BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0101.0019.p (614 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00180609.1| hypothetical protein Mther141101 [Moorella th... 785 0.0 ref|ZP_00061682.1| COG0367: Asparagine synthase (glutamine-hydro... 746 0.0 ref|NP_622470.1| Asparagine synthase (glutamine-hydrolyzing) [Th... 715 0.0 ref|NP_977580.1| asparagine synthetase, glutamine-hydrolyzing [B... 681 0.0 ref|NP_242374.1| asparagine synthetase [Bacillus halodurans] >gi... 669 0.0 >ref|ZP_00180609.1| hypothetical protein Mther141101 [Moorella thermoacetica ATCC 39073] Length = 613 Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/613 (59%), Positives = 459/613 (74%), Gaps = 1/613 (0%) Query: 1 MCGITGFIQWRGDLTQHSQLLVKMTETLETRGPDAAGTWISGPCAFGHRRLSVIDPENGA 60 MCGITG++ W DLT +L MT TL RGPDAAGTW++ A GHRRL V+DP G Sbjct: 1 MCGITGWVDWELDLTGQKNILEAMTATLACRGPDAAGTWVAPRVALGHRRLVVVDPAGGG 60 Query: 61 QPMIARHDDKVYAIVYNGELYNAPELKVELQQRGHYFLTECDTEVLLHAYIEWGPDCTEK 120 QPM+ R ++ + + YNGELYN E++ EL RG+ F DTEVLL AY+EWG +C + Sbjct: 61 QPMVRRRGNQTFVLTYNGELYNTGEIREELLSRGYTFRGHSDTEVLLTAYMEWGVECVRR 120 Query: 121 LNGIFAFAVWDSLRDQVFLARDRLGVKPLFYSQVDDVFVFGSEPKALLQHPKVKPNVGPE 180 NGIFAFA+WD R+++FLARDRLGVKPLFY+ + F+FGSE KALL HP +KP V E Sbjct: 121 FNGIFAFAIWDEARERLFLARDRLGVKPLFYATLPHSFLFGSELKALLAHPAIKPEVDAE 180 Query: 181 GLAEVFIIGPARTPGHGVYKDIFELRPGHAMIYSRNGIRKYAYWELESYNHTDNVDETAA 240 GLAEVF++GPARTPGHGV+ ++ EL+PG+ M Y R G+R + YW L+S+ HTDN++ T A Sbjct: 181 GLAEVFVLGPARTPGHGVFHNLAELKPGYYMTYDRQGLRLHQYWALQSHPHTDNLETTIA 240 Query: 241 KVRDLLQDTLERQLVSDVPVCXXXXXXXXXXXXXXXXVDYYNRTGQGQVNTYSVDYIDND 300 KVR LLQDT+ERQLV+DVPVC + GQG ++T+SVDYIDND Sbjct: 241 KVRQLLQDTVERQLVADVPVCTLLSGGLDSSAVTVFAARAFQGRGQGHIHTWSVDYIDND 300 Query: 301 KHFKSHSFQPGADGPWIKRMVDELKTNHHYVAFDTPELVTALDNALYSRDLPGMTDVDSS 360 ++F+ FQP D PW+K + + L+T HHYV DTPELV +L A+ +RDLPGM DVDSS Sbjct: 301 RYFQPSHFQPNPDAPWVKLVSEHLETIHHYVYIDTPELVDSLKAAMRARDLPGMADVDSS 360 Query: 361 LYLFCREIKKNATVAISGEAADEIFGGYPWFHREEMLSSGTFPWSVAPKMRAELLSPEIR 420 L LFCRE+K+ ATVA+SGEAADE+FGGYPWF E+ L++ TFPW+ A + R LLSPE++ Sbjct: 361 LLLFCREVKREATVALSGEAADEVFGGYPWFRSEKALAANTFPWNRAGQERIRLLSPELK 420 Query: 421 EWIRPLEYLGDRYSDAVAEVPKLDGETGKQAQMRVMSYLNITRFMPTLLDRKDRMSMGVG 480 +RP EY+ RY +A+AEVP L GE + A++R +SYL++TRFMP LLDRKDRMSM VG Sbjct: 421 AMVRPEEYVARRYREALAEVPALPGEEARAARLREISYLSLTRFMPVLLDRKDRMSMAVG 480 Query: 481 LEVRVPYCDHRLVQYVFNIPWEIKTVGNREKGILRKALEGILPDDVLYRKKSPYPKTHNP 540 LEVRVPYCDHRLV+YV+NIPWE+K VG EKGILR+AL GILP +V+ R+KSPYPKT+NP Sbjct: 481 LEVRVPYCDHRLVEYVWNIPWEMKFVGQMEKGILRRALAGILPAEVINRRKSPYPKTYNP 540 Query: 541 AYLNAVRTQMLNILDDSSSPILPLIDAAKIREIAASPESSSNLPWFGQLMSGPQLFAYLA 600 AYL AVR ML+IL D +SP+LP ID A ++ + S E NLPWFGQLMSGPQLFAYLA Sbjct: 541 AYLEAVRNWMLDILADPASPLLPFIDVAAVKALTQSRE-VFNLPWFGQLMSGPQLFAYLA 599 Query: 601 QVNLWLRKYNVSI 613 Q++ W+R+Y VS+ Sbjct: 600 QIDTWMREYGVSV 612 >ref|ZP_00061682.1| COG0367: Asparagine synthase (glutamine-hydrolyzing) [Clostridium thermocellum ATCC 27405] Length = 613 Score = 746 bits (1926), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/613 (56%), Positives = 441/613 (71%), Gaps = 1/613 (0%) Query: 1 MCGITGFIQWRGDLTQHSQLLVKMTETLETRGPDAAGTWISGPCAFGHRRLSVIDPENGA 60 MCGI G+I + DLT ++L M + L RGPDA+G+WIS H+RL V+DPE G Sbjct: 1 MCGIAGWINLKSDLTNQKEILNSMIDRLTPRGPDASGSWISPNALIAHKRLIVVDPEGGI 60 Query: 61 QPMIARHDDKVYAIVYNGELYNAPELKVELQQRGHYFLTECDTEVLLHAYIEWGPDCTEK 120 QPM+ R + Y I YNGELYN +L+ EL+ RGH FLT DTEVLL +YIEWG C E Sbjct: 61 QPMVRRQGENTYVITYNGELYNTADLRNELESRGHEFLTSSDTEVLLVSYIEWGAKCVEH 120 Query: 121 LNGIFAFAVWDSLRDQVFLARDRLGVKPLFYSQVDDVFVFGSEPKALLQHPKVKPNVGPE 180 LNGI+AF +WD + ++FL RDR GVKPLFY+Q D +FGSE KALL +P V+P + E Sbjct: 121 LNGIYAFGIWDEGKKRLFLGRDRFGVKPLFYAQRGDSLIFGSELKALLANPLVEPKLDAE 180 Query: 181 GLAEVFIIGPARTPGHGVYKDIFELRPGHAMIYSRNGIRKYAYWELESYNHTDNVDETAA 240 GLAE+F +GPARTPGHG++KD++EL+P H+MI+ NGI+ YW LESY HTD+ T + Sbjct: 181 GLAEIFALGPARTPGHGIFKDVYELKPAHSMIFDINGIQIRKYWSLESYPHTDSEKATIS 240 Query: 241 KVRDLLQDTLERQLVSDVPVCXXXXXXXXXXXXXXXXVDYYNRTGQGQVNTYSVDYIDND 300 KVRD + D + RQLV+DVPVC + G+GQ+NT+SVDY+DND Sbjct: 241 KVRDFVLDAITRQLVADVPVCTFLSGGLDSSAITAVASKTFASQGKGQLNTFSVDYVDND 300 Query: 301 KHFKSHSFQPGADGPWIKRMVDELKTNHHYVAFDTPELVTALDNALYSRDLPGMTDVDSS 360 +FK FQP +D PWIK+M + T HHYV FDTP+LV AL +A+ +RDLPGM D+DSS Sbjct: 301 IYFKPSMFQPNSDEPWIKKMSESFNTCHHYVKFDTPQLVDALIDAVKARDLPGMADIDSS 360 Query: 361 LYLFCREIKKNATVAISGEAADEIFGGYPWFHREEMLSSGTFPWSVAPKMRAELLSPEIR 420 L+LFCRE+KK + VA+SGE ADEIFGGYPWFH E+ML + TFPWSV+ R ++LSPEI Sbjct: 361 LFLFCREVKKFSVVALSGECADEIFGGYPWFHNEKMLFADTFPWSVSVHERTKILSPEIL 420 Query: 421 EWIRPLEYLGDRYSDAVAEVPKLDGETGKQAQMRVMSYLNITRFMPTLLDRKDRMSMGVG 480 I+P EY+ RY + ++EVP L GE +A+ R + YLNI FM TLLDRKDRMSM G Sbjct: 421 NLIKPEEYIQRRYRETLSEVPHLKGENRIEARRREIFYLNINWFMATLLDRKDRMSMASG 480 Query: 481 LEVRVPYCDHRLVQYVFNIPWEIKTVGNREKGILRKALEGILPDDVLYRKKSPYPKTHNP 540 LEVRVP+CDHRLVQYV+NIPWE+K REKG+LR+AL+GILPDD++ RKKSPYPKTHNP Sbjct: 481 LEVRVPFCDHRLVQYVWNIPWELKMYNKREKGLLRQALKGILPDDIIERKKSPYPKTHNP 540 Query: 541 AYLNAVRTQMLNILDDSSSPILPLIDAAKIREIAASPESSSNLPWFGQLMSGPQLFAYLA 600 +Y AV +L IL+DSSSP+ LID +R +A +++ PWFGQLM+ PQ+ AYL Sbjct: 541 SYKKAVSKWLLEILNDSSSPLHQLIDVKVVRSMAEGNSDNTD-PWFGQLMAQPQMLAYLI 599 Query: 601 QVNLWLRKYNVSI 613 QV+ WLR ++SI Sbjct: 600 QVDFWLRDNHISI 612 >ref|NP_622470.1| Asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter tengcongensis] gb|AAM24074.1| Asparagine synthase (glutamine-hydrolyzing) [Thermoanaerobacter tengcongensis] Length = 613 Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/613 (53%), Positives = 444/613 (72%), Gaps = 1/613 (0%) Query: 1 MCGITGFIQWRGDLTQHSQLLVKMTETLETRGPDAAGTWISGPCAFGHRRLSVIDPENGA 60 MCGI G++ + DL+ ++++ KMT+TL+ RGPD +G W+S C GHRRL VIDP+ G Sbjct: 1 MCGIAGWVNFNMDLSLQNEVIEKMTDTLKKRGPDGSGVWLSKHCVLGHRRLIVIDPQGGI 60 Query: 61 QPMIARHDDKVYAIVYNGELYNAPELKVELQQRGHYFLTECDTEVLLHAYIEWGPDCTEK 120 QPMI ++ +K + I++NGELYN ELK EL G+ F T DTE++L +YIEWGP C +K Sbjct: 61 QPMIKKYGEKNFVIIHNGELYNMDELKNELISLGYTFNTRSDTEIILTSYIEWGPLCVKK 120 Query: 121 LNGIFAFAVWDSLRDQVFLARDRLGVKPLFYSQVDDVFVFGSEPKALLQHPKVKPNVGPE 180 NGIFAFA+WD +++++F+ARD LG+KPLFY+ + +FGSE KA+L HP VKP + + Sbjct: 121 FNGIFAFAIWDEVQNRLFIARDHLGIKPLFYTIKNGSLIFGSEIKAILAHPHVKPEIDSQ 180 Query: 181 GLAEVFIIGPARTPGHGVYKDIFELRPGHAMIYSRNGIRKYAYWELESYNHTDNVDETAA 240 GLAE+F++GP+RTPG GV+KDI EL+ GH +I+++NG+ YW L+S H D++++TA Sbjct: 181 GLAEIFVMGPSRTPGCGVFKDIKELKAGHYLIFTKNGVNISKYWSLQSLPHEDSLEKTAE 240 Query: 241 KVRDLLQDTLERQLVSDVPVCXXXXXXXXXXXXXXXXVDYYNRTGQGQVNTYSVDYIDND 300 K+R LL+D+ RQLVSDVP+C + + G + TYSVDY+ ND Sbjct: 241 KIRYLLKDSSVRQLVSDVPLCSLLSGGLDSTAVSFFANEELKQKGHKLI-TYSVDYVGND 299 Query: 301 KHFKSHSFQPGADGPWIKRMVDELKTNHHYVAFDTPELVTALDNALYSRDLPGMTDVDSS 360 K+F + FQP +D W+K + ++L T+H+YV D EL AL ALY+RDLPGM D+DSS Sbjct: 300 KYFTPNEFQPNSDADWVKFVANKLDTDHNYVFIDNEELAHALKPALYARDLPGMADIDSS 359 Query: 361 LYLFCREIKKNATVAISGEAADEIFGGYPWFHREEMLSSGTFPWSVAPKMRAELLSPEIR 420 LYLF +E+KK ATVA+SGE ADE+FGGYPWF +E + S TFPW+ R +LL PE+ Sbjct: 360 LYLFLKEVKKGATVALSGEGADEVFGGYPWFRNKESIRSHTFPWTRMVNERMKLLLPEVV 419 Query: 421 EWIRPLEYLGDRYSDAVAEVPKLDGETGKQAQMRVMSYLNITRFMPTLLDRKDRMSMGVG 480 +IRPLEYL DRY++A+ EVPKL+GE A+MR M YLNITRFMP LLDR DRMSM VG Sbjct: 420 NYIRPLEYLNDRYNEALNEVPKLNGEDPYNARMREMFYLNITRFMPMLLDRMDRMSMAVG 479 Query: 481 LEVRVPYCDHRLVQYVFNIPWEIKTVGNREKGILRKALEGILPDDVLYRKKSPYPKTHNP 540 LE RVP+ D+RLV+YV+NIPWE+K + NREKGILR AL+G +PD+V+ RKKSPYPKTHNP Sbjct: 480 LEARVPFLDYRLVEYVWNIPWEMKNLNNREKGILRYALKGYIPDEVIERKKSPYPKTHNP 539 Query: 541 AYLNAVRTQMLNILDDSSSPILPLIDAAKIREIAASPESSSNLPWFGQLMSGPQLFAYLA 600 + N V+ + I++DS+SP+L L+D I E+ + + + WF QLM PQLFAYL Sbjct: 540 VFKNIVKKWLKQIINDSTSPLLQLVDKKAIAELIETDAKAYDPAWFSQLMGSPQLFAYLV 599 Query: 601 QVNLWLRKYNVSI 613 Q+N+WL+ Y +SI Sbjct: 600 QINMWLKDYKISI 612 >ref|NP_977580.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus ATCC 10987] gb|AAS40188.1| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus ATCC 10987] Length = 615 Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/613 (52%), Positives = 419/613 (68%) Query: 1 MCGITGFIQWRGDLTQHSQLLVKMTETLETRGPDAAGTWISGPCAFGHRRLSVIDPENGA 60 MCGITG++ ++ L ++ KM ETL RGPD WI G AFGH+RL V+DPE G Sbjct: 1 MCGITGWVDYKRSLEGERDVVTKMAETLAKRGPDDNKVWIKGNVAFGHKRLIVVDPEGGK 60 Query: 61 QPMIARHDDKVYAIVYNGELYNAPELKVELQQRGHYFLTECDTEVLLHAYIEWGPDCTEK 120 QPM + YAI YNGELYN +++ EL +RG+ F DTEVLL +Y+EW +C + Sbjct: 61 QPMTCLKGETNYAICYNGELYNTEDIRKELLRRGYTFKGHSDTEVLLASYMEWKEECVDH 120 Query: 121 LNGIFAFAVWDSLRDQVFLARDRLGVKPLFYSQVDDVFVFGSEPKALLQHPKVKPNVGPE 180 LNGI+AFAVWD ++QVF+ARDRLGVKPLFY +FGSE KA+L HP VK V E Sbjct: 121 LNGIYAFAVWDEQKEQVFIARDRLGVKPLFYKYDSGRLLFGSELKAILAHPDVKAEVTLE 180 Query: 181 GLAEVFIIGPARTPGHGVYKDIFELRPGHAMIYSRNGIRKYAYWELESYNHTDNVDETAA 240 GL+E+F +GP+RTPGHG+Y I ELRPGHAM +S+NG+ + YW +ES H D+ +ET Sbjct: 181 GLSEIFGLGPSRTPGHGIYAGIKELRPGHAMTFSKNGLCIWRYWNVESKKHEDSFEETVE 240 Query: 241 KVRDLLQDTLERQLVSDVPVCXXXXXXXXXXXXXXXXVDYYNRTGQGQVNTYSVDYIDND 300 K R LLQD + RQLVSDVP+C Y R+G+GQ++TYS+DY DND Sbjct: 241 KTRFLLQDAITRQLVSDVPLCTFLSGGVDSSAITAIAAKEYERSGKGQLHTYSIDYEDND 300 Query: 301 KHFKSHSFQPGADGPWIKRMVDELKTNHHYVAFDTPELVTALDNALYSRDLPGMTDVDSS 360 K+FK+++FQP +D P+I M + +T HH +L L A+ RDLPGM D+DSS Sbjct: 301 KYFKANAFQPNSDAPFIHLMTETFQTIHHRCVISNEQLAQYLTEAVLVRDLPGMADIDSS 360 Query: 361 LYLFCREIKKNATVAISGEAADEIFGGYPWFHREEMLSSGTFPWSVAPKMRAELLSPEIR 420 L FCREIK++ V +SGE ADEIFGGYPWF+RE+ L S FPW + + R +LL E R Sbjct: 361 LLWFCREIKQDFVVGLSGECADEIFGGYPWFYREDDLQSSAFPWMRSTEAREQLLKKEWR 420 Query: 421 EWIRPLEYLGDRYSDAVAEVPKLDGETGKQAQMRVMSYLNITRFMPTLLDRKDRMSMGVG 480 + +Y+ RY +++ EVP L+GE+ +A+ R + YLN+ FM TLLDRKDRMSMG Sbjct: 421 NKLNLQQYVQRRYEESIQEVPILEGESPIEAKRRQLFYLNMVWFMTTLLDRKDRMSMGAS 480 Query: 481 LEVRVPYCDHRLVQYVFNIPWEIKTVGNREKGILRKALEGILPDDVLYRKKSPYPKTHNP 540 LEVRVP+ DHRLV+Y +NIPWE+K NREKG+LRKALEG+LP+D+LYRKKSPYPKTHNP Sbjct: 481 LEVRVPFADHRLVEYAWNIPWEMKMYKNREKGLLRKALEGLLPNDILYRKKSPYPKTHNP 540 Query: 541 AYLNAVRTQMLNILDDSSSPILPLIDAAKIREIAASPESSSNLPWFGQLMSGPQLFAYLA 600 Y AV + ++L D S + L D ++ + S S+ PWFGQLM+GPQL A+LA Sbjct: 541 HYTKAVTVWLQDLLTDKGSILHELFDKEQLSGLIESGGSAFQTPWFGQLMTGPQLLAHLA 600 Query: 601 QVNLWLRKYNVSI 613 Q+++W ++Y V+I Sbjct: 601 QIHVWFKEYGVNI 613 >ref|NP_242374.1| asparagine synthetase [Bacillus halodurans] pir||D83838 asparagine synthetase BH1508 [imported] - Bacillus halodurans (strain C-125) dbj|BAB05227.1| asparagine synthetase [Bacillus halodurans] Length = 615 Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/613 (51%), Positives = 415/613 (67%) Query: 1 MCGITGFIQWRGDLTQHSQLLVKMTETLETRGPDAAGTWISGPCAFGHRRLSVIDPENGA 60 MCGITG++ WR +L ++ + +M ET RGPD W A GH RL V+DPE G Sbjct: 1 MCGITGWVDWRRNLQNETETIKQMAETQTHRGPDDLNVWTEKHAALGHSRLIVVDPEGGC 60 Query: 61 QPMIARHDDKVYAIVYNGELYNAPELKVELQQRGHYFLTECDTEVLLHAYIEWGPDCTEK 120 QPM+ + K Y IVYNGELYN +L+ EL +G+ F DTEVLL +YIEWG C EK Sbjct: 61 QPMMRERNGKRYTIVYNGELYNTEDLRKELIVKGYQFQGHSDTEVLLVSYIEWGYQCVEK 120 Query: 121 LNGIFAFAVWDSLRDQVFLARDRLGVKPLFYSQVDDVFVFGSEPKALLQHPKVKPNVGPE 180 NGIFAFA+W+ +F+ARDRLGVKPLFY+ +F +E KALL HP+++P + E Sbjct: 121 FNGIFAFAIWNDKDQSLFMARDRLGVKPLFYTVRHGFLLFATEIKALLAHPEIEPVLTEE 180 Query: 181 GLAEVFIIGPARTPGHGVYKDIFELRPGHAMIYSRNGIRKYAYWELESYNHTDNVDETAA 240 GL+EV +GP+R+PG+GV+ DI ELRP H + Y RNG + YW L+S H+++ ETAA Sbjct: 181 GLSEVLGLGPSRSPGNGVFDDIQELRPAHLLTYDRNGAKVSRYWRLKSMAHSEDAMETAA 240 Query: 241 KVRDLLQDTLERQLVSDVPVCXXXXXXXXXXXXXXXXVDYYNRTGQGQVNTYSVDYIDND 300 +RDLL+DT+ERQL +DVPV Y R G+G + TYS+DY +ND Sbjct: 241 HLRDLLEDTVERQLFADVPVGMFLSGGVDSSALTAIAALIYEREGKGLIRTYSIDYDEND 300 Query: 301 KHFKSHSFQPGADGPWIKRMVDELKTNHHYVAFDTPELVTALDNALYSRDLPGMTDVDSS 360 K+FK++ FQP ADGPW++++ +TNHH EL L A+ RDLPGM DVDSS Sbjct: 301 KYFKANDFQPNADGPWVEKVSTTFRTNHHNAVISIEELANQLKRAVELRDLPGMADVDSS 360 Query: 361 LYLFCREIKKNATVAISGEAADEIFGGYPWFHREEMLSSGTFPWSVAPKMRAELLSPEIR 420 LY FC++IKK+ TV +SGE ADEIFGGYPWFH+ E+++ FPW + R ELL R Sbjct: 361 LYWFCKQIKKDVTVGLSGECADEIFGGYPWFHKPEVMNFNGFPWMRSADERQELLHERWR 420 Query: 421 EWIRPLEYLGDRYSDAVAEVPKLDGETGKQAQMRVMSYLNITRFMPTLLDRKDRMSMGVG 480 + + +Y+ DRY + +AE P+ + +T ++A+ R +SYLN+ FM TLLDRKDRMSMG Sbjct: 421 QKLNLPKYVHDRYKETIAETPRFEEDTPEEARRREISYLNMVWFMTTLLDRKDRMSMGAS 480 Query: 481 LEVRVPYCDHRLVQYVFNIPWEIKTVGNREKGILRKALEGILPDDVLYRKKSPYPKTHNP 540 LEVRVP+ DHR+V+Y +NIPWEIK G REKGILRKALEGILPD+VLYRKKSPYPKTH+P Sbjct: 481 LEVRVPFSDHRIVEYAWNIPWEIKQFGGREKGILRKALEGILPDEVLYRKKSPYPKTHHP 540 Query: 541 AYLNAVRTQMLNILDDSSSPILPLIDAAKIREIAASPESSSNLPWFGQLMSGPQLFAYLA 600 Y V+ +M IL S SP+ +++ K++E+ + + P+FGQLM+GPQL A+ Sbjct: 541 KYTKMVQQEMERILGQSDSPLFDVVNRKKLKELTETGGKALTTPYFGQLMTGPQLLAHFI 600 Query: 601 QVNLWLRKYNVSI 613 Q+ WL+ YN+ + Sbjct: 601 QMEHWLKHYNIKL 613 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.320 0.138 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 947,056,809 Number of extensions: 40305308 Number of successful extensions: 82233 Number of sequences better than 1.0e-05: 718 Number of HSP's gapped: 81361 Number of HSP's successfully gapped: 785 Length of query: 614 Length of database: 757,237,578 Length adjustment: 132 Effective length of query: 482 Effective length of database: 398,844,510 Effective search space: 192243053820 Effective search space used: 192243053820 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)