BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0109.0013.p (584 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_224533.1| CT085 hypothetical protein [Chlamydophila pneum... 440 e-122 ref|NP_829322.1| conserved hypothetical protein TIGR00148 [Chlam... 436 e-120 ref|NP_219588.1| hypothetical protein [Chlamydia trachomatis] >g... 431 e-119 ref|NP_712508.1| conserved hypothetical protein [Leptospira inte... 429 e-118 gb|AAS70210.1| conserved hypothetical protein [Leptospira interr... 428 e-118 >ref|NP_224533.1| CT085 hypothetical protein [Chlamydophila pneumoniae CWL029] ref|NP_300387.1| CT085 hypothetical protein [Chlamydophila pneumoniae J138] ref|NP_444977.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] ref|NP_876614.1| hypothetical protein [Chlamydophila pneumoniae TW-183] sp|Q9Z8L0|Y328_CHLPN Hypothetical protein CPn0328/CP0429/CPj0328/CpB0338 pir||A72092 conserved hypothetical protein CP0429 [imported] - Chlamydophila pneumoniae (strains CWL029 and AR39) pir||H86531 CT085 hypothetical protein [imported] - Chlamydophila pneumoniae (strain J138) gb|AAD18477.1| CT085 hypothetical protein [Chlamydophila pneumoniae CWL029] gb|AAF38271.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] dbj|BAA98538.1| CT085 hypothetical protein [Chlamydophila pneumoniae J138] gb|AAP98271.1| hypothetical protein CpB0338 [Chlamydophila pneumoniae TW-183] Length = 584 Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust. Identities = 240/589 (40%), Positives = 336/589 (57%), Gaps = 19/589 (3%) Query: 1 LRQWIEQLRKDKDLAVIDAPVDPYLELAEIHRRVVREEGPALLFTNVKDTPFPVATNLFG 60 LR+ I R K L + APV P LELAEIHRRV+ ++GPALLF NV + FPV TNLFG Sbjct: 4 LRRHISLFRSQKQLIDVFAPVSPNLELAEIHRRVIEDQGPALLFHNVIGSSFPVLTNLFG 63 Query: 61 TVRRANQAFGTRPEQLVKTLMGAMETLLPPTASGXXXXXXXXXXXXXVGTRNVPQGEAPV 120 T R +Q F P+ L+ + + + P S +G + P Sbjct: 64 TKHRVDQLFSQAPDNLIARVAHLISS--TPKLSSLWKSRDLLKRISSLGLKKARFRRFPF 121 Query: 121 LGVCRSTEPLKELPRITGWQEEGGPSLTLPLVYTES--ITHPQNHNLGIYRVQIYDDSKA 178 V S+ L LP +T W E+GG LTLPLVYTES +T P NLG+YRVQ ++ + Sbjct: 122 --VSMSSVNLDHLPLLTSWPEDGGAFLTLPLVYTESPTLTTP---NLGMYRVQRFNQNTM 176 Query: 179 GVYWQKHKGGGFHHREAEQLGEPLPVSVFLGGXXXXXXXXXXXVQERXXXXXXXXXXXXX 238 G+++Q KGGG H EAEQ + LPVSVFL G + E Sbjct: 177 GLHFQIQKGGGMHLYEAEQKKQNLPVSVFLSGNPFLTLSAIAPLPENVSELLFATFLQGA 236 Query: 239 XXQMVKDPMGGHQIPAEAEFAIRGLIAPHERRAEGPFGDHYGFYSAPLHFPVMHVQRIWH 298 K H + +AEF + G +RR EGPFGDH+G+YS FP H +I+H Sbjct: 237 KLLYKKTNDHPHPLLYDAEFILVGESPAGKRRPEGPFGDHFGYYSLQHDFPEFHCHKIYH 296 Query: 299 RKDAIFPATIIGKPRQEDYYLREYIQRLLAPVYPLLMPSVKALWEYSECGPHSLVSAVVR 358 RKDAI+PAT++GKP QED+Y+ +Q L+P++PL+MP V+ L Y E G H+L +AVV+ Sbjct: 297 RKDAIYPATVVGKPYQEDFYIGNKLQEYLSPLFPLVMPGVRRLKSYGESGFHALTAAVVK 356 Query: 359 ESYPREAVVSAYRILGEGQLSLTKFLLLTNEPVELAEFPKLLESVLERFNPASDFLVYGN 418 E Y RE++ +A RILGEGQLSLTKFL++T++ V L F +LE++LER P D +++ Sbjct: 357 ERYWRESLTTALRILGEGQLSLTKFLMVTDQEVPLDRFSVVLETILERLQPDRDLIIFSE 416 Query: 419 AAPDEQDHSPNAMNPGSKAIMLGVGNPVRELPSAYTEGLLPGITEAIPYCRGCLAVSGAS 478 A D D++ ++N GSK I +G+G +R+LP Y G + G+ + P+CRGCL + Sbjct: 417 TANDTLDYTGPSLNKGSKGIFMGIGKAIRDLPHGYQGGKIHGVQDIAPFCRGCLVL---- 472 Query: 479 YEEDPELPSRLIAAL--RAQETAWPLVFVVDNAPDTVRTQTSFLWTVFTRFDPASDIYAE 536 + L R I +L +WPL+ + DN +T++++ FLW FTR PA+D++A Sbjct: 473 ---ETSLEDRCIKSLLHHPDLKSWPLIILADNLRETIQSEKDFLWRTFTRCAPANDLHAL 529 Query: 537 Y-EIKSHHIGYKLPLVIDARMKRDYPEELVPREDIVQRVDRNWNSYFPH 584 + +H Y P VIDA MK YP+E+ Q+V W++YFP+ Sbjct: 530 HSHFATHRPNYNFPFVIDALMKPSYPKEVEVDPSTKQKVSERWHAYFPN 578 >ref|NP_829322.1| conserved hypothetical protein TIGR00148 [Chlamydophila caviae GPIC] sp|O34023|Y454_CHLCV Hypothetical protein CCA00454 (ORFF) gb|AAB71513.1| hypothetical protein [Chlamydophila caviae] gb|AAP05200.1| conserved hypothetical protein TIGR00148 [Chlamydophila caviae GPIC] Length = 581 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 238/586 (40%), Positives = 338/586 (57%), Gaps = 15/586 (2%) Query: 1 LRQWIEQLRKDKDLAVIDAPVDPYLELAEIHRRVVREEGPALLFTNVKDTPFPVATNLFG 60 LR+ + LR DL I APVDPYLEL EIHRRV+ +GPALLF NV+ FPV TNLFG Sbjct: 6 LRRLVSLLRSQNDLIDIFAPVDPYLELPEIHRRVIENQGPALLFHNVQGASFPVLTNLFG 65 Query: 61 TVRRANQAFGTRPEQLVKTLMGAMETLLPPTASGXXXXXXXXXXXXXVGTRNVPQGEAPV 120 T +R +Q F P+ L+ ++ + + PP S +G R + P Sbjct: 66 TQKRVDQIFSKVPKGLIPQVIHLLSS--PPKLSQLWKHRNLLLRGLSLGLRKARFLKFPH 123 Query: 121 LGVCRSTEPLKELPRITGWQEEGGPSLTLPLVYTESITHPQNHNLGIYRVQIYDDSKAGV 180 + ++ L +LP +T W E+GG LTLPLVYTES + + NLG+YR+Q +D G+ Sbjct: 124 KKM--ASVDLHQLPMLTSWPEDGGAFLTLPLVYTESPS-SKIPNLGMYRMQRFDRDTLGL 180 Query: 181 YWQKHKGGGFHHREAEQLGEPLPVSVFLGGXXXXXXXXXXXVQERXXXXXXXXXXXXXXX 240 ++Q KGGG H EAEQ E LPV+VFL G + E Sbjct: 181 HFQIQKGGGMHFYEAEQKNENLPVTVFLSGNPFLILSAIAPLPENISELLLCTFLQGSKL 240 Query: 241 QMVKDPMGGHQIPAEAEFAIRGLIAPHERRAEGPFGDHYGFYSAPLHFPVMHVQRIWHRK 300 DP H + ++EF + G +ERR EGPFGDH+G+YS FP ++I+HRK Sbjct: 241 HYKNDPDTPHPLLYDSEFILIGEGICNERRPEGPFGDHFGYYSLQHDFPAFKCRKIYHRK 300 Query: 301 DAIFPATIIGKPRQEDYYLREYIQRLLAPVYPLLMPSVKALWEYSECGPHSLVSAVVRES 360 DAI+PATI+GKP QED+YL +Q L+P++P++MP V+ L Y E G H+L AVV+E Sbjct: 301 DAIYPATIVGKPYQEDFYLGNKLQEYLSPLFPMVMPGVRQLKSYGEAGFHALTGAVVKER 360 Query: 361 YPREAVVSAYRILGEGQLSLTKFLLLTNEPVELAEFPKLLESVLERFNPASDFLVYGNAA 420 Y +E++ ++ RILGEGQLSLTKFL++T+ V+L FPKLLE++L R P D +++ + Sbjct: 361 YWKESLATSLRILGEGQLSLTKFLMITDHHVDLDNFPKLLETILSRIVPERDLIIFSETS 420 Query: 421 PDEQDHSPNAMNPGSKAIMLGVGNPVRELPSAYTEGLLPGITEAIPYCRGCLAVSGASYE 480 D D++ +N GSKAI +G+G +R+LP Y LP IT +C GCL + + Sbjct: 421 NDTLDYTGPKLNKGSKAIFMGIGPAIRDLPHKYRGKSLPNITNMGTFCPGCLVLETTLQQ 480 Query: 481 EDPELPSRLIAALRAQE--TAWPLVFVVDNAPDTVRTQTSFLWTVFTRFDPASDIYAEYE 538 + I AL ++WPLV + +N +T+ + FLW FTR PA+D++ + Sbjct: 481 VN-------IDALLNHPDLSSWPLVVLTENLNETLASSKDFLWKTFTRLAPATDLHVRFS 533 Query: 539 IKSHHI-GYKLPLVIDARMKRDYPEELVPREDIVQRVDRNWNSYFP 583 +HH Y P+++++ MK YP+E+ E +Q+V WN YFP Sbjct: 534 NVAHHRPNYTFPILLNSLMKPHYPKEVEADETTIQKVSHRWNEYFP 579 >ref|NP_219588.1| hypothetical protein [Chlamydia trachomatis] sp|O84087|Y085_CHLTR Hypothetical protein CT085 pir||E71557 hypothetical protein CT085 - Chlamydia trachomatis (serotype D, strain UW3/Cx) gb|AAC67676.1| hypothetical protein [Chlamydia trachomatis] Length = 579 Score = 431 bits (1108), Expect = e-119, Method: Compositional matrix adjust. Identities = 244/588 (41%), Positives = 337/588 (57%), Gaps = 17/588 (2%) Query: 1 LRQWIEQLRKDKDLAVIDAPVDPYLELAEIHRRVVREEGPALLFTNVKDTPFPVATNLFG 60 LR ++ LR +L I PVDP+LE+AEIHRRVV EGPALLF VK +PFPV TNLFG Sbjct: 4 LRSLVDYLRSQHELIDIHVPVDPHLEIAEIHRRVVEREGPALLFHQVKGSPFPVLTNLFG 63 Query: 61 TVRRANQAFGTRPEQLVKTLMGAMETLLPPTASGXXXXXXXXXXXXXVGTRNVPQGEAPV 120 T RR + F L + ++ + + +S +G R +P Sbjct: 64 TRRRVDLLFPDLSSDLFEQIIHLLSSPPS-FSSLWKHRSLFKRGISALGMRKRHLRPSPF 122 Query: 121 LGVCRSTEPLKELPRITGWQEEGGPSLTLPLVYTESITHPQNH--NLGIYRVQIYDDSKA 178 L + L +LP +T W E+GGP LTLPLVYT+S P+N NLG+YR+Q +D Sbjct: 123 L--YQDAPNLSQLPMLTSWPEDGGPFLTLPLVYTQS---PENGVPNLGMYRMQRFDKETL 177 Query: 179 GVYWQKHKGGGFHHREAEQLGEPLPVSVFLGGXXXXXXXXXXXVQERXXXXXXXXXXXXX 238 G+++Q KGGG H EAEQ + LPV+VFL G + E Sbjct: 178 GLHFQIQKGGGAHFFEAEQKKQNLPVTVFLSGNPFLILSAIAPLPENVPELLFCSFLQNK 237 Query: 239 XXQMV-KDPMGGHQIPAEAEFAIRGLIAPHERRAEGPFGDHYGFYSAPLHFPVMHVQRIW 297 V K P GH + ++EF + G ERR EGPFGDH+G+YS FP+ ++ Sbjct: 238 KLSFVEKHPQSGHPLLCDSEFILTGEAVAGERRPEGPFGDHFGYYSLTHDFPIFKCNCLY 297 Query: 298 HRKDAIFPATIIGKPRQEDYYLREYIQRLLAPVYPLLMPSVKALWEYSECGPHSLVSAVV 357 H+KDAI+PAT++GKP QED++L +Q LL+P++PL+MP V+ L Y E G H+L +A+V Sbjct: 298 HKKDAIYPATVVGKPFQEDFFLGNKLQELLSPLFPLIMPGVQDLKSYGEAGFHALAAAIV 357 Query: 358 RESYPREAVVSAYRILGEGQLSLTKFLLLTNEPVELAEFPKLLESVLERFNPASDFLVYG 417 +E Y +EA+ SA RILGEGQLSLTKFL +T++ V+L FP LLE VLER N D L+ Sbjct: 358 KERYWKEALRSALRILGEGQLSLTKFLWITDQSVDLENFPSLLECVLERMNFDRDLLILS 417 Query: 418 NAAPDEQDHSPNAMNPGSKAIMLGVGNPVRELPSAYTEGLLPGITEAIPYCRGCLAVSGA 477 A D D++ + N GSK I LGVG P+R LP Y LPGI++ +CRGCL + + Sbjct: 418 ETANDTLDYTGSGFNKGSKGIFLGVGAPIRSLPRRYRGPSLPGISQIGVFCRGCLVLETS 477 Query: 478 SYEEDPELPSRLIAALRAQETA-WPLVFVVDNAPDTVRTQTSFLWTVFTRFDPASDIYAE 536 + D + A L+ A WPLV +V++ + + F+W FTR PA+D++ Sbjct: 478 LQQLD------IPALLKEPHLADWPLVILVEDLSSALSSTKEFIWRTFTRSSPATDLHIP 531 Query: 537 Y-EIKSHHIGYKLPLVIDARMKRDYPEELVPREDIVQRVDRNWNSYFP 583 +I +H + Y P++++A MK YP+E+ E V W+SYFP Sbjct: 532 VSQITNHKVSYTPPMILNALMKPPYPKEVEADEATQNLVSSRWHSYFP 579 >ref|NP_712508.1| conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] gb|AAN49526.1| conserved hypothetical protein [Leptospira interrogans serovar lai str. 56601] Length = 585 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/576 (40%), Positives = 350/576 (60%), Gaps = 11/576 (1%) Query: 3 QWIEQLRKDKDLAVIDAPVDPYLELAEIHRRVVREEGPALLFTNVKDTPFPVATNLFGTV 62 +++++L+ +L +I+ VDP LELAEI RRVV + GPA+LF NVK + F V TNL+G+ Sbjct: 8 EFVKELQIQNELLIIEEEVDPILELAEIQRRVVAKRGPAILFKNVKGSRFSVVTNLYGSE 67 Query: 63 RRANQAFGTRPEQLVKTLMGAMETLLPPTASGXXXXXXXXXXXXXVGTRNVPQGEAPVLG 122 RR AFG P + ++ + ++ +LPPT + VG + V G APVL Sbjct: 68 RRMKIAFGEEPVRFIRKIATTIQHILPPTPAKIWDLRNIAFQVLKVGLKRV--GSAPVLE 125 Query: 123 VCRSTEPLKELPRITGWQEEGGPSLTLPLVYTESITHPQNHNLGIYRVQIYDDSKAGVYW 182 + + L ELP + W ++GG +TLPLVYTES + NLG+YR+QIY + G++ Sbjct: 126 --NTLDSLYELPTLMSWPKDGGRFVTLPLVYTESPKTGKG-NLGMYRIQIYGPMETGMHI 182 Query: 183 QKHKGGGFHHREAEQLGEPLPVSVFLGGXXXXXXXXXXXVQERXXXXXXXXXXXXXXXQM 242 Q H+GGG H+ EAE+ G LPV ++ GG + E ++ Sbjct: 183 QIHRGGGNHYYEAEKEGHFLPVHIYAGGPPALTIAAVAPLPEEISELILASLLLGEKLKI 242 Query: 243 VKDP-MGGHQIPAEAEFAIRGLIAPHERRAEGPFGDHYGFYSAPLHFPVMHVQRIWHRKD 301 K+ + + A+A+F I+G+I P R+ EGPFGDHYG+Y+ +P++ V+RI+HRK+ Sbjct: 243 QKNTNVSPLPVVADADFLIQGVIPPKIRKPEGPFGDHYGYYALKHDYPIVQVKRIYHRKN 302 Query: 302 AIFPATIIGKPRQEDYYLREYIQRLLAPVYPLLMPSVKALWEYSECGPHSLVSAVVRESY 361 AI+PAT++G+P QED+++ EY+Q LL+P++P++MP+VK +W Y E G HSL +AVV+E Y Sbjct: 303 AIWPATVVGRPPQEDHWIAEYLQDLLSPLFPVVMPAVKKVWAYEESGVHSLAAAVVKERY 362 Query: 362 PREAVVSAYRILGEGQLSLTKFLLLTNEPVELAEFPKLLESVLERFNPASDFLVYGNAAP 421 EA A RILGEGQLSLTK L +T++ V+L F + +VLER NP +D ++ N + Sbjct: 363 QGEAFTGALRILGEGQLSLTKVLFITDQDVDLKNFRETFITVLERMNPITDLHIFANISQ 422 Query: 422 DEQDHSPNAMNPGSKAIMLGVGNPVRELPSAYTEGLLPGITE--AIPYCRGCLAVSGASY 479 D D++ A+N GSKAI LG G +L + + L + IPY G L VSG Y Sbjct: 423 DTLDYTGPAVNQGSKAIFLGSGKKKNDLKTQFKGKLSNSSFKNPKIPYP-GTLVVSGPKY 481 Query: 480 EEDPELPSRLIAALRAQETAWPLVFVVDNAPDTVRTQTSFLWTVFTRFDPASDIYAEYEI 539 + +P++L+ Q+ + VF+VD++ DT+R+ F+W+VFTRF+PA DIYA ++ Sbjct: 482 KLKDGVPAKLLKEKSIQD--FLFVFLVDDSEDTIRSDHDFIWSVFTRFEPAGDIYANTKL 539 Query: 540 KSHHIGYKLPLVIDARMKRDYPEELVPREDIVQRVD 575 +H + P+V+D RMK YP +++VD Sbjct: 540 IRNHPAFYPPIVVDCRMKTWYPPLTEADSKTIRKVD 575 >gb|AAS70210.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 585 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 233/576 (40%), Positives = 350/576 (60%), Gaps = 11/576 (1%) Query: 3 QWIEQLRKDKDLAVIDAPVDPYLELAEIHRRVVREEGPALLFTNVKDTPFPVATNLFGTV 62 +++++L+ +L +I+ VDP LELAEI RRVV + GPA+LF NVK + F V TNL+G+ Sbjct: 8 EFVKELQIQNELLIIEEEVDPILELAEIQRRVVAKRGPAILFKNVKGSRFSVVTNLYGSE 67 Query: 63 RRANQAFGTRPEQLVKTLMGAMETLLPPTASGXXXXXXXXXXXXXVGTRNVPQGEAPVLG 122 RR AFG P + ++ + ++ +LPPT + VG + V G APVL Sbjct: 68 RRMKIAFGEEPVRFIRKIATTIQHILPPTPAKIWDLRNIAFQALKVGLKRV--GSAPVLE 125 Query: 123 VCRSTEPLKELPRITGWQEEGGPSLTLPLVYTESITHPQNHNLGIYRVQIYDDSKAGVYW 182 + + L ELP + W ++GG +TLPLVYTES + NLG+YR+QIY + G++ Sbjct: 126 --NTLDSLYELPTLMSWPKDGGRFVTLPLVYTESPKTGKG-NLGMYRIQIYGPMETGMHI 182 Query: 183 QKHKGGGFHHREAEQLGEPLPVSVFLGGXXXXXXXXXXXVQERXXXXXXXXXXXXXXXQM 242 Q H+GGG H+ EAE+ G LPV ++ GG + E ++ Sbjct: 183 QIHRGGGNHYYEAEKEGHFLPVHIYAGGPPALTIAAVAPLPEEISELILASLLLGEKLKI 242 Query: 243 VKDP-MGGHQIPAEAEFAIRGLIAPHERRAEGPFGDHYGFYSAPLHFPVMHVQRIWHRKD 301 K+ + + A+A+F I+G+I P R+ EGPFGDHYG+Y+ +P++ V+RI+HRK+ Sbjct: 243 QKNTNVSPLPVVADADFLIQGVIPPKIRKPEGPFGDHYGYYALKHDYPIVQVKRIYHRKN 302 Query: 302 AIFPATIIGKPRQEDYYLREYIQRLLAPVYPLLMPSVKALWEYSECGPHSLVSAVVRESY 361 AI+PAT++G+P QED+++ EY+Q LL+P++P++MP+VK +W Y E G HSL +AVV+E Y Sbjct: 303 AIWPATVVGRPPQEDHWIAEYLQDLLSPLFPVVMPAVKKVWAYEESGVHSLAAAVVKERY 362 Query: 362 PREAVVSAYRILGEGQLSLTKFLLLTNEPVELAEFPKLLESVLERFNPASDFLVYGNAAP 421 EA A RILGEGQLSLTK LL+T++ V+L F + +VLER NP +D ++ N + Sbjct: 363 QGEAFTGALRILGEGQLSLTKVLLITDQDVDLKNFRETFITVLERMNPITDLHIFANISQ 422 Query: 422 DEQDHSPNAMNPGSKAIMLGVGNPVRELPSAYTEGLLPGITE--AIPYCRGCLAVSGASY 479 D D++ +N GSKAI LG G +L + + L + IPY G L VSG Y Sbjct: 423 DTLDYTGPTVNQGSKAIFLGSGKKKNDLKTQFKGKLSNSSFKNPKIPYP-GTLVVSGPKY 481 Query: 480 EEDPELPSRLIAALRAQETAWPLVFVVDNAPDTVRTQTSFLWTVFTRFDPASDIYAEYEI 539 + +P++L+ Q+ + VF+VD++ DT+R+ F+W+VFTRF+PA DIYA ++ Sbjct: 482 KLKDGVPAKLLKEKFIQD--FLFVFLVDDSEDTIRSDHDFIWSVFTRFEPAGDIYANTKL 539 Query: 540 KSHHIGYKLPLVIDARMKRDYPEELVPREDIVQRVD 575 +H + P+V+D RMK YP +++VD Sbjct: 540 IRNHPAFYPPIVVDCRMKTWYPPLTEADSKTIRKVD 575 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.138 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 876,813,813 Number of extensions: 37128982 Number of successful extensions: 65213 Number of sequences better than 1.0e-05: 188 Number of HSP's gapped: 64852 Number of HSP's successfully gapped: 246 Length of query: 584 Length of database: 757,237,578 Length adjustment: 131 Effective length of query: 453 Effective length of database: 401,559,609 Effective search space: 181906502877 Effective search space used: 181906502877 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)