGTTSITYTV 245 Query: 751 KV 752 + Sbjct: 246 NI 247 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 111/259 (42%), Gaps = 24/259 (9%) Query: 430 AVPLTTGL-NVIEVNVTAQ-DGS-MKVYTINLVRNPSTDAALLEMRI---TPG---ELTP 480 AV LT G N I + VT Q GS K+Y + + R ST A + ++ + T G L+P Sbjct: 10 AVLLTEGASNTISIVVTPQCSGSPTKIYDVAISRQASTVATMADVAVLEDTTGAAVSLSP 69 Query: 481 GFQPGIXXXXXXXXXXXXXXXXXIVTNHEAATYVLKKNGASTGVTGNTVALDEGTN---Q 537 F+ G H +A+ + NG S + ++D N Sbjct: 70 TFEAGTTSYTATVAHSVTAVTVTPTATHASASSTV--NGVSVSSGTASSSIDLTENAATS 127 Query: 538 ITVQVTAADASTQMTYTVTVNRAILPKXXXXXXXXXXXXXGTEILNPEFSAEIFKYSLSV 597 I V +TA D +T TYT V R + G E + P F+A +Y+ V Sbjct: 128 IAVVITAQDGTTTGTYTFDVTR----QPSSDATLEDISVSG-ETVYPTFAATQLQYACDV 182 Query: 598 PYEVSQVELDALKGDINARLTVNGVTVDNPMLVK----LAEGLNTVNLKVTAQDGKTESV 653 VS V++ A + VNG V + L L+ G TV ++VTAQDG T Sbjct: 183 ANTVSSVQVTPTASHPGATIQVNGAVVASESLSASIALLSGGTETVTVEVTAQDGTTSIT 242 Query: 654 YEVEITRKSRSSNADLNNI 672 Y V I R S SS+ L+N+ Sbjct: 243 YTVNINR-SPSSDCTLSNL 260 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 2/136 (1%) Query: 51 VTAQDGVTKKSYSLFILRAPSDVADXXXXXXXXXXXXPVFNNDDTGYSVEVPNEVSSLEI 110 +TAQDG T +Y+ + R PS A P F Y+ +V N VSS+++ Sbjct: 132 ITAQDGTTTGTYTFDVTRQPSSDATLEDISVSGETVYPTFAATQLQYACDVANTVSSVQV 191 Query: 111 TPKLLDAAAGLSVDGNVHIDD--TAYTKNLNVGMNTVKIVVVSQSGVREKTTLVNIIRKA 168 TP A + V+G V + +A L+ G TV + V +Q G T VNI R Sbjct: 192 TPTASHPGATIQVNGAVVASESLSASIALLSGGTETVTVEVTAQDGTTSITYTVNINRSP 251 Query: 169 SSNADLSSLVLSDGQL 184 SS+ LS+L + G + Sbjct: 252 SSDCTLSNLFTNPGTV 267 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.310 0.127 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 978,394,807 Number of extensions: 39518548 Number of successful extensions: 90301 Number of sequences better than 1.0e-05: 5 Number of HSP's gapped: 90264 Number of HSP's successfully gapped: 23 Length of query: 926 Length of database: 757,237,578 Length adjustment: 135 Effective length of query: 791 Effective length of database: 390,699,213 Effective search space: 309043077483 Effective search space used: 309043077483 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 131 (55.1 bits)