BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0081.0028.p (930 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_682702.1| phosphoenolpyruvate carboxylase [Thermosynechoc... 602 e-170 ref|NP_520479.1| PROBABLE PHOSPHOENOLPYRUVATE CARBOXYLASE PROTEI... 602 e-170 ref|ZP_00171283.1| hypothetical protein Raeut258501 [Ralstonia e... 592 e-167 ref|NP_840673.1| Phosphoenolpyruvate carboxylase [Nitrosomonas e... 590 e-167 ref|NP_923360.1| phosphoenolpyruvate carboxylase [Gloeobacter vi... 587 e-166 >ref|NP_682702.1| phosphoenolpyruvate carboxylase [Thermosynechococcus elongatus BP-1] sp|Q94QB2|CAPP_SYNEL Phosphoenolpyruvate carboxylase (PEPCase) (PEPC) dbj|BAB64533.1| phosphoenolpyruvate carboxylase [Thermosynechococcus vulcanus] dbj|BAC09464.1| phosphoenolpyruvate carboxylase [Thermosynechococcus elongatus BP-1] Length = 1011 Score = 602 bits (1552), Expect = e-170, Method: Compositional matrix adjust. Identities = 367/1009 (36%), Positives = 551/1009 (54%), Gaps = 100/1009 (9%) Query: 9 SKSNSNNLLRRDVRFLGNILGEVLVHQGGNELLEIVEKIRE-TSKSLRSLFLPELHNEFK 67 S+S + L+ +R + +L +VL + G EL++++ ++ +S L PE E Sbjct: 16 SESLAARTLQERLRLVEEVLVDVLAAESGQELVDLLRRLGALSSPEGHVLHAPE--GELL 73 Query: 68 ELINSLDPENRHQVIRAFAIYFQLVNIAEQNHRIRRKRDYERSAGE-------------- 113 ++I SL+ + RAF +YFQ++NI EQ++ + R ER+A E Sbjct: 74 KVIESLELNEAIRAARAFNLYFQIINIVEQHYEQQYNR--ERAAQEGLRRRSVMSEPISG 131 Query: 114 ------------------------------------TVQPGSIESAIQELRERDFSHEDV 137 T Q GS L+ + + Sbjct: 132 VSGEGFPLPHTAANATDVRSGPSERLEHSLYEAIPATQQYGSFAWLFPRLQMLNVPPRHI 191 Query: 138 HEIMNGLSLELVMTAHPTEAMRRAILDIHKRISD-----DVMGLDNPTLTFREREQLREK 192 ++++ L ++LV TAHPTE +R+ I D +R++ DV+ +P LT + LR + Sbjct: 192 QKLLDQLDIKLVFTAHPTEIVRQTIRDKQRRVARLLEQLDVLEGASPHLTDWNAQTLRAQ 251 Query: 193 LLNEVITLWQTDELRDRKPTVLDEVRNGMYYFHETIFQVLPDVYQELERCLSKYYPGQNW 252 L+ E+ W+TDEL KP VLDEV ++YF E IF V+P +Y+ LE+ L + +P Sbjct: 252 LMEEIRLWWRTDELHQFKPEVLDEVEYTLHYFKEVIFAVIPKLYRRLEQSLHETFPALQP 311 Query: 253 HVPTYLRFGSWIGGDRDGNPSVTAAVTLQTLRLQRKLAIREYQRIMRELMQYLSFSTSIV 312 + RFGSW+GGDRDGNP V VT QT QR L + EY + + L+ LS S Sbjct: 312 PRHRFCRFGSWVGGDRDGNPYVKPEVTWQTACYQRNLVLEEYIKSVERLINLLSLSLHWC 371 Query: 313 KVTPELLQSIESD-RDIIQLDKAKSWHNDNEPYRIKLAYMIAKTQNVMD----------- 360 V P+LL S+E D R + + + + EPYR+KLAY++ + QN D Sbjct: 372 DVLPDLLDSLEQDQRQLPSIYEQYAVRYRQEPYRLKLAYVLKRLQNTRDRNRALQTYCIR 431 Query: 361 ---DEKKGTPERYASPEQFIDDLNVIDRSLRHHYADYVADTYIKKLIRQVELFGFHTATL 417 E+ + Y E+F+ +L +I R+L+ +A + LI QVE+FGF+ A L Sbjct: 432 RNEAEELNNGQFYRHGEEFLAELLLIQRNLKE---TGLACRELDDLICQVEVFGFNLAAL 488 Query: 418 DVRQHSQEHENAMTEILAKMNVTQ-DYAKLQENEKIGLLEKLLNDPRPLTSPYQTYSEST 476 D+RQ S H A+ EI A + + Y +L E E+ L L+ RPL +S+ T Sbjct: 489 DIRQESTCHAEALNEITAYLGILPCPYTELSEAERTRWLLSELSTRRPLIPGELPFSDRT 548 Query: 477 EECLAVYRAIFTAQEEYGKQCITSYLISMAEAASDILEVMVFSKEVGLFRKDNDGTVVCT 536 E + +R + Q+E+G +Y+ISM+ SD+LEV++F+KE GLF + T T Sbjct: 549 NEIIETFRMVRQLQQEFGTDLCNTYIISMSHEVSDLLEVLLFAKEAGLF---DPATGAST 605 Query: 537 LQAVPLFETIDDLHNAPQIMRTLLNLPIYRDAVRAMND--LQEIMLGYSDSNKDGGVVTA 594 LQA+PLFET++DL +AP ++ L +LP R + + + LQE+MLGYSDSNKD G +++ Sbjct: 606 LQAIPLFETVEDLKHAPAVLTQLFSLPFCRSYLGSNSTPFLQEVMLGYSDSNKDSGFLSS 665 Query: 595 NYELRVALKEITTTADEFGIKLKFFHXXXXXXXXXXMPLNRSILAQPASTIGGGIKITEQ 654 N+E+ A +++ A+ FG +L+ FH P +ILAQPA TI G IKITEQ Sbjct: 666 NWEIYKAQQQLQKIAESFGFQLRIFHGRGGSVGRGGGPAYAAILAQPAQTIKGRIKITEQ 725 Query: 655 GEVISSRYSMQGIAYRSLEQATSALITAAINARSPQADLYDPKWEEIVARISEVSLSKYQ 714 GEV++S+YS+ +A +LE +A+I A++ S D +P W EI+ ++ S Y+ Sbjct: 726 GEVLASKYSLPELALFNLETVATAVIQASLLRSS--IDEIEP-WHEIMEELATRSRQCYR 782 Query: 715 DLIFRDPDFLNYFKESTPLPEVGELNIGSRPSKRKNSDRFEDLRAIPWVFAWTQSRYLLP 774 LI+ P+F+ +F E TP+ E+ +L I SRP++R E LRAIPWVF+WTQ+R+LLP Sbjct: 783 HLIYEQPEFIEFFNEVTPIQEISQLQISSRPTRRGGKKTLESLRAIPWVFSWTQTRFLLP 842 Query: 775 AWYAAGTGLQSFYDDK-EENLKIMQHMYEKFSFFTTLIDTLQMAIAKADLIIAKEYA--- 830 AWY GT L+ F ++K E+L ++++ Y K+ FF +I ++M +AK DL IA+ Y Sbjct: 843 AWYGVGTALKEFLEEKPAEHLSLLRYFYYKWPFFRMVISKVEMTLAKVDLEIARYYVQEL 902 Query: 831 GMGKNEEARQRIFGQIEAEFKLTSELILKITGQQDILDNVPVIQESIRLRNPYVDPLSYL 890 +N EA R++ QI E++LT+EL+L ITG + +LD P +Q S++LRN + PL +L Sbjct: 903 SQPQNREAFCRLYDQIAQEYRLTTELVLTITGHERLLDGDPALQRSVQLRNRTIVPLGFL 962 Query: 891 QVQXXXXXXXXXXXXGDDA---------ELLREVLLTINGIAAGLRNTG 930 QV A ELLR LLTINGIAAG+RNTG Sbjct: 963 QVSLLKRLRQHNSQTTSGAILRSRYGRGELLRGALLTINGIAAGMRNTG 1011 >ref|NP_520479.1| PROBABLE PHOSPHOENOLPYRUVATE CARBOXYLASE PROTEIN [Ralstonia solanacearum] sp|Q8XWW2|CAPP_RALSO Phosphoenolpyruvate carboxylase (PEPCase) (PEPC) emb|CAD16065.1| PROBABLE PHOSPHOENOLPYRUVATE CARBOXYLASE PROTEIN [Ralstonia solanacearum] Length = 985 Score = 602 bits (1551), Expect = e-170, Method: Compositional matrix adjust. Identities = 350/955 (36%), Positives = 528/955 (55%), Gaps = 38/955 (3%) Query: 2 TELTTAVSKSNSNNLLRRDVRFLGNILGEVLVHQGGNELLEIVEKIRETSKSLRSLFLPE 61 T ++ S + + L+ D+RFLG +LG+VL Q G E VE IR+T+ R + Sbjct: 43 TSRRSSGSAAAKDQPLKEDIRFLGRLLGDVLREQEGAAAFETVETIRQTAVRFRRDGDRQ 102 Query: 62 LHNEFKELINSLDPENRHQVIRAFAIYFQLVNIAEQNHRIRRKRDYERSAGETVQPGSIE 121 E L+ +L + V+RAF+ + L NIAE H RR+R + AG + QPGS+ Sbjct: 103 AEQELDRLLKTLSRDQTTSVVRAFSYFSHLANIAEDQHHNRRRRVHA-LAGSSPQPGSLL 161 Query: 122 SAIQELRERDFSHEDVHEIMNGLSLELVMTAHPTEAMRRAILDIHKRISDDVMGLDNPTL 181 A+ + S + + + + V+TAHPTE R++ILD + I+ + D P L Sbjct: 162 RALLSAADEGLSGDALRRFFDAALIVPVLTAHPTEVQRKSILDAQREIARLLAERDAP-L 220 Query: 182 TFREREQLREKLLNEVITLWQTDELRDRKPTVLDEVRNGMYYFHETIFQVLPDVYQELER 241 T RERE+ L V LWQT LR + V DE+ N + Y+ T + +P +Y+ELE Sbjct: 221 TVRERERNVTLLRAHVTKLWQTRMLRTTRLMVADEIENALSYYQTTFLREIPALYRELEE 280 Query: 242 CLSKYYP-----GQNWHVPTYLRFGSWIGGDRDGNPSVTAAVTLQTLRLQRKLAIREYQR 296 ++ +P G+ +P + + GSWIGGDRDGNP VTA + Q + + Y Sbjct: 281 DVATVFPRRGARGEPAPLPAFFQMGSWIGGDRDGNPFVTAQTLRHAAQRQASVILTWYLD 340 Query: 297 IMRELMQYLSFSTSIVKVTPELLQSIESDRDIIQLDKAKSWHNDNEPYRIKL----AYMI 352 + L LS ST +V V+ +LL E D S H +EPYR L A + Sbjct: 341 EIHALGAELSMSTLLVDVSADLLALAERSPD-------HSEHRADEPYRRALIGVYARLA 393 Query: 353 AKTQNVMDDEKK----GTPERYASPEQFIDDLNVIDRSLRHHYADYVADTYIKKLIRQVE 408 A + + ++ G Y E+ DL ++ SL H+ + +AD + L R ++ Sbjct: 394 ATCRELTGEDAGRHAVGPAPAYTRAEELRADLQIVIDSLAAHHGEALADARLASLARAID 453 Query: 409 LFGFHTATLDVRQHSQEHENAMTEILAKMNVTQDYAKLQENEKIGLLEKLLNDPRPLTSP 468 +FGFH A++D+RQ S HE + E+L V YA L E +K LL + L PR LT P Sbjct: 454 VFGFHLASIDLRQVSDVHEATVAELLRVAGVEGAYAALSEADKRTLLLRELQQPRLLTLP 513 Query: 469 YQTYSESTEECLAVYRAIFTAQEEYGKQCITSYLISMAEAASDILEVMVFSKEVGLFRKD 528 + TYSE+T L ++RA + YG + + +Y+IS E SD+LEVM+ KE G+FR Sbjct: 514 FHTYSETTASELDIFRAAREVRARYGSRIVRNYIISHTETLSDLLEVMLLQKEAGMFRHG 573 Query: 529 NDGTVVCTL--QAVPLFETIDDLHNAPQIMRTLLNLPIYRDAVRAMNDLQEIMLGYSDSN 586 +G+ L +PLFETI+DL NAPQIM LL LP + + A + QE+MLGYSDSN Sbjct: 574 TNGSGGAGLDVMVIPLFETIEDLRNAPQIMGELLALPGFDAVLAAQGNEQEVMLGYSDSN 633 Query: 587 KDGGVVTANYELRVALKEITTTADEFGIKLKFFHXXXXXXXXXXMPLNRSILAQPASTIG 646 KDGG +T+N+EL + + G++L+ FH P ++IL+QP T+ Sbjct: 634 KDGGFLTSNWELYKTELALVELFERKGVRLRLFHGRGGTVGRGGGPTYQAILSQPPGTVN 693 Query: 647 GGIKITEQGEVISSRYSMQGIAYRSLEQATSALITAA-INARSPQADLYDPKWEEIVARI 705 G I++TEQGE+ISS+++ I R+LE +A + A + R+ L + +E + + Sbjct: 694 GQIRLTEQGEIISSKFANPEIGRRNLETIVAATLEATLLPTRNRPKGLEE--FEAAMQAL 751 Query: 706 SEVSLSKYQDLIFRDPDFLNYFKESTPLPEVGELNIGSRPSKRKNSD----RFEDLRAIP 761 S+ + S Y+ L++ P F +YF +TP+ E+ +LN+GSRP+ RK D R EDLRAIP Sbjct: 752 SDHAFSAYRHLVYETPGFKDYFFATTPITEIADLNLGSRPASRKLMDRKQRRIEDLRAIP 811 Query: 762 WVFAWTQSRYLLPAWYAAGTGLQSFYDD------KEENLKIMQHMYEKFSFFTTLIDTLQ 815 W F+W Q R LLP W+ G+ +Q + D+ K L ++ M++++ FF L+ + Sbjct: 812 WGFSWGQCRLLLPGWFGFGSAVQRWLDEAGSAKAKAARLATLKRMHKQWPFFANLLSNMD 871 Query: 816 MAIAKADLIIAKEYAGMGKNEEARQRIFGQIEAEFKLTSELILKITGQQDILDNVPVIQE 875 M ++KADL +A YA + ++ + R +F +I AEF LT +++ ITGQ + L + P++ Sbjct: 872 MVLSKADLNVASRYAQLCEDRKLRNAVFSRISAEFTLTEQVLGAITGQSERLADNPLLAR 931 Query: 876 SIRLRNPYVDPLSYLQVQXXXXXXXXXXXXGDDAELLREVLLTINGIAAGLRNTG 930 SI+ R PY+DPL++LQV+ +DA + R + L+INGIAAGLRN+G Sbjct: 932 SIKNRFPYLDPLNHLQVELLKRFRSGKAGS-NDARVRRGIHLSINGIAAGLRNSG 985 >ref|ZP_00171283.1| hypothetical protein Raeut258501 [Ralstonia eutropha JMP134] Length = 956 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 348/962 (36%), Positives = 532/962 (55%), Gaps = 62/962 (6%) Query: 9 SKSNSNNLLRRDVRFLGNILGEVLVHQGGNELLEIVEKIRETSKSLRSLFLPELHNEFKE 68 S ++ + LR D+RFLG +LGE L Q G+ E+VE IR+T+ R E Sbjct: 17 SATDKDVPLREDIRFLGRLLGECLREQEGDATFEVVETIRQTAVRFRRENDRAAGTELDR 76 Query: 69 LINSLDPENRHQVIRAFAIYFQLVNIAEQNHRIRRKRDYERSAGETVQPGSIESAIQELR 128 L+ L + +QV+RAF+ + L NIAE H RR+R + AG Q GS++ A++++ Sbjct: 77 LLKRLSRDQTNQVVRAFSYFSHLANIAEDQHHNRRRRIHA-LAGSPPQDGSLQHALEKID 135 Query: 129 ERDFSHEDVHEIMNGLSLELVMTAHPTEAMRRAILDIHKRISDDVMGLDNPTLTFREREQ 188 + + + + ++ + V+TAHPTE R++ILD + I+ + D P +T RER++ Sbjct: 136 AAGVTGKQLRKFLDEALIVPVLTAHPTEVQRKSILDAEREIARLLAERDLP-MTARERDR 194 Query: 189 LREKLLNEVITLWQTDELRDRKPTVLDEVRNGMYYFHETIFQVLPDVYQELERCLSKYYP 248 +L +V TLWQT LRD + TV DE+ N + Y+ T +P + ELE ++ +P Sbjct: 195 NTAQLRAKVTTLWQTRMLRDSRLTVADEIDNALSYYRTTFLHGIPQLMSELEEDIAAIFP 254 Query: 249 GQN---------WHVPTYLRFGSWIGGDRDGNPSVTAAVTLQTLRLQRKLAIREYQRIMR 299 + +++ GSWIGGDRDGNP+VTA Q ++ + Y + Sbjct: 255 ASRKTKGAAAEAAPLAPFMQMGSWIGGDRDGNPNVTAETLDHAATQQSRMILGWYLDEVH 314 Query: 300 ELMQYLSFSTSIVKVTPELLQSIESDRDIIQLDKAKSWHNDNEPYR---IKLAYMIAKTQ 356 L LS ST +V +PELL E+ D S H +EPYR I + +A T Sbjct: 315 ALGAELSMSTLMVDASPELLALAEASPD-------HSAHRADEPYRRALIGIYARLAATS 367 Query: 357 NVMDDEKKGTP-------ERYASPEQFIDDLNVIDRSLRHHYADYVADTYIKKLIRQVEL 409 ++ + G P E Y+S E F D+ ++ SLR H+ + T I L+R + + Sbjct: 368 KMLTGQ--GAPRHPVADAEPYSSAEAFAADVQIVIDSLRAHHGRALTSTRIDALVRAIAV 425 Query: 410 FGFHTATLDVRQHSQEHENAMTEILAKMNVTQDYAKLQENEKIGLLEKLLNDPRPLTSPY 469 FGFH A++D+RQ S HE + E+ A V +DYA L E+ K+ LL L PR LT PY Sbjct: 426 FGFHLASVDMRQVSDVHEAVVAELFAAAGVEKDYAALPESRKLELLLAELRQPRLLTLPY 485 Query: 470 QTYSESTEECLAVYRAIFTAQEEYGKQCITSYLISMAEAASDILEVMVFSKEVGLFRKDN 529 YSE T LA+ + YG++ +Y+IS E SD++EVM+ KE G+ + Sbjct: 486 HEYSEQTRNELAILATARELRARYGQRVARNYIISHTETLSDLVEVMLLQKEAGMLK--- 542 Query: 530 DGTVVCT-------LQAVPLFETIDDLHNAPQIMRTLLNLPIYRDAVRAMNDLQEIMLGY 582 GT+ L +PLFETI+DL NA IM++LL+LP + + QE+MLGY Sbjct: 543 -GTLGSKTDPARMELMVIPLFETIEDLQNAAGIMQSLLDLPGFDSVIEHHGVEQEVMLGY 601 Query: 583 SDSNKDGGVVTANYELRVALKEITTTADEFGIKLKFFHXXXXXXXXXXMPLNRSILAQPA 642 SDSNKDGG +T+N+EL A + ++ +KL+ FH P ++IL+QP Sbjct: 602 SDSNKDGGFLTSNWELYKAELALVQLFEQRKVKLRLFHGRGGTVGRGGGPTYQAILSQPP 661 Query: 643 STIGGGIKITEQGEVISSRYSMQGIAYRSLEQATSALITAAINARSPQADLYDPK----W 698 T+ G I++TEQGE+I+S+++ I R+LE +A + A++ PQ + PK + Sbjct: 662 GTVNGQIRLTEQGEIINSKFANAEIGRRNLETVIAATLEASL---LPQQNA--PKELSTF 716 Query: 699 EEIVARISEVSLSKYQDLIFRDPDFLNYFKESTPLPEVGELNIGSRPSKRKNSD----RF 754 E I+ ++S+ + Y++L++ P F +YF +TP+ E+ +LN+GSRP+ RK D R Sbjct: 717 EGIMQQLSDRAFGAYRNLVYETPGFKDYFFATTPITEIADLNLGSRPASRKLMDKKNRRI 776 Query: 755 EDLRAIPWVFAWTQSRYLLPAWYAAGTGLQSFYDD------KEENLKIMQHMYEKFSFFT 808 EDLRAIPW F+W Q R LLP WY G+ ++S D ++ + ++ M + + FF+ Sbjct: 777 EDLRAIPWGFSWGQCRLLLPGWYGFGSAVKSLLDTAPDEKARKAAVATLRKMVKTWPFFS 836 Query: 809 TLIDTLQMAIAKADLIIAKEYAGMGKNEEARQRIFGQIEAEFKLTSELILKITGQQDILD 868 TL+ + M +AK DL +A YA + + R+ +F +I E+ LT E++ +TG Q+ L Sbjct: 837 TLLSNMDMVLAKTDLAVASRYAQLCDDAALRKNVFARISKEWHLTCEMLALVTGHQERLA 896 Query: 869 NVPVIQESIRLRNPYVDPLSYLQVQXXXXXXXXXXXXGDDAELLREVLLTINGIAAGLRN 928 + P++ SI+ R Y+DPL++LQV+ GDD + R + LTING+AAGLRN Sbjct: 897 DNPLLARSIKNRFAYLDPLNHLQVE--LLKRYRSGKDGDDIRVRRGIHLTINGVAAGLRN 954 Query: 929 TG 930 TG Sbjct: 955 TG 956 >ref|NP_840673.1| Phosphoenolpyruvate carboxylase [Nitrosomonas europaea ATCC 19718] emb|CAD84500.1| Phosphoenolpyruvate carboxylase [Nitrosomonas europaea ATCC 19718] Length = 933 Score = 590 bits (1520), Expect = e-167, Method: Compositional matrix adjust. Identities = 338/930 (36%), Positives = 518/930 (55%), Gaps = 35/930 (3%) Query: 17 LRRDVRFLGNILGEVLVHQGGNELLEIVEKIRETSKSLRSLFLPELHNEFKELINSLDPE 76 LR D+R LG +LG+ + G + +VE IR+TS R +E ++N L + Sbjct: 23 LREDIRLLGRMLGDTIRELEGETMFNLVETIRQTSVRFRRDQDEAAEHELDTILNHLSHK 82 Query: 77 NRHQVIRAFAIYFQLVNIAEQNHRIRRKRDYERSAGETVQPGSIESAIQELRERDFSHED 136 V+RAF+ + L NIAE H RR+R + R AG Q GS+ A+Q + ++ E Sbjct: 83 ETIAVVRAFSYFSLLSNIAEDLHHNRRRRAHLR-AGSPPQDGSVTLALQRVVKKGIDAEQ 141 Query: 137 VHEIMNGLSLELVMTAHPTEAMRRAILDIHKRISDDVMGLDNPTLTFREREQLREKLLNE 196 + + V+TAHPTE RR+ILD +I + D LT E E L + Sbjct: 142 LQNFFASALISPVLTAHPTEVQRRSILDYQLKIQRLLKERDRTQLTPNEMRHNEEDLRSA 201 Query: 197 VITLWQTDELRDRKPTVLDEVRNGMYYFHETIFQVLPDVYQELERCLSKYYPGQNWHVPT 256 + TLWQT LR + TV DE+ NG+ Y+H T + +P +Y +LE L ++ + + Sbjct: 202 IQTLWQTRVLRSVRLTVQDEIENGLIYYHYTFLRQIPYIYAKLEDILERHMDKAAPRIAS 261 Query: 257 YLRFGSWIGGDRDGNPSVTAAVTLQTLRLQRKLAIREYQRIMRELMQYLSFSTSIVKVTP 316 +LR GSWIGGDRDGNP VT + L L + Y + + Q +S S ++KV+ Sbjct: 262 FLRIGSWIGGDRDGNPFVTHQIMLHAAERHSALILDFYISEVERIGQTMSLSERLIKVSS 321 Query: 317 EL--LQSIESDRDIIQLDKAKSWHNDNEPYRIKL----AYMIAKTQNVMDDEK----KGT 366 +L L S ++D EPYR A +IA ++++ + + Sbjct: 322 DLEGLASTAPGLPASRID---------EPYRRVFLGIHARLIATSRHLGSSIRGCCQENN 372 Query: 367 PERYASPEQFIDDLNVIDRSLRHHYADYVADTYIKKLIRQVELFGFHTATLDVRQHSQEH 426 E YA +F+ DL+++ RSLR H +D +A ++ L R ++FGFH A LD+RQHS+ H Sbjct: 373 AEPYADSAEFVHDLDIVIRSLRQHRSDRLAQGALRDLRRAADVFGFHLAPLDMRQHSKIH 432 Query: 427 ENAMTEILAKMNVTQD--YAKLQENEKIGLLEKLLNDPRPLTSPYQTYSESTEECLAVYR 484 E ++E+ K N D Y ++ +E++ L L PR L + + +S+ T+ L + + Sbjct: 433 EQVISELYEK-NTRDDRNYLEMSRSERVEWLLAELRHPRSLVTSFSDFSDVTQGELRILK 491 Query: 485 AIFTAQEEYGKQCITSYLISMAEAASDILEVMVFSKEVGLFRKDNDGTVVCTLQAVPLFE 544 Q +G + +Y+ISMA ILEV + KE GL + +D T+ +PLFE Sbjct: 492 MAAEIQRRFGHAALPNYIISMATGVVHILEVALLLKEAGLLQFGDDPR--STVNIIPLFE 549 Query: 545 TIDDLHNAPQIMRTLLNLPIYRDAVRAMNDLQEIMLGYSDSNKDGGVVTANYELRVALKE 604 TIDDL +M L +LP YR + + ++LQE+MLGYSDSNKDGG VT+N+E+ A E Sbjct: 550 TIDDLRGCASVMDELFSLPDYRKLLLSRDNLQEVMLGYSDSNKDGGFVTSNWEIYKAEIE 609 Query: 605 ITTTADEFGIKLKFFHXXXXXXXXXXMPLNRSILAQPASTIGGGIKITEQGEVISSRYSM 664 +T D G++L+ FH P + ILAQP ++ G I++TEQGEVI+S+Y+ Sbjct: 610 LTRVFDRHGVRLRLFHGRGGTVGRGGGPSYQGILAQPPGSVSGQIRLTEQGEVIASKYTD 669 Query: 665 QGIAYRSLEQATSALITAAINARSPQADLYDPKWEEIVARISEVSLSKYQDLIFRDPDFL 724 I R+LE +A I + + R + P + +I+ +S + + Y+DL+++ P F Sbjct: 670 PEIGRRNLETLVAATIESTLLDRDA-VHYHAPHYHQIMEELSSSACAAYRDLVYKTPGFK 728 Query: 725 NYFKESTPLPEVGELNIGSRPSKRKNSDRFEDLRAIPWVFAWTQSRYLLPAWYAAGTGLQ 784 +F ESTP+ E+ L+IGSRP+ RK SD+ EDLRAIPWVF+W+ +R ++P WY GT ++ Sbjct: 729 QFFLESTPIREIAGLHIGSRPTSRKPSDKIEDLRAIPWVFSWSLNRTMIPGWYGFGTAVE 788 Query: 785 SFYD---DKEENLKIMQHMYEKFSFFTTLIDTLQMAIAKADLIIAKEYAGMGKNEEARQR 841 +F +++E LK +Q MY + F TL+ + M ++K+DL IA YA + + E RQ Sbjct: 789 NFVQQAGNEQEALKQLQEMYRTWPFLQTLLSNMDMVLSKSDLGIASRYAELVTDPELRQS 848 Query: 842 IFGQIEAEFKLTSELILKITGQQDILDNVPVIQESIRLRNPYVDPLSYLQVQXXXXXXXX 901 +F I E++L + + ITG ++L + P + SIR+R PY+DPL++LQ++ Sbjct: 849 VFTSIRTEWELCMKWLFAITGYSELLQDNPTLARSIRIRTPYIDPLNHLQIE-----LLR 903 Query: 902 XXXXGDDAELLREVL-LTINGIAAGLRNTG 930 GDD + +R + LTING+A GLRN+G Sbjct: 904 RYRSGDDDDTVRRAIHLTINGVATGLRNSG 933 >ref|NP_923360.1| phosphoenolpyruvate carboxylase [Gloeobacter violaceus] dbj|BAC88355.1| phosphoenolpyruvate carboxylase [Gloeobacter violaceus PCC 7421] Length = 939 Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust. Identities = 357/953 (37%), Positives = 545/953 (57%), Gaps = 46/953 (4%) Query: 3 ELTTAVSKSN-SNNLLRRDVRFLGNILGEVLVHQGGNELLEIVEKIRETSKSLRSLFLPE 61 +L A S S S+ LR ++ + +L +V +GG +L+E+++++ + + + Sbjct: 8 DLAAAGSPSALSHQSLRDNIELVEQLLRQVAAQEGGGDLVELLDRLWASHQ--------D 59 Query: 62 LHNEFKELINSLDPENRHQVIRAFAIYFQLVNIAEQNHRIRRKRDYERSAGETVQPGSIE 121 E LI L E IRAF+IYFQL+NI EQ+H +R R + +T QPGS Sbjct: 60 RTGEGLALIRELSLEKSVLAIRAFSIYFQLINIVEQHHERKRLRLQASFSADTAQPGSFC 119 Query: 122 SAIQELRERDFSHEDVHEIMNGLSLELVMTAHPTEAMRRAILDIHKRISDDVMGLDNPTL 181 E++ S ++ ++ L + LV TAHPTE +RR I H+RI + LDN L Sbjct: 120 WLFDEMKSLGVSTPEIERVLQQLDVRLVFTAHPTEIVRRTIRTKHRRIVHLLDDLDN-AL 178 Query: 182 TFREREQLREKLLNEVITLWQTDELRDRKPTVLDEVRNGMYYFHETIFQVLPDVYQELER 241 + +++Q+ +L E+ W+TDEL +PTVLDEV + ++YF E +F+ +P V EL R Sbjct: 179 SEWQQQQVHTTMLEEIRIWWRTDELHQVRPTVLDEVAHTVHYFEEVLFEAMPRVRSELVR 238 Query: 242 CLSKYYPGQNWHVPTYLRFGSWIGGDRDGNPSVTAAVTLQTLRLQRKLAIREYQRIMREL 301 CL ++P + T+ RFGSW+G DRDGNPSV A VT +T QR + +Y + + L Sbjct: 239 CLDMFHPSLTRSLGTFCRFGSWVGSDRDGNPSVNALVTWKTACHQRSRVLAKYIKSVERL 298 Query: 302 MQYLSFSTSIVKVTPELLQSIESD-RDIIQLDKAKSWHNDNEPYRIKLAYMIAKTQNVMD 360 LS + +LL ++E D RD+ ++ + S EPYR+KL+Y++ + ++ + Sbjct: 299 RDLLSLAEG--NPPQDLLLALEQDQRDLGEVYERYSVVYLQEPYRLKLSYILERLEHTRE 356 Query: 361 D----EKKGTPERYASPEQ------------FIDDLNVIDRSLRHHYADYVADTYIKKLI 404 E G P+R + P++ + +L+++ + LR + ++ LI Sbjct: 357 RNAWLEVHG-PQRLSQPDEPGWLHYYRHAHELLAELHLLRQCLR---TTGIGCRPLETLI 412 Query: 405 RQVELFGFHTATLDVRQHSQEHENAMTEILAKMNVTQD-YAKLQENEKIGLLEKLLNDPR 463 QVE+FGFH A LDVRQ S HE+ +TE+ AK+ +T YA+L E ++ L + L R Sbjct: 413 DQVEVFGFHLAGLDVRQDSTRHEDTLTEVSAKLRLTATPYAELDEQARLEWLVRELQTLR 472 Query: 464 PLTSPYQTYSESTEECLAVYRAIFTAQEEYGKQCITSYLISMAEAASDILEVMVFSKEVG 523 PL +S TEE + +R I Q+E+G + +Y+ISM++ ASD+LEV++ ++E G Sbjct: 473 PLIPAELPFSARTEETIQTFRMIRRLQKEFGSEICHTYIISMSKQASDLLEVLLLAEEAG 532 Query: 524 LFRKDNDGTVVCTLQAVPLFETIDDLHNAPQIMRTLLNLPIYRDAVRAMNDLQEIMLGYS 583 LF + T TL VPLFET++DL NAP ++ L +LP+YR + +LQE+MLGYS Sbjct: 533 LF---DPATGTGTLMVVPLFETVEDLRNAPHVLEQLFSLPLYRCYLTCHQNLQEVMLGYS 589 Query: 584 DSNKDGGVVTANYELRVALKEITTTADEFGIKLKFFHXXXXXXXXXXMPLNRSILAQPAS 643 DSNKD G +++++E+ +A + I A G++L+ FH P ++ILAQP Sbjct: 590 DSNKDSGFLSSSWEIFLAQQHIQQVARRHGVQLRIFHGRGGTVGRGGGPSYQAILAQPDG 649 Query: 644 TIGGGIKITEQGEVISSRYSMQGIAYRSLEQATSALITAAINARSPQADLYDPKWEEIVA 703 T+ G IKITEQGEV++S+YS+ +A ++E T+A+I A++ SP WE + Sbjct: 650 TVSGRIKITEQGEVLASKYSLFELAAFNIETVTAAVIQASVLPTSPPG---SRNWELRLQ 706 Query: 704 RISEVSLSKYQDLIFRDPDFLNYFKESTPLPEVGELNIGSRPSKRKNSDRFEDLRAIPWV 763 +S+V+ Y+ L++ F+++F TP+ E+ +L I SRPS+R+ LRAIPWV Sbjct: 707 ELSDVARRTYRQLVYEQEGFIDFFCHVTPIDEISQLQISSRPSRREGRRDLASLRAIPWV 766 Query: 764 FAWTQSRYLLPAWYAAGTGLQSFYD-DKEENLKIMQHMYEKFSFFTTLIDTLQMAIAKAD 822 F+WTQSR+LL AWY GT L F ++E NL ++ MY ++ FF TLI ++M +AK D Sbjct: 767 FSWTQSRFLLQAWYGLGTALDGFIRCNRERNLAELRSMYRQWPFFRTLISKVEMTLAKVD 826 Query: 823 LIIAKEYAG---MGKNEEARQRIFGQIEAEFKLTSELILKITGQQDILDNVPVIQESIRL 879 L +A Y ++E + IF I AE + T E +L IT + +L++ P +Q SI L Sbjct: 827 LQVAANYVQELLPKEHEHTGECIFALIAAELERTRECVLAITEHRQLLEDNPPLQRSIAL 886 Query: 880 RNPYVDPLSYLQVQXXXXXXXXXXXXGDDA--ELLREVLLTINGIAAGLRNTG 930 RN + PL YLQ + ELLR LLTINGIAAG+RNTG Sbjct: 887 RNATIAPLGYLQATLLKYLRYENRQPRSYSRNELLRGALLTINGIAAGMRNTG 939 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.135 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,287,805,202 Number of extensions: 52847996 Number of successful extensions: 145792 Number of sequences better than 1.0e-05: 855 Number of HSP's gapped: 142209 Number of HSP's successfully gapped: 875 Length of query: 930 Length of database: 757,237,578 Length adjustment: 135 Effective length of query: 795 Effective length of database: 390,699,213 Effective search space: 310605874335 Effective search space used: 310605874335 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)