BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0100.0006.p (172 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_833083.1| Ribosomal-protein-alanine acetyltransferase [Ba... 103 1e-21 ref|NP_979682.1| acetyltransferase, GNAT family [Bacillus cereus... 87 2e-16 ref|NP_845696.1| acetyltransferase, GNAT family [Bacillus anthra... 84 1e-15 ref|NP_657270.1| Acetyltransf, Acetyltransferase (GNAT) family [... 84 1e-15 ref|ZP_00182362.1| hypothetical protein Exigu232701 [Exiguobacte... 82 5e-15 >ref|NP_833083.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP10284.1| Ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579] Length = 155 Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 53/154 (34%), Positives = 94/154 (61%), Gaps = 4/154 (2%) Query: 17 MSIIIRLDLQNGDILSELWSLQHKAYRLEAERIGFHEIPPLLETRDMLSRSEECFYGSFD 76 MS+I++L+ + ++ + + +Q AY++EA+ + IP L +T + + E FYG F Sbjct: 1 MSMILKLNSTSFEVATSILQVQIPAYKVEADYLNSTAIPRLYDTVNDIQNCVETFYGYFS 60 Query: 77 DSGELMGAVA-VQEESPGQLTVTRMMVNPDFFRQGVAGRLLEYIFGQYPGMDQFIVSTGK 135 + +L+G ++ VQEE + + R++V+P+FF++G+A +LL YIF +P +IV TGK Sbjct: 61 E-NKLVGFISFVQEEK--LIDIHRLVVSPNFFQKGIATKLLIYIFNMFPSSMAYIVQTGK 117 Query: 136 LNEPAVALYTKHGFVPAGLEEVAPGVELIEFHRS 169 N PA+ LY KHGF+ + G+ L + ++ Sbjct: 118 ANTPAITLYKKHGFITVSDTILPDGMILTQLKKT 151 >ref|NP_979682.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] gb|AAS42290.1| acetyltransferase, GNAT family [Bacillus cereus ATCC 10987] Length = 153 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 2/119 (1%) Query: 32 SELWSLQHKAYRLEAERIGFHEIPPLLETRDMLSRSEECFYGSFDDSGELMGAVAVQEES 91 + + S+Q AY +EA+ I IP L +T + +E FYG F + L G ++ + E Sbjct: 14 TSILSIQIPAYEIEAKYINSTAIPRLYDTVPDIQSCDEIFYGYFYEDT-LAGFISFKIEK 72 Query: 92 PGQLTVTRMMVNPDFFRQGVAGRLLEYIFGQYPGMDQFIVSTGKLNEPAVALYTKHGFV 150 ++ + R++V+PD+F +G+A +LL Y+F + +IV TGK N PA++LY KHGF+ Sbjct: 73 -DEVDIHRLVVSPDYFHKGIATKLLLYVFDMFSPSKTYIVQTGKENTPALSLYKKHGFI 130 >ref|NP_845696.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] gb|AAP27182.1| acetyltransferase, GNAT family [Bacillus anthracis str. Ames] Length = 153 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 2/138 (1%) Query: 32 SELWSLQHKAYRLEAERIGFHEIPPLLETRDMLSRSEECFYGSFDDSGELMGAVAVQEES 91 + + ++Q AY +EA+ I IP L +T + +E FYG F + L G ++ + + Sbjct: 14 TSILNIQIPAYEIEAKYINSTAIPRLYDTIADIQSCDEIFYGYFYEDT-LAGFISFKIDK 72 Query: 92 PGQLTVTRMMVNPDFFRQGVAGRLLEYIFGQYPGMDQFIVSTGKLNEPAVALYTKHGFVP 151 ++ + R++V+PD F +G+A +LL YIF + +IV TGK N PA++LY KHGF+ Sbjct: 73 E-EVDIHRLVVSPDHFHKGIATKLLLYIFDMFSSSKTYIVQTGKENTPALSLYKKHGFIE 131 Query: 152 AGLEEVAPGVELIEFHRS 169 + GV L ++ Sbjct: 132 VQNIVLPDGVILTSLKKT 149 >ref|NP_657270.1| Acetyltransf, Acetyltransferase (GNAT) family [Bacillus anthracis A2012] Length = 153 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 4/139 (2%) Query: 32 SELWSLQHKAYRLEAERIGFHEIPPLLETRDMLSRSEECFYGSF-DDSGELMGAVAVQEE 90 + + ++Q AY +EA+ I IP L +T + +E FYG F +D+ + + +E Sbjct: 14 TSILNIQIPAYEIEAKYINSTAIPRLYDTIADIQSCDEIFYGYFYEDTLAXFISFKIDKE 73 Query: 91 SPGQLTVTRMMVNPDFFRQGVAGRLLEYIFGQYPGMDQFIVSTGKLNEPAVALYTKHGFV 150 ++ + R++V PD F +G+A +LL YIF + +IV TGK N PA++LY KHGF+ Sbjct: 74 ---EVDIHRLVVXPDHFHKGIATKLLLYIFDMFSSSKTYIVQTGKENTPALSLYKKHGFI 130 Query: 151 PAGLEEVAPGVELIEFHRS 169 + GV L ++ Sbjct: 131 EVQNIVLPDGVILTSLKKT 149 >ref|ZP_00182362.1| hypothetical protein Exigu232701 [Exiguobacterium sp. 255-15] Length = 143 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 9/119 (7%) Query: 33 ELWSLQHKAYRLEAERIGFHEIPPLLETRDMLSRSEECFYGSFDDSGELMGAVAVQEESP 92 EL+ LQ +AYR+EA+ IG PPLL++ L + Y + D L+GA+ V+ E Sbjct: 12 ELYRLQQQAYRVEADLIGATFFPPLLQSEAALHEEQPAGYITRLDE-RLVGALTVEGE-- 68 Query: 93 GQLTVTRMMVNPDFFRQGVAGRLLEYIFGQYPGMDQFIVSTGKLNEPAVALYTKHGFVP 151 T+TR++V+PD FRQG+A +L+ + ++ + IVST LNEPA+ LY + GF P Sbjct: 69 ---TITRLLVSPDSFRQGIATQLIRHTL-EHQALR--IVSTAALNEPAITLYRQFGFRP 121 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.140 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 261,036,522 Number of extensions: 10144363 Number of successful extensions: 19532 Number of sequences better than 1.0e-05: 8 Number of HSP's gapped: 19548 Number of HSP's successfully gapped: 8 Length of query: 172 Length of database: 757,237,578 Length adjustment: 117 Effective length of query: 55 Effective length of database: 439,570,995 Effective search space: 24176404725 Effective search space used: 24176404725 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 121 (51.2 bits)