BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0010.p (162 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_347643.1| Predicted acetyltransferase [Clostridium acetob... 124 9e-28 gb|EAJ45953.1| unknown [environmental sequence] 109 2e-23 gb|EAJ53643.1| unknown [environmental sequence] 108 4e-23 ref|NP_562285.1| probable acetyltransferase [Clostridium perfrin... 105 4e-22 gb|EAJ41059.1| unknown [environmental sequence] 101 7e-21 >ref|NP_347643.1| Predicted acetyltransferase [Clostridium acetobutylicum] pir||D97024 probable acetyltransferase [imported] - Clostridium acetobutylicum gb|AAK78983.1| Predicted acetyltransferase [Clostridium acetobutylicum] Length = 174 Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 88/150 (58%) Query: 1 MELIAKCVQVMQAGGSDQWNESYPNQEVISEDVDNGTLYAYEEQGAIAGIIVLDEEQAEQ 60 +++I+ C++ M++ G QW+E YP+ ++I D+ Y ++ + ++E+Q + Sbjct: 23 IDIISNCIRYMKSQGIYQWDEFYPSSDIIENDIKRKDCYVLKDNERCVAYVAINEQQPPE 82 Query: 61 YDAIDWAEGQGPHLMMHRLAVHPEVQGKGIARKLIAFAEEHARSRGYTSIRLDTYAKNAR 120 Y IDW + L++HRL V PE QG+GIA+K++ F E+ A Y+SIRLD Y+ N + Sbjct: 83 YSQIDWLTHEKKILVIHRLCVQPEFQGRGIAKKILKFIEDLATKNNYSSIRLDAYSGNNK 142 Query: 121 ALALYPSLGYEYRGVVDFPGRTANFSVFEK 150 AL LY +L Y+ G P R F +EK Sbjct: 143 ALKLYSNLDYKKVGQFYLPVRDLPFYCYEK 172 >gb|EAJ45953.1| unknown [environmental sequence] Length = 161 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 1/152 (0%) Query: 2 ELIAKCVQVMQAGGSDQWNESYPNQEVISEDVDNGTLYAYEEQGAIAGIIVLDEEQAEQY 61 E+ C + M QWN+ YP++E+ ED+ N +LY + + G I+ + + Y Sbjct: 9 EIAEACAKNMIENNIFQWNDKYPSREIFKEDIKNKSLYVSKINQEVVGCIMFSFRKDDVY 68 Query: 62 DAIDWAEGQGPHLMMHRLAVHPEVQGKGIARKLIAFAEEHARSRGYTSIRLDTYAKNARA 121 ++W +L +HRLAV P Q +GIARK++ FAE+ A+S S+RLDT+++N R Sbjct: 69 KTVNWITEDEYNLYIHRLAVDPIFQKRGIARKMMDFAEDFAKSNNCISVRLDTFSQNPRN 128 Query: 122 LALYPSLGYEYRGVVDFPGRTA-NFSVFEKVL 152 Y S GY V FP ++ F +EK++ Sbjct: 129 NKFYKSRGYNKLDDVYFPRQSEFPFHCYEKLV 160 >gb|EAJ53643.1| unknown [environmental sequence] Length = 168 Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/147 (38%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Query: 7 CVQVMQAGGSDQWNESYPNQEVISEDVDNGTLYAYEEQGAIAGIIVLDEEQAEQYDAIDW 66 C M + QWNE YP++EV +D+++G+LY E + + G IVL + + + Y + W Sbjct: 21 CAIDMASYSIFQWNEKYPSREVFKKDIESGSLYVIEIKKNVIGCIVLSDFKDDVYKDVKW 80 Query: 67 AEGQGPHLMMHRLAVHPEVQGKGIARKLIAFAEEHARSRGYTSIRLDTYAKNARALALYP 126 +L +HRLAV P Q G RKL+ FAE A + SIRLDT++ N R Y Sbjct: 81 LTEDSKNLYIHRLAVDPSFQKNGNGRKLMDFAESFAVENNFVSIRLDTFSLNHRNNKFYK 140 Query: 127 SLGYEYRGVVDFPGRTA-NFSVFEKVL 152 S GY V FP ++ F +EKVL Sbjct: 141 SRGYTRLENVFFPMQSEFPFHCYEKVL 167 >ref|NP_562285.1| probable acetyltransferase [Clostridium perfringens] dbj|BAB81075.1| probable acetyltransferase [Clostridium perfringens str. 13] Length = 167 Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 73/127 (57%), Gaps = 1/127 (0%) Query: 8 VQVMQAGGSDQWNESYPNQEVISEDVDNGTLYAYEEQGAIAGIIVLDEEQAEQYDAIDWA 67 V+ M G WNESYPN E+I +D+ N LY E G I + +++ + Y+ I W Sbjct: 22 VKEMNLRGLYNWNESYPNTEIIFKDISNKHLYGIEASGEIVAVATINDYAYDVYNDIAW- 80 Query: 68 EGQGPHLMMHRLAVHPEVQGKGIARKLIAFAEEHARSRGYTSIRLDTYAKNARALALYPS 127 + GP L HR+AV P +GKG RK+I F EE A+ + SIR+ Y KN A+ LY + Sbjct: 81 QVDGPFLSFHRIAVSPSHRGKGYGRKMIDFVEEMAKEKKCNSIRISAYHKNENAVNLYKN 140 Query: 128 LGYEYRG 134 LGY + G Sbjct: 141 LGYVHVG 147 >gb|EAJ41059.1| unknown [environmental sequence] Length = 174 Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 2/154 (1%) Query: 1 MELIAKCVQVMQAGGSDQWNESYPNQEVISEDVDNGTLYAYEEQGA-IAGIIVLDEEQAE 59 M +I C + M + QWNE YPN E D++N LY + + G + + E + Sbjct: 20 MAIIRSCTEHMISKNIFQWNEKYPNIETFQADINNEHLYVLANKDEELIGCVSITFEMDD 79 Query: 60 QYDAIDWAEGQGPHLMMHRLAVHPEVQGKGIARKLIAFAEEHARSRGYTSIRLDTYAKNA 119 Y IDW ++ +HRLAVHP QG+G A+ ++ + E A S+RLDT++ N Sbjct: 80 FYKKIDWTSSSNKNIYVHRLAVHPNYQGQGHAKTIMNWIENKAIENKCESVRLDTFSMNN 139 Query: 120 RALALYPSLGYEYRGVVDFPGRT-ANFSVFEKVL 152 + LY +LGY+ G + F ++ F+ +EK L Sbjct: 140 KNNTLYTNLGYQKLGQIYFRDQSEMPFNCYEKPL 173 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.315 0.133 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 250,033,591 Number of extensions: 9672511 Number of successful extensions: 25023 Number of sequences better than 1.0e-05: 50 Number of HSP's gapped: 25059 Number of HSP's successfully gapped: 50 Length of query: 162 Length of database: 757,237,578 Length adjustment: 116 Effective length of query: 46 Effective length of database: 442,286,094 Effective search space: 20345160324 Effective search space used: 20345160324 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 121 (51.2 bits)