BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0094.0001.p (633 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_388778.1| serine protein kinase [Bacillus subtilis] >gi|7... 907 0.0 ref|NP_976932.1| conserved hypothetical protein [Bacillus cereus... 902 0.0 ref|NP_241895.1| serine protein kinase [Bacillus halodurans] >gi... 901 0.0 ref|NP_830367.1| Serine protein kinase [Bacillus cereus ATCC 145... 899 0.0 ref|NP_654483.1| hypothetical protein predicted by GeneMark [Bac... 899 0.0 >ref|NP_388778.1| serine protein kinase [Bacillus subtilis] sp|P39134|PRKA_BACSU PrkA protein pir||JC4602 protein kinase (EC 2.7.1.37) A - Bacillus subtilis emb|CAA55933.1| prkA [Bacillus subtilis] emb|CAB12725.1| serine protein kinase [Bacillus subtilis subsp. subtilis str. 168] prf||2206362C Ser protein kinase Length = 631 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/633 (67%), Positives = 530/633 (83%), Gaps = 2/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M L+K+ YR++E L WEGTF DYL +++ENP +A +AH V+ MI+ +G+ ++ DGR Sbjct: 1 MDILKKIEKYREEEQRLKWEGTFADYLEIIKENPMVAQSAHSRVFNMIKDSGIEEI-DGR 59 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 ++Y FF LFGLE++++ LVEEYF PAA+RLDVRKR+LLLMGPVSGGKSTLVT++K GL Sbjct: 60 KKYSFFDRELFGLEESLERLVEEYFHPAAKRLDVRKRILLLMGPVSGGKSTLVTMLKKGL 119 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 EA+T T GA YAIKGCPM E+PLHLIP LR++F REYG+ IEG L P+ MRLE+E+G Sbjct: 120 EAYTLTDNGAVYAIKGCPMHEDPLHLIPHHLRDDFYREYGIRIEGSLSPLNVMRLEEEYG 179 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 GRIE++ V R+ FSE +RTGIGTF+PSDPKSQDIADLTGSIDFSTI +YGSESDPRAYRF Sbjct: 180 GRIEDVKVERIFFSEDKRTGIGTFSPSDPKSQDIADLTGSIDFSTIAEYGSESDPRAYRF 239 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRG+MEFQE+LKCDEKFLW+LLSLTQEGNFKAGRFALISADELI+AHTNETEY Sbjct: 240 DGELNKANRGMMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADELIVAHTNETEY 299 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 R+FISNKKNEALHSR+IVM +PYNL+ +EERIY K++ S + + VH+AP+ L A++F Sbjct: 300 RSFISNKKNEALHSRIIVMPVPYNLKVSEEERIYEKMIAESDVAD-VHIAPHTLKVAAMF 358 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 ++L+RLKEPKR +IDL+KKM LY +++E+ EGMSG+DPRYVINRI Sbjct: 359 SILTRLKEPKRSDIDLVKKMRLYDGESVEGYNSVDVEDMKKEYNDEGMSGIDPRYVINRI 418 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 SS +IR N IN+LDVLRSLKEGLDQH SIS E+RER +N I+ ARKEYD AK EVQ+ Sbjct: 419 SSTIIRKNMESINSLDVLRSLKEGLDQHPSISSEDRERYLNFISAARKEYDDIAKKEVQK 478 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+S+EESA+T+++NYLDNVEAYC+ K+RDP+T EE +PDEKLMRSIEEQIGI+EN K Sbjct: 479 AFVYSYEESAKTLMDNYLDNVEAYCNKNKLRDPLTGEEMNPDEKLMRSIEEQIGISENAK 538 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 +AFREEILI+IS +AR+G++F+Y SHE L++AI+KKLFADLKDV+KITTS+ PDE QLK Sbjct: 539 KAFREEILIRISAYARKGKRFDYNSHERLREAIQKKLFADLKDVVKITTSTKTPDEQQLK 598 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 ++NEV RLI+ +GY +T ANEL+KYVG LLNR Sbjct: 599 KVNEVVARLIDEHGYNSTSANELLKYVGSLLNR 631 >ref|NP_976932.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gb|AAS39540.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] Length = 631 Score = 902 bits (2331), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/633 (68%), Positives = 527/633 (83%), Gaps = 2/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M L+K+ +R+ E L WEGTF +YL LV+E P +A TAH +Y MI+ AG+ ++ DGR Sbjct: 1 MDILKKIEQHREAEERLQWEGTFAEYLELVKERPWVAQTAHSRIYNMIKDAGIEEV-DGR 59 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 R+Y FFS LFGLEDA++ LVEEYF P+A+RLDVRKR+LLLMGPVSGGKSTLVT++K GL Sbjct: 60 RKYNFFSNQLFGLEDALERLVEEYFHPSAKRLDVRKRILLLMGPVSGGKSTLVTMLKRGL 119 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 E ++RT GA +AIKGCPM E+PLHLIP LR++F EYGV IEG L P+ MRLEQE+G Sbjct: 120 ETYSRTDRGAIFAIKGCPMHEDPLHLIPHHLRDDFFDEYGVRIEGNLSPLNVMRLEQEYG 179 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 RIE++ V R+ FSE RTGIGTF+PSDPKSQDIADLTGS+DFSTI +YGSESDPRAYRF Sbjct: 180 SRIEDVVVERIFFSEDRRTGIGTFSPSDPKSQDIADLTGSLDFSTIAEYGSESDPRAYRF 239 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRG+MEFQE+LKCDEKFLW+LLSLTQEGNFKAGRFALISADELI+AHTNETEY Sbjct: 240 DGELNKANRGMMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADELIVAHTNETEY 299 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 R+FI+NKKNEALHSR+IVM +PYNL+ +EE IY K++ S ++N VH+AP+ L A++F Sbjct: 300 RSFIANKKNEALHSRIIVMPVPYNLRVSEEEHIYEKMIRESDVSN-VHIAPHTLRVAAMF 358 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 T+L+RLK+PKRP+IDLIKKM LY L+RE+ EGMSG+DPRYVINRI Sbjct: 359 TILTRLKDPKRPDIDLIKKMRLYDGETVEGYNAIDVEELQREYQDEGMSGIDPRYVINRI 418 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 SS +IR INALDVLRSLK+GLDQH SIS E+RER MN I+LARKEYD AK EVQ+ Sbjct: 419 SSTIIRKEVPSINALDVLRSLKDGLDQHPSISNEDRERYMNFISLARKEYDEIAKKEVQK 478 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+S+EESA+T+++NYLDNVEAYC+ K+RDP+T EE PDEKLMRSIEEQIGI+EN K Sbjct: 479 AFVYSYEESAKTLMDNYLDNVEAYCNKSKLRDPLTGEEMSPDEKLMRSIEEQIGISENAK 538 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 +AFREEILI+IS +AR+G++F+Y SHE L++AI+KKLFADLKD++KITTS+ PDENQLK Sbjct: 539 KAFREEILIRISAYARKGKRFDYNSHERLREAIQKKLFADLKDIVKITTSTKTPDENQLK 598 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 ++N+V RLI+ +GY ++ ANEL++YVG LLNR Sbjct: 599 KINDVVARLIDEHGYNSSSANELLRYVGSLLNR 631 >ref|NP_241895.1| serine protein kinase [Bacillus halodurans] pir||E83778 serine protein kinase prkA [imported] - Bacillus halodurans (strain C-125) dbj|BAB04748.1| serine protein kinase [Bacillus halodurans] Length = 631 Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/633 (67%), Positives = 529/633 (83%), Gaps = 2/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M L+K+ YR++E L WEGTF DYL L++E P +A TAH VY MI+ AG + DGR Sbjct: 1 MDILKKVEQYREEEERLKWEGTFADYLALLKEKPWVAQTAHARVYNMIKDAGFEE-KDGR 59 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 + Y FFS +FGLED+I+ LVEEYF AA+RLDVRKR+LLLMGPVSGGKST+VT++K GL Sbjct: 60 KTYSFFSDQIFGLEDSIEKLVEEYFHSAAKRLDVRKRILLLMGPVSGGKSTIVTMLKRGL 119 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 E ++RT GA YAIKGCPM E+PLHLIP+ LR +F EYG+ IEG L P+ MRL++E+G Sbjct: 120 ENYSRTERGAVYAIKGCPMHEDPLHLIPQHLRRDFYEEYGIRIEGNLSPLNMMRLQEEYG 179 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 GRIE++ V R+ FSE +R GIGTF+PSDPKSQDIADLTGSIDFSTI +YGSESDPRAYRF Sbjct: 180 GRIEDVIVERIFFSEDKRCGIGTFSPSDPKSQDIADLTGSIDFSTIAEYGSESDPRAYRF 239 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRGLMEFQE+LKCDEKFLW+LLSLTQEGNFKAGRFALISADE+I+AHTNE+EY Sbjct: 240 DGELNKANRGLMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADEMIVAHTNESEY 299 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 R+FI+NKKNEALHSR+IVM+IPYNL+ +EERIY K+++ S L+N VH+AP+AL A++F Sbjct: 300 RSFIANKKNEALHSRIIVMKIPYNLRVSEEERIYEKMIEDSDLSN-VHIAPHALKVAAIF 358 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 T+L+RLKEPK+ +DL+KKM LY LR+E+ EGMSG+DPRYVINRI Sbjct: 359 TILTRLKEPKKQGVDLLKKMRLYDGEAVEGYNVQDVEELRKEYEDEGMSGIDPRYVINRI 418 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 SSA+IR + I+ALDVLRS+KEGLDQHASISKE++ER M+ I +AR+EYD AK EVQ+ Sbjct: 419 SSAIIRKQLTSISALDVLRSIKEGLDQHASISKEDKERYMDFIAIARREYDDIAKKEVQK 478 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+S+EESA+T+++NYLDNVEAYC+ K+RDP+T EE PDEKLMRSIEEQIGI+EN K Sbjct: 479 AFVYSYEESAKTLMDNYLDNVEAYCNKSKLRDPLTGEEMQPDEKLMRSIEEQIGISENAK 538 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 +AFREEILI+IS +AR+G++F+Y SHE L++AI+KKLFADLKD++KITTS+ PDE+QLK Sbjct: 539 KAFREEILIRISAYARKGKKFDYNSHERLREAIQKKLFADLKDIVKITTSAKTPDESQLK 598 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 ++NEV RLI+ +GY + ANEL++YVG LLNR Sbjct: 599 KINEVIARLIDEHGYNSVSANELLRYVGSLLNR 631 >ref|NP_830367.1| Serine protein kinase [Bacillus cereus ATCC 14579] gb|AAP07568.1| Serine protein kinase [Bacillus cereus ATCC 14579] Length = 631 Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/633 (67%), Positives = 525/633 (82%), Gaps = 2/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M L+K+ +R E L WEGTF +YL LV+E P +A TAH +Y MI+ AG+ ++ DGR Sbjct: 1 MDILKKIEQHRAAEERLQWEGTFAEYLELVKERPWVAQTAHSRIYNMIKDAGIEEV-DGR 59 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 R+Y FFS LFGLEDA++ LVEEYF P+A+RLDVRKR+LLLMGPVSGGKSTLVT++K GL Sbjct: 60 RKYNFFSNQLFGLEDALERLVEEYFHPSAKRLDVRKRILLLMGPVSGGKSTLVTMLKRGL 119 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 E ++RT GA +AIKGCPM E+PLHLIP LR++F EYGV IEG L P+ MRLEQE+G Sbjct: 120 ETYSRTDRGAIFAIKGCPMHEDPLHLIPHHLRDDFFDEYGVRIEGNLSPLNVMRLEQEYG 179 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 RIE++ V R+ FSE RTGIGTF+PSDPKSQDIADLTGS+DFSTI +YGSESDPRAYRF Sbjct: 180 SRIEDVVVERIFFSEDRRTGIGTFSPSDPKSQDIADLTGSLDFSTIAEYGSESDPRAYRF 239 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRG+MEFQE+LKCDEKFLW+LLSLTQEGNFKAGRFALISADELI+AHTNETEY Sbjct: 240 DGELNKANRGMMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADELIVAHTNETEY 299 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 R+FI+NKKNEALHSR+IVM +PYNL+ +EE IY K++ S ++N VH+AP+ L A++F Sbjct: 300 RSFIANKKNEALHSRIIVMPVPYNLRVSEEEHIYEKMIRESDVSN-VHIAPHTLRVAAMF 358 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 T+L+RLK+PKRP+IDLIKKM LY L+RE+ EGM G+DPRYVINRI Sbjct: 359 TILTRLKDPKRPDIDLIKKMRLYDGETVEGYNAIDVEELQREYQDEGMKGIDPRYVINRI 418 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 SS +IR INALDVLRSLK+GLDQH SIS E+RER MN I+LARKEYD AK EVQ+ Sbjct: 419 SSTIIRKEVPSINALDVLRSLKDGLDQHPSISNEDRERYMNFISLARKEYDEIAKKEVQK 478 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+S+EESA+T+++NYLDNVEAYC+ K+RDP+T EE PDEKLMRSIEEQIGI+EN K Sbjct: 479 AFVYSYEESAKTLMDNYLDNVEAYCNKSKLRDPLTGEEMSPDEKLMRSIEEQIGISENAK 538 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 +AFREEILI+IS +AR+G++F+Y SHE L++AI+KKLFADLKD++KITTS+ PDENQLK Sbjct: 539 KAFREEILIRISAYARKGKRFDYNSHERLREAIQKKLFADLKDIVKITTSTKTPDENQLK 598 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 ++N+V RLI+ +GY ++ ANEL++YVG LLNR Sbjct: 599 KINDVVARLIDEHGYNSSSANELLRYVGSLLNR 631 >ref|NP_654483.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] ref|NP_843085.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gb|AAP24571.1| conserved hypothetical protein [Bacillus anthracis str. Ames] Length = 631 Score = 899 bits (2322), Expect = 0.0, Method: Compositional matrix adjust. Identities = 429/633 (67%), Positives = 526/633 (83%), Gaps = 2/633 (0%) Query: 1 MTFLEKLLTYRDKENDLFWEGTFLDYLGLVRENPQIAGTAHELVYRMIESAGVNDLGDGR 60 M L+K+ +R+ E L WEGTF +YL LV+E P +A TAH +Y MI+ AG+ ++ DGR Sbjct: 1 MDILKKIEQHREAEERLQWEGTFAEYLELVKERPWVAQTAHSRIYNMIKDAGIEEV-DGR 59 Query: 61 REYKFFSGTLFGLEDAIQLLVEEYFRPAAQRLDVRKRLLLLMGPVSGGKSTLVTLMKNGL 120 R+Y FFS LFGLEDA++ LVEEYF P+A+RLDVRKR+LLLMGPVSGGKSTLVT++K GL Sbjct: 60 RKYNFFSNQLFGLEDALERLVEEYFHPSAKRLDVRKRILLLMGPVSGGKSTLVTMLKRGL 119 Query: 121 EAFTRTPEGAQYAIKGCPMQEEPLHLIPRELREEFRREYGVHIEGELCPVCRMRLEQEHG 180 E ++RT GA +AIKGCPM E+PLHLIP LR++F EYGV IEG L P+ MRLEQE+G Sbjct: 120 ETYSRTDRGAIFAIKGCPMHEDPLHLIPHHLRDDFFDEYGVRIEGNLSPLNVMRLEQEYG 179 Query: 181 GRIEEMPVVRVLFSESERTGIGTFAPSDPKSQDIADLTGSIDFSTITQYGSESDPRAYRF 240 RIE++ V R+ FSE RTGIGTF+PSDPKSQDIADLTGS+DFSTI +YGSESDPRAYRF Sbjct: 180 SRIEDVVVERIFFSEDRRTGIGTFSPSDPKSQDIADLTGSLDFSTIAEYGSESDPRAYRF 239 Query: 241 DGELNKANRGLMEFQEILKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNETEY 300 DGELNKANRG+MEFQE+LKCDEKFLW+LLSLTQEGNFKAGRFALISADELI+AHTNETEY Sbjct: 240 DGELNKANRGMMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADELIVAHTNETEY 299 Query: 301 RAFISNKKNEALHSRMIVMRIPYNLQARQEERIYRKLVDASGLNNQVHLAPNALWTASVF 360 R+FI+NKKNEALHSR+IVM +PYNL+ +EE IY K++ S +++ VH+AP+ L A++F Sbjct: 300 RSFIANKKNEALHSRIIVMPVPYNLRVSEEEHIYEKMIRESDVSD-VHIAPHTLRVAAMF 358 Query: 361 TVLSRLKEPKRPEIDLIKKMYLYXXXXXXXXXXXXXXXLRREHPGEGMSGVDPRYVINRI 420 T+L+RLK+PKRP+IDLIKKM LY L+RE+ EGM G+DPRYVINRI Sbjct: 359 TILTRLKDPKRPDIDLIKKMRLYDGETVEGYNAIDVEELQREYQDEGMKGIDPRYVINRI 418 Query: 421 SSALIRGNKSCINALDVLRSLKEGLDQHASISKEERERLMNLITLARKEYDHKAKTEVQR 480 SS +IR INALDVLRSLK+GLDQH SIS E+RER MN I+LARKEYD AK EVQ+ Sbjct: 419 SSTIIRKEVPSINALDVLRSLKDGLDQHPSISNEDRERYMNFISLARKEYDEIAKKEVQK 478 Query: 481 AFVFSFEESARTILNNYLDNVEAYCSGYKMRDPITSEEGDPDEKLMRSIEEQIGITENQK 540 AFV+S+EESA+T+++NYLDNVEAYC+ K+RDP+T EE PDEKLMRSIEEQIGI+EN K Sbjct: 479 AFVYSYEESAKTLMDNYLDNVEAYCNKSKLRDPLTGEEMSPDEKLMRSIEEQIGISENAK 538 Query: 541 RAFREEILIKISTFARRGRQFEYTSHEPLKDAIEKKLFADLKDVIKITTSSMNPDENQLK 600 +AFREEILI+IS +AR+G++F+Y SHE L++AI+KKLFADLKD++KITTS+ PDENQLK Sbjct: 539 KAFREEILIRISAYARKGKRFDYNSHERLREAIQKKLFADLKDIVKITTSTKTPDENQLK 598 Query: 601 RMNEVSRRLIEHNGYCATCANELMKYVGGLLNR 633 ++N+V RLI+ +GY ++ ANEL++YVG LLNR Sbjct: 599 KINDVVARLIDEHGYNSSSANELLRYVGSLLNR 631 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.136 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 885,816,108 Number of extensions: 36143585 Number of successful extensions: 104156 Number of sequences better than 1.0e-05: 63 Number of HSP's gapped: 103847 Number of HSP's successfully gapped: 64 Length of query: 633 Length of database: 757,237,578 Length adjustment: 132 Effective length of query: 501 Effective length of database: 398,844,510 Effective search space: 199821099510 Effective search space used: 199821099510 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)