BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0126.0022.p (528 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00123196.1| COG1472: Beta-glucosidase-related glycosidase... 214 6e-54 ref|NP_561070.1| probable beta-hexosamidase A [Clostridium perfr... 199 2e-49 ref|NP_735128.1| Unknown [Streptococcus agalactiae NEM316] >gi|2... 199 2e-49 ref|NP_687720.1| glycosyl hydrolase, family 3 [Streptococcus aga... 197 6e-49 ref|NP_662998.1| beta-N-acetylglucosaminidase [Chlorobium tepidu... 189 1e-46 >ref|ZP_00123196.1| COG1472: Beta-glucosidase-related glycosidases [Haemophilus somnus 129PT] Length = 586 Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 157/523 (30%), Positives = 251/523 (47%), Gaps = 53/523 (10%) Query: 42 FGAMFFFSGEKDALNEEIASFRSACGIPPFIVTDLENGPGEMIQGAQRFPHMMGISQTDS 101 GA+ + G + + ++ ++ IP I + E G + I TD Sbjct: 58 IGAVRYNPGPAEEVYDQNYILQTKSKIPLLIAANTEAGGNGACSDGTEIGLQVKIGATDD 117 Query: 102 SELAYEIGRAAALEAGQIGYNWTFSPVVDQAIVPDSPVVSSRSAGQRPEQIIKIAGAYLR 161 ++ AYE+GR A +EA IG NW+F+P+VD + +P++S+R G PE++++++ AY++ Sbjct: 118 AKYAYEMGRVAGIEAAAIGCNWSFAPIVDISYNWRNPIISNRVFGSNPEKVLEMSLAYMK 177 Query: 162 GLQDNGMMATIKHFPGDGYDTLDQHLTTPVNRLSPDEWIKGPGRVFRELIESGAMAVMPG 221 G+Q++G+ KHFPGDG D DQHL+ VN S +EW G+V++ LI++G ++M G Sbjct: 178 GIQESGIAPAAKHFPGDGVDERDQHLSFSVNSFSCEEWDNTFGKVYQGLIDAGLPSLMAG 237 Query: 222 HIALPAFDSPDERGIYP--------PATVSRALLQDLLRGELGFRGLIVTDAMEMGGIAG 273 HI LPA+ E+ P PAT+S+ +L DLLRG+LGF G++VTDA M + Sbjct: 238 HIHLPAY----EQHFNPNLAYEDCLPATLSKPILTDLLRGKLGFNGVVVTDASHMVAMTS 293 Query: 274 FMNYYDACAAALENGCDMLLFPRIEERFYLEMERCYSEGKLTRESLIDRACRVLSLKEQM 333 M + A+ GCD+ LF + + M Y G +T E L D R+L LK ++ Sbjct: 294 AMKRSEMLPTAIAAGCDLFLFFNDPDEDFGYMMEGYKNGIITEERLHDALTRILGLKAKL 353 Query: 334 GLLAADSAPVRE-REQ-------PDRDAITR-LAERAVAESLTLVKDRAGGVPFPLKSET 384 GL + E +EQ P+ AI R +A++A+ TLVK + P ++ Sbjct: 354 GLHNRPRETLLEPKEQALAKIGLPEHKAIFRDVADKAI----TLVKHKQDIFPINVERFP 409 Query: 385 RVLHVIIMNYADRYTGMY--------DRIRTELEKYSDHVDQWIDP--------GPERLF 428 R+L V + + M + ++ +LE+ V + P E++ Sbjct: 410 RILLVNVKGTDGGFGKMVAGSQRSATEILKEKLEEKGFTVSIYTSPMDNILKMSDEEQVK 469 Query: 429 TAALPGTYDLILCSIGSRQDYGLNVTRLHGEVARNMMGGWTKLGT----------PVIFV 478 T + + ++ D +NV + + ++ TK GT P IFV Sbjct: 470 TIRNEYSQKRPITTLTDHYDLIINVANVQMSTVQRIVWQATK-GTPDIPFYVHEVPTIFV 528 Query: 479 SHFHPFIHKEYTASIDTLINTYGDIECTASLLVATIAGERPIR 521 S PF H + T IN Y E T LLV + G + Sbjct: 529 SVQCPF-HLVDVPQVKTYINAYDGKEPTIELLVEKLMGNSEFK 570 >ref|NP_561070.1| probable beta-hexosamidase A [Clostridium perfringens] dbj|BAB79860.1| probable beta-hexosamidase A [Clostridium perfringens str. 13] Length = 589 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 150/522 (28%), Positives = 242/522 (46%), Gaps = 47/522 (9%) Query: 42 FGAMFFFSGEKDALNEEIASFRSACGIPPFIVTDLENGPGEMIQGAQRFPHMMGISQTDS 101 GA+ + G+ + + E+ + IP I + E G + + I+ T Sbjct: 57 IGAVRYNPGKAEEVYEQNRILQENSKIPLLIAANTEAGGNGACTDGTYVGNEVKIAATQD 116 Query: 102 SELAYEIGRAAALEAGQIGYNWTFSPVVDQAIVPDSPVVSSRSAGQRPEQIIKIAGAYLR 161 AYE+GR + +EA IG NW+F+P+VD +P++S+R+ +Q ++++ Y+R Sbjct: 117 PHYAYELGRISGIEASAIGCNWSFAPIVDINRNWRNPIISTRTWSADADQTLELSLEYMR 176 Query: 162 GLQDNGMMATIKHFPGDGYDTLDQHLTTPVNRLSPDEWIKGPGRVFRELIESGAMAVMPG 221 G+ ++G++ KHFPGDG D DQHL+ N LS +EW G+V+ LIE+G ++M G Sbjct: 177 GIMESGILPAAKHFPGDGIDERDQHLSFAPNTLSVEEWNATFGKVYSGLIEAGLPSIMAG 236 Query: 222 HIALP---AFDSPDE--RGIYPPATVSRALLQDLLRGELGFRGLIVTDAMEMGGIAGFMN 276 HIALP + +PD + + PAT+S+ +L DLL+G++GF GL+VTDA M + M Sbjct: 237 HIALPEYVKYFNPDATIKEMNMPATLSKYILTDLLKGQMGFNGLVVTDASHMVAMTSAMK 296 Query: 277 YYDACAAALENGCDMLLFPRIEERFYLEMERCYSEGKLTRESLIDRACRVLSLKEQMGLL 336 D A+ G D+ LF + + M Y G +T E L D R+L LK +GL Sbjct: 297 RKDMLPTAIAAGSDLFLFFNDPDEDFQWMMEGYKNGVITEERLHDALTRILGLKASLGLH 356 Query: 337 AADSAPVREREQPDRDAITRLA----ERAVAE----SLTLVKDRAGGVPFPLKSETRVLH 388 + QP +A+ ++ ++A E ++TLVK+ P RVL Sbjct: 357 KKAKTEIL---QPKEEAMAKIGLEENKKAALEIADKAITLVKNNEEIFPISPDKTKRVLL 413 Query: 389 VIIMNYADRY-----------TGMYDRIRTELEKYSDHVDQWIDPG------PERLFTAA 431 V + + + G D ++ LE+ V+ + P P+ AA Sbjct: 414 VKVKGFDGGFGKFLALMQGAQKGPVDIMKELLEQEGFQVEIYESPVDKIMKLPKEEMGAA 473 Query: 432 LPGTY--DLILCSIGSRQDYGLNVTRLHGEVARNMMGGWTKLGT----------PVIFVS 479 + Y + + S+ D +N+ + V + + +K GT P IF+S Sbjct: 474 IGNIYAGKRPIAELTSKYDLIINLADVGASVDQRLQWPPSK-GTPDIPFYVNEIPTIFIS 532 Query: 480 HFHPFIHKEYTASIDTLINTYGDIECTASLLVATIAGERPIR 521 PF H + T IN Y E LV + G + Sbjct: 533 LQCPF-HLADVPQVKTYINAYDSKEFNIKALVDKMMGRSEFK 573 >ref|NP_735128.1| Unknown [Streptococcus agalactiae NEM316] emb|CAD46322.1| Unknown [Streptococcus agalactiae NEM316] Length = 596 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 151/523 (28%), Positives = 250/523 (47%), Gaps = 57/523 (10%) Query: 42 FGAMFFFSGEKDALNEEIASFRSACGIPPFIVTDLENGPGEMIQGAQRFPHMMGISQTDS 101 A+ + G + ++ ++ +P I + E G + + + ++ T+ Sbjct: 60 IAAVRYNRGSSSEIYDQNLILQTKSKLPMLIAANTEAGGDGAVTDGTKVGDEIKVAATND 119 Query: 102 SELAYEIGRAAALEAGQIGYNWTFSPVVDQAIVPDSPVVSSRSAGQRPEQIIKIAGAYLR 161 + AYE+GR A +EA +G N +F+P+VD +P+++SR+ G +QII ++ Y++ Sbjct: 120 PKYAYEMGRIAGMEASAVGCNASFAPIVDLTRNWRNPIIASRNWGANVDQIISLSKEYMK 179 Query: 162 GLQDNGMMATIKHFPGDGYDTLDQHLTTPVNRLSPDEWIKGPGRVFRELIESGAMAVMPG 221 G+ ++ KHFPGDG D D HL+ N +S +EW+ GR++ EL ++G VM G Sbjct: 180 GIMQYNIVPFAKHFPGDGIDERDHHLSFASNPMSKEEWMSTFGRIYGELADAGLPGVMAG 239 Query: 222 HIALPAFDSPDERGIYP--------PATVSRALLQDLLRGELGFRGLIVTDAMEMGGIAG 273 HI LP E+ ++P PA++++ LL +LLRGELG+ G IVTDA M G+ Sbjct: 240 HIHLPNV----EKEMHPERDLDDMLPASLNKTLLDELLRGELGYNGAIVTDASHMVGMTA 295 Query: 274 FMNYYDACAAALENGCDMLLFPRIEERFYLEMERCYSEGKLTRESLIDRACRVLSLKEQM 333 M+ D A+E GCD+ LF + M+ Y +G LT E L D R L LK ++ Sbjct: 296 SMSRRDLLPTAIEAGCDLFLFFNDPDEDIQWMKEGYEKGILTEERLHDALRRTLGLKAKL 355 Query: 334 GLLAADSAPVREREQPDRDAIT--------RLAERAVAESLTLVKDRAGGVPFPLKSETR 385 GL + +E P A+ ++A+ +++TLVKD+ + FP+ E R Sbjct: 356 GLHNYEGRR-QELFMPKDKAMALINTSESQKIADEVADKAVTLVKDKQKDI-FPVNPE-R 412 Query: 386 VLHVIIMNYADRYTGMY------------DRIRTELEKYSDHVDQW------IDPGPERL 427 H++++N + Y G + D ++ LE V W I P+ Sbjct: 413 YRHILLVN-VEGYKGGFGAMIAGNKQRASDYMKELLEARGHEVTVWESTEERIMKLPQEE 471 Query: 428 FTAALPGTY--DLILCSIGSRQDYGLNVTRLH-GEVARNMMGGWTKLGT----------P 474 AA+ Y + ++ R D +N+ ++ G + ++ K GT P Sbjct: 472 RAAAIANVYAQKQPIANLTDRYDLIINLVDVNAGGTTQRIIWPAAK-GTPDQPFYVHEIP 530 Query: 475 VIFVSHFHPFIHKEYTASIDTLINTYGDIECTASLLVATIAGE 517 I +S H F + + T IN Y + T S +VA +AGE Sbjct: 531 SIVISVQHAFALAD-MPQVGTYINAYDGLPSTISAVVAKLAGE 572 >ref|NP_687720.1| glycosyl hydrolase, family 3 [Streptococcus agalactiae 2603V/R] gb|AAM99592.1| glycosyl hydrolase, family 3 [Streptococcus agalactiae 2603V/R] Length = 596 Score = 197 bits (500), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 151/523 (28%), Positives = 248/523 (47%), Gaps = 57/523 (10%) Query: 42 FGAMFFFSGEKDALNEEIASFRSACGIPPFIVTDLENGPGEMIQGAQRFPHMMGISQTDS 101 A+ + G + ++ ++ +P I + E G + + + ++ T+ Sbjct: 60 IAAVRYNRGSSSEIYDQNLILQTKSKLPMLIAANTEAGGDGAVTDGTKVGDEIKVAATND 119 Query: 102 SELAYEIGRAAALEAGQIGYNWTFSPVVDQAIVPDSPVVSSRSAGQRPEQIIKIAGAYLR 161 + AYE+GR A +EA +G N +FSP+VD +P+++SR+ G +QII ++ Y++ Sbjct: 120 PKYAYEMGRIAGMEASAVGCNASFSPIVDLTRNWRNPIIASRNWGANVDQIISLSKEYMK 179 Query: 162 GLQDNGMMATIKHFPGDGYDTLDQHLTTPVNRLSPDEWIKGPGRVFRELIESGAMAVMPG 221 G+ ++ KHFPGDG D D HL+ N +S +EW+ GR++ EL ++G VM G Sbjct: 180 GIMQYNIVPFAKHFPGDGIDERDHHLSFASNPMSKEEWMSTFGRIYGELADAGLPGVMAG 239 Query: 222 HIALPAFDSPDERGIYP--------PATVSRALLQDLLRGELGFRGLIVTDAMEMGGIAG 273 HI LP E+ ++P PA++++ LL +LLRGELG+ G IVTDA M G+ Sbjct: 240 HIHLPNV----EKEMHPERDLDDMLPASLNKTLLDELLRGELGYNGAIVTDASHMVGMTA 295 Query: 274 FMNYYDACAAALENGCDMLLFPRIEERFYLEMERCYSEGKLTRESLIDRACRVLSLKEQM 333 M D A+E GCD+ LF + M+ Y +G LT E L D R L LK ++ Sbjct: 296 SMARRDLLPTAIEAGCDLFLFFNDPDEDIQWMKEGYEKGILTEERLHDALRRTLGLKAKL 355 Query: 334 GLLAADSAPVREREQPDRDAIT--------RLAERAVAESLTLVKDRAGGVPFPLKSETR 385 GL + +E P A+ ++A+ +++TLVKD+ + FP+ E R Sbjct: 356 GLHNYEGRR-QELFMPKDKAMALINTLESQKIADEVADKAVTLVKDKQKDI-FPVNPE-R 412 Query: 386 VLHVIIMNYADRYTGMY------------DRIRTELEKYSDHVDQW------IDPGPERL 427 H++++N + Y G + D ++ LE V W I P+ Sbjct: 413 YRHILLVN-VEGYKGGFGAMIAGNKQRASDYMKELLEARGHEVTVWESTEERIMKLPQEE 471 Query: 428 FTAALPGTY--DLILCSIGSRQDYGLNVTRLH-GEVARNMMGGWTKLGTP---------- 474 AA+ Y + ++ D +N+ ++ G + ++ K GTP Sbjct: 472 RAAAIANVYAQKQPIANLTEHYDLIINLVDVNAGGTTQRIIWPAAK-GTPDQPFYVHEIP 530 Query: 475 VIFVSHFHPFIHKEYTASIDTLINTYGDIECTASLLVATIAGE 517 I +S H F + + T IN Y + T S +VA +AGE Sbjct: 531 SIVISVQHAFALAD-MPQVGTYINAYDGLPSTISAVVAKLAGE 572 >ref|NP_662998.1| beta-N-acetylglucosaminidase [Chlorobium tepidum TLS] gb|AAM73340.1| beta-N-acetylglucosaminidase [Chlorobium tepidum TLS] Length = 564 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 140/490 (28%), Positives = 238/490 (48%), Gaps = 27/490 (5%) Query: 41 EFGAMFFFSGEKDALNEEIASFRSACGIPPFIVTDLENGPGEMIQGAQRFPHMMGISQTD 100 + G + F G+ + F+ +P + D+E G + GA +F M IS Sbjct: 73 KIGGIMFLKGDVQSAGILANHFQELSKVPLLVSADMEKGVAMRLDGATKFSPAMAISAAG 132 Query: 101 SSELAYEIGRAAALEAGQIGYNWTFSPVVDQAIVPDSPVVSSRSAGQRPEQIIKIAGAYL 160 + LA + A EA IG + ++P VD I P +PV+++RS G R + ++ A + Sbjct: 133 NPALARRMAEIVAREARAIGIHQNYAPTVDLNINPANPVINTRSFGDRIPLVNAMSAAVI 192 Query: 161 RGLQDNGMMATIKHFPGDGYDTLDQHLTTPV---NRLSPDEWIKGPGRVFRELIESGAMA 217 GLQ NG+ AT KHFPG G T+D HL PV +R + + P FR I +G ++ Sbjct: 193 DGLQSNGVAATAKHFPGHGDVTVDSHLALPVLEGDRRRLENYELKP---FRSAIANGVLS 249 Query: 218 VMPGHIALPAFDSPDERGIYPPATVSRALLQDLLRGELGFRGLIVTDAMEMGGI-AGFMN 276 VM GH+A+P G PA++SR ++ LLR ELGF+GLIVTDA+ M + + + Sbjct: 250 VMVGHLAVPKLT-----GTMEPASLSRTIVTGLLRNELGFKGLIVTDALNMKALQSNGLT 304 Query: 277 YYDACAAALENGCDMLLFPRIEERFYLEMERCYSEGKLTRESLIDRACRVLSLKEQMGL- 335 + A++ G DMLLFP E + + G+++ + + R+L +K +GL Sbjct: 305 PGEVAVRAVQAGNDMLLFPEDPELVFDAVCAAVENGEISEQQIDHSVQRILQMKHWLGLD 364 Query: 336 --LAADSAPVREREQPDRDAITRLAERAVAESLTLVKDRAGGVPFPLKSETRVLHVIIMN 393 D + + ER + R+AE+ +SLTL++DR +P +++++I+ + Sbjct: 365 RRKLVDLSRLSERVGTKEN--KRIAEQIAEQSLTLLRDRNRTIPLRFPQNGQLVNIILND 422 Query: 394 YADRYTG--MYDRIRTELEKYSDHVDQWIDPGPERLFTAALPGTYDLILCSIGSRQDYGL 451 + G D +RT S + P + + A+ +IL + Q + Sbjct: 423 RPGQKVGREFVDTLRTSYNVTSLRLTPQSQPEFFQEASRAVAHASAVILTT--GIQAWSK 480 Query: 452 NV----TRLHGEVARNMMGGWTKLGTPVIFVSHFHPFIHKEYTASIDTLINTYGDIECTA 507 +V ++L + R++ K GTP++F+S P+I + I + + Y + E T Sbjct: 481 SVPSGLSQLQCDFVRSLPSMAPK-GTPILFISFGTPYILDAF-PEIGSALCAYSENEETD 538 Query: 508 SLLVATIAGE 517 + ++ + GE Sbjct: 539 AAILKALKGE 548 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.138 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 789,672,604 Number of extensions: 33083367 Number of successful extensions: 84981 Number of sequences better than 1.0e-05: 467 Number of HSP's gapped: 84536 Number of HSP's successfully gapped: 467 Length of query: 528 Length of database: 757,237,578 Length adjustment: 130 Effective length of query: 398 Effective length of database: 404,274,708 Effective search space: 160901333784 Effective search space used: 160901333784 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 128 (53.9 bits)