BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0069.0004.p (701 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_389739.1| similar to formate dehydrogenase [Bacillus subt... 755 0.0 ref|ZP_00028998.1| COG0243: Anaerobic dehydrogenases, typically ... 545 e-153 gb|EAK32512.1| unknown [environmental sequence] 539 e-151 gb|EAI97891.1| unknown [environmental sequence] 535 e-150 ref|NP_520980.1| HYPOTHETICAL OXIDOREDUCTASE PROTEIN [Ralstonia ... 514 e-144 >ref|NP_389739.1| similar to formate dehydrogenase [Bacillus subtilis] pir||G69895 formate dehydrogenase homolog yoaE - Bacillus subtilis gb|AAB84420.1| putative formate dehydrogenase [Bacillus subtilis] emb|CAB13750.1| yoaE [Bacillus subtilis subsp. subtilis str. 168] Length = 677 Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/674 (54%), Positives = 466/674 (69%), Gaps = 11/674 (1%) Query: 6 DGVFPAVCPLDCPDTCGLLVHKQNGKIIKVEGNPEHPVTKGAICNKVRHMAERVHHPERL 65 +G+F +VC LDCPD CGLL+HK++GKI+KV+G+P+HPVT G ICNKVR+M ER++ +RL Sbjct: 9 NGIFKSVCSLDCPDQCGLLIHKKDGKIVKVQGDPDHPVTAGNICNKVRNMTERIYDEKRL 68 Query: 66 LQPLRRTGPKGSGSFTPISWEEAIGEITGRFKELSADYGPESILPYSFYGNMGVLSVDGM 125 PL+RTG KG F PISW+EAI IT R+K+L + G ESILPYSFYGNMG L+ +GM Sbjct: 69 TTPLKRTGAKGQAIFEPISWKEAIDTITSRWKQLIDEEGAESILPYSFYGNMGKLTAEGM 128 Query: 126 DRRFFNALGASRLEQSICNAAGSAGWKYTMGFNGGTSPEDTVNADLIIVWGGNIVSTSMH 185 DRRFF +G+S+LE++IC+ AGS G+KYTMG + G PE+TV+ L I WG N VST+MH Sbjct: 129 DRRFFYRMGSSQLERTICSKAGSEGYKYTMGISAGIDPEETVHTKLFIFWGINAVSTNMH 188 Query: 186 QVVYAEQARKRGAKVVVIDVHRNRTAQWADWFLPLYPGTDTALALGLMHILFRDGMTDDA 245 Q+ A++ARK+GAK+VVIDVH+N+T + ADWF+P+ PGTD+ALALG+MHILF++ + D+A Sbjct: 189 QITIAQKARKKGAKIVVIDVHKNQTGRLADWFIPIKPGTDSALALGIMHILFKENLHDEA 248 Query: 246 FLERYTIGHEELRSHVLAYPPERVAEITGIAAADIEKLAKLYGEAKVSHIHIGNGLQHHD 305 FL YT+G+EELR HV Y PE+V+ ITG++ DI +LAK+YGE S I IGNG QHHD Sbjct: 249 FLSEYTVGYEELREHVKQYDPEKVSTITGVSTEDIYRLAKMYGETSPSFIRIGNGPQHHD 308 Query: 306 NGGMNVRTIACLPALTGAWLKTXXXXXXXXXXYSSTNDRALTRPDLXXXXXXXXXXXXXX 365 NGGM VRTIACLPA+TG WL T N AL RPDL Sbjct: 309 NGGMIVRTIACLPAITGQWLHTGGGAIKHNSGILEYNTNALQRPDLLKGRTPRSFNMNQL 368 Query: 366 GEALELKEQPVMGMFVYCSNPVVVAPDAERVRKGFAREDLFTVVHDLFMTDTALYADIVL 425 G L + P+ +F+Y +NP VVAP+A +VR+G REDLFTVVHDLF+T+TA YADIVL Sbjct: 369 GRVLLETDPPIRSLFIYGTNPAVVAPEANKVRQGLLREDLFTVVHDLFLTETAAYADIVL 428 Query: 426 PATSTFENVDLYTSYWHHYIQLQEPVLDAPGECKSNVEVFSLLGKAMGLDAEAFSESPYD 485 PATS FEN D YTSYWHHYIQLQ+PV++ GE KSN EVF LL +AMG + +S Sbjct: 429 PATSAFENTDFYTSYWHHYIQLQQPVIERYGESKSNTEVFRLLAEAMGFTDQELKDSDEV 488 Query: 486 MIRQALDYPRNPYLNGVTLERLTAERFVKLDMSPQADYLDNLPTPSGKIELYSKAMELAG 545 +IRQALD+P NP+L + + LT F+K + + LPTPSGKIELYS+ M+ G Sbjct: 489 LIRQALDHPDNPHLAEIDYDSLTKHSFMKAKRE-KPLFPGELPTPSGKIELYSEKMKQDG 547 Query: 546 LPPLPTYTPLKEGYDGQQRPQPGTAYPLMFVSPPNHNFLNSTFSNVEKHQRMEKRPTLQI 605 P LPTYTPL + +P M+V PNHNFLNSTFSN EKH ++EK P L I Sbjct: 548 FPALPTYTPLVTDNE----------HPFMYVPGPNHNFLNSTFSNNEKHIKLEKTPKLFI 597 Query: 606 HPEDAAVRGIGEGDGLTVYNGRGSIELWAMVTDKMLPGTVISQGLWWEGKGHKQRVNVLT 665 + +DA GI +G + ++N RG EL A V +++LPG V+SQGLW + +G K Sbjct: 598 NTKDAEKHGIVDGAPVRIWNSRGECELTAAVGEQVLPGVVVSQGLWADEQGKKTACKRAN 657 Query: 666 PDRLADMGNGATFF 679 P L G F Sbjct: 658 PRSLVRYGRRRHLF 671 >ref|ZP_00028998.1| COG0243: Anaerobic dehydrogenases, typically selenocysteine-containing [Burkholderia fungorum] Length = 692 Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust. Identities = 295/687 (42%), Positives = 410/687 (59%), Gaps = 15/687 (2%) Query: 11 AVCPLDCPDTCGLLVHKQNGKIIKVEGNPEHPVTKGAICNKVRHMAERVHHPERLLQPLR 70 AVCP DCPDTC + V + G+ IKV +PEHP T+GA+C KV AERVHHP+RL +P++ Sbjct: 10 AVCPHDCPDTCAMRVTVEAGRAIKVVADPEHPPTQGALCTKVSRYAERVHHPQRLTRPMK 69 Query: 71 RTGPKGSGSFTPISWEEAIGEITGRFKELSADYGPESILPYSFYGNMGVLSVDGMDRRFF 130 R G KG G F PI W+EA R E+ A PE+ILPYS+ G MG++ D + +RFF Sbjct: 70 RVGRKGEGRFEPIGWDEAFQLAARRLSEI-AHRAPEAILPYSYAGTMGLIQGDSIAQRFF 128 Query: 131 NALGASRLEQSICNAAGSAGWKYTMGFNGGTSPEDTVNADLIIVWGGNIVSTSMHQVVYA 190 + LGAS+L+++IC AAG+AG KYT G + G E ++LI++WG N +++++H A Sbjct: 129 HKLGASQLDRTICAAAGTAGLKYTYGASLGMLTEFFDESELILIWGSNPIASNLHFWTRA 188 Query: 191 EQARKRGAKVVVIDVHRNRTAQWADWFLPLYPGTDTALALGLMHILFRDGMTDDAFLERY 250 +QA++RGA+++ ID +R+ TA+ + L PGTD+ALALG++++L R+ + D A++E + Sbjct: 189 QQAKRRGARLIAIDPYRSLTAEKCHQHIALKPGTDSALALGMINVLIRENLLDHAYIEAH 248 Query: 251 TIGHEELRSHVLAYPPERVAEITGIAAADIEKLAKLYGEAKVSHIHIGNGLQHHDNGGMN 310 T G E L++ L+YPP R AEI GI I LA+LYG + + I + GLQ GG Sbjct: 249 TSGFEALKARALSYPPSRAAEICGIDERVIVDLARLYGGTRKAAIRMNYGLQRVRGGGNA 308 Query: 311 VRTIACLPALTGAWLKTXXXXXXXXXXYSSTNDRALTRPDLX---XXXXXXXXXXXXXGE 367 VR IACLP+LTGAW + ++ + AL RPDL G+ Sbjct: 309 VRAIACLPSLTGAWRERAGGVLLSSGGWAPVDSYALQRPDLMPGWPTRTSRVINMNGIGD 368 Query: 368 ALELKEQPVMG-----MFVYCSNPVVVAPDAERVRKGFAREDLFTVVHDLFMTDTALYAD 422 AL K G + VY SNPV VAPD+ERV GFAREDLFT+V + F TDTA YAD Sbjct: 369 ALLHKGDAAFGPKVEAIVVYNSNPVAVAPDSERVAAGFAREDLFTIVLEHFQTDTADYAD 428 Query: 423 IVLPATSTFENVDLYTSYWHHYIQLQEPVLDAPGECKSNVEVFSLLGKAMGLDAEAFSES 482 ++LPAT+ E++D++ SY H ++ + P + GE N E+F + + MGLD A ES Sbjct: 429 LLLPATTQLEHLDVHKSYGHTHVMVNLPAIAPVGEALPNTEIFRGIARHMGLDEPALFES 488 Query: 483 PYDMIRQALDYPRNPYLNGVTLERLTAERFVKLDMSPQADYLD-NLPTPSGKIELYSKAM 541 + + A + ++ L GV E L + KL++ P A + + TPSGK E YS+ + Sbjct: 489 DETVAQAAFRW-QDRTLEGVDWETLKKTGWAKLNL-PDAPFAEGGFQTPSGKCEFYSERL 546 Query: 542 ELAGLPPLPTYTPLKEGYDGQQRPQPGTAYPLMFVSPPNHNFLNSTFSNVEKHQRMEKRP 601 GL PLP Y P E DG P+ YPL +SPP NFLNSTF N+E + E P Sbjct: 547 AQRGLDPLPDYLPPYESADGA--PELAARYPLAMISPPARNFLNSTFVNIESLRSTEGEP 604 Query: 602 TLQIHPEDAAVRGIGEGDGLTVYNGRGSIELWAMVTDKMLPGTVISQGLWWEGKGHKQR- 660 L +HP DA R I +GD + ++N RGS++ VTDK G V+ +WW+ R Sbjct: 605 HLDMHPADAQSRDIVDGDQVRIFNDRGSMQARVRVTDKAREGLVVGLSIWWKKLAPDGRN 664 Query: 661 VNVLTPDRLADMGNGATFFSTTVEVKR 687 N +T L D+G ATF+ VEV+R Sbjct: 665 ANQVTSQALTDLGGSATFYDCLVEVER 691 >gb|EAK32512.1| unknown [environmental sequence] Length = 691 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 293/687 (42%), Positives = 410/687 (59%), Gaps = 16/687 (2%) Query: 11 AVCPLDCPDTCGLLVHKQNGKIIKVEGNPEHPVTKGAICNKVRHMAERVHHPERLLQPLR 70 AVCP DCPDTC + V +NGK IKV G+P+HP T+G +C KV A+RVHHP+RL PL+ Sbjct: 10 AVCPHDCPDTCAMRVTVENGKAIKVTGDPDHPPTQGVLCTKVSRYADRVHHPDRLTVPLK 69 Query: 71 RTGPKGSGSFTPISWEEAIGEITGRFKELSADYGPESILPYSFYGNMGVLSVDGMDRRFF 130 R G KG G PISW+EA EI R E++A PE+I+PYS+ G MG++ +G+ +RFF Sbjct: 70 RVGAKGEGHLVPISWDEAFDEIGRRLGEIAARE-PEAIVPYSYAGTMGLVQGEGIAQRFF 128 Query: 131 NALGASRLEQSICNAAGSAGWKYTMGFNGGTSPEDTVNADLIIVWGGNIVSTSMHQVVYA 190 + LGASRLE++IC AAG+AG +YT G + G E ++LI++WG N +++S+H A Sbjct: 129 HKLGASRLERTICAAAGAAGLRYTYGGSLGMHLEHFEESELILIWGANPIASSLHFWTRA 188 Query: 191 EQARKRGAKVVVIDVHRNRTAQWADWFLPLYPGTDTALALGLMHILFRDGMTDDAFLERY 250 ++A++RGA++V ID +R+ TA+ + L PGTD A ALG+MH+L + + D ++ + Sbjct: 189 QEAKRRGARLVAIDPYRSLTAEKCHQHIALKPGTDGAFALGMMHVLITEDLLDHDYIASH 248 Query: 251 TIGHEELRSHVLAYPPERVAEITGIAAADIEKLAKLYGEAKVSHIHIGNGLQHHDNGGMN 310 T+G + L+ ++YPPERVA+I GI A ++ LA+ YG + + I + G+Q GG Sbjct: 249 TLGFDALKERAMSYPPERVAQICGIDAFELIDLARRYGATRKASIRLNYGMQRVRGGGNA 308 Query: 311 VRTIACLPALTGAWLKTXXXXXXXXXXYSSTNDRALTRPDLX---XXXXXXXXXXXXXGE 367 VR IA LPALTGAW + N AL RPDL G+ Sbjct: 309 VRAIASLPALTGAWRDRAGGLLLSSSESAPVNQAALLRPDLMPGWPHKLPRIINMNAIGD 368 Query: 368 ALELKEQPVMG-----MFVYCSNPVVVAPDAERVRKGFAREDLFTVVHDLFMTDTALYAD 422 AL G + VY SNPV VAPD+ +V GFAR+DLFTVV + F TDT +AD Sbjct: 369 ALLHPGDATFGPKVEAVIVYNSNPVAVAPDSSKVAAGFARDDLFTVVLEHFKTDTVDFAD 428 Query: 423 IVLPATSTFENVDLYTSYWHHYIQLQEPVLDAPGECKSNVEVFSLLGKAMGLDAEAFSES 482 IVLPAT+ E++D++ SY H Y+ P + GE + N E+F + ++MGLD A S Sbjct: 429 IVLPATTQLEHLDIHKSYGHTYVMANLPSIPPVGEARPNTEIFRGIARSMGLDEPALYHS 488 Query: 483 PYDMIRQALDYPRNPYLNGVTLERLTAERFVKLDMSPQADYLD-NLPTPSGKIELYSKAM 541 ++ R AL + +P L + L ++KL + P+A + + TPSGK E YS + Sbjct: 489 DEEVARAALRW-DDPVL-ASDWDTLKRAGWLKLKL-PEAPFANGGFRTPSGKCEFYSPRL 545 Query: 542 ELAGLPPLPTYTPLKEGYDGQQRPQPGTAYPLMFVSPPNHNFLNSTFSNVEKHQRMEKRP 601 E G+ P+P Y P E + P+ YPL +SPP +FLNSTF NV+ + E P Sbjct: 546 EQMGVDPVPDYLPPFES--AEAAPELAARYPLAMISPPARHFLNSTFVNVDSLRHTEGEP 603 Query: 602 TLQIHPEDAAVRGIGEGDGLTVYNGRGSIELWAMVTDKMLPGTVISQGLWWEGKGHKQR- 660 L IHP DA VRGI EGD + ++N RGS++ A VTD+ G V+ +WW+ R Sbjct: 604 HLDIHPSDADVRGIAEGDVVRIFNDRGSMQAVARVTDRARAGLVVGLSIWWKKLSPDGRN 663 Query: 661 VNVLTPDRLADMGNGATFFSTTVEVKR 687 N +T L D+GN ATF+ VEV+R Sbjct: 664 ANEVTSQALTDLGNSATFYDCLVEVER 690 >gb|EAI97891.1| unknown [environmental sequence] Length = 692 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 287/687 (41%), Positives = 406/687 (59%), Gaps = 15/687 (2%) Query: 11 AVCPLDCPDTCGLLVHKQNGKIIKVEGNPEHPVTKGAICNKVRHMAERVHHPERLLQPLR 70 AVCP DCPDTC + V ++G+ +KV G+P+HP T+GA+C KV AERVHHP RL P++ Sbjct: 10 AVCPHDCPDTCAMRVVVEDGRAVKVVGDPDHPPTQGALCTKVSRYAERVHHPNRLTTPMK 69 Query: 71 RTGPKGSGSFTPISWEEAIGEITGRFKELSADYGPESILPYSFYGNMGVLSVDGMDRRFF 130 R G KG G F PISW+EA R E+ A+ PE+I+PYS+ G MG++ D + +RFF Sbjct: 70 RVGRKGEGRFEPISWDEAFELAATRLSEI-ANRAPEAIVPYSYAGTMGLVQGDSIAQRFF 128 Query: 131 NALGASRLEQSICNAAGSAGWKYTMGFNGGTSPEDTVNADLIIVWGGNIVSTSMHQVVYA 190 + LGAS+L+++IC AAG+AG KYT G + G E +++I++WG N +++++H A Sbjct: 129 HKLGASQLDRTICAAAGAAGLKYTYGASVGMLTEFFAESEVILIWGSNPIASNLHFWTRA 188 Query: 191 EQARKRGAKVVVIDVHRNRTAQWADWFLPLYPGTDTALALGLMHILFRDGMTDDAFLERY 250 ++A++ GA+++ ID +R+ TA+ + L PGTD ALALG++++L + + D A+++ + Sbjct: 189 QEAKRHGARLIAIDPYRSLTAEKCHQHVALKPGTDGALALGMINVLIAENLLDHAYIDAH 248 Query: 251 TIGHEELRSHVLAYPPERVAEITGIAAADIEKLAKLYGEAKVSHIHIGNGLQHHDNGGMN 310 T+G EEL+S L YPP R A+I GI I LA+LYG K + I + GLQ GG Sbjct: 249 TLGFEELKSRALTYPPSRAAQICGIDEQVIVDLARLYGSTKKAAIRMNYGLQRVRGGGNA 308 Query: 311 VRTIACLPALTGAWLKTXXXXXXXXXXYSSTNDRALTRPDLX---XXXXXXXXXXXXXGE 367 VR IACLP+LTGAW + ++ + AL RPDL G Sbjct: 309 VRAIACLPSLTGAWRERAGGVLLSSGGWAPVDSHALQRPDLMPGWPAKASRVINMNAIGN 368 Query: 368 ALELKEQPVMG-----MFVYCSNPVVVAPDAERVRKGFAREDLFTVVHDLFMTDTALYAD 422 AL G + VY SNPV VAPD+ERV GFAREDLFT+V + F TDTA YAD Sbjct: 369 ALLHPGDATFGPKIEAIVVYNSNPVAVAPDSERVAAGFAREDLFTIVLEHFQTDTADYAD 428 Query: 423 IVLPATSTFENVDLYTSYWHHYIQLQEPVLDAPGECKSNVEVFSLLGKAMGLDAEAFSES 482 ++LPAT+ E++D++ SY H ++ P + G+ + N E+F L + MGL A ES Sbjct: 429 LLLPATTQLEHLDVHKSYGHTHVMANLPAIAPLGDARPNTEIFRGLARRMGLQEPALYES 488 Query: 483 PYDMIRQALDYPRNPYLNGVTLERLTAERFVKLDMSPQADYLD-NLPTPSGKIELYSKAM 541 + A + ++ L+GV+ E L + L++ P A + + TPSGK E +S+ + Sbjct: 489 DDAIAESAFRW-KDKTLDGVSWESLKETGWAALNL-PDAPFAEGGFRTPSGKCEFFSERL 546 Query: 542 ELAGLPPLPTYTPLKEGYDGQQRPQPGTAYPLMFVSPPNHNFLNSTFSNVEKHQRMEKRP 601 GL PLP Y P E DG P YPL +SPP NFLNSTF N+E + E P Sbjct: 547 AQQGLDPLPDYLPPYESADGA--PALAARYPLAMISPPARNFLNSTFVNIESLRSTEGEP 604 Query: 602 TLQIHPEDAAVRGIGEGDGLTVYNGRGSIELWAMVTDKMLPGTVISQGLWWEGKGHKQR- 660 L IHP DA R I +GD + ++N RG+++ A VT K G V+ +WW+ R Sbjct: 605 HLDIHPADAQRRNIADGDQVRIFNDRGAMQARARVTAKTREGLVVGLSIWWKKLAPDGRN 664 Query: 661 VNVLTPDRLADMGNGATFFSTTVEVKR 687 N +T L D+G ATF+ VEV+R Sbjct: 665 ANQVTSQALTDLGGSATFYDCLVEVER 691 >ref|NP_520980.1| HYPOTHETICAL OXIDOREDUCTASE PROTEIN [Ralstonia solanacearum] emb|CAD16566.1| HYPOTHETICAL OXIDOREDUCTASE PROTEIN [Ralstonia solanacearum] Length = 698 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 283/694 (40%), Positives = 389/694 (56%), Gaps = 23/694 (3%) Query: 8 VFPAVCPLDCPDTCGLLVHKQNGKIIKVEGNPEHPVTKGAICNKVRHMAERVHHPERLLQ 67 V A CP DCPDTC LLV + G+ +V+G+PEHP T+G +C KV AER +HP+RLL Sbjct: 5 VIRAACPHDCPDTCALLVTVEGGRATRVQGDPEHPTTQGVLCTKVNRYAERTYHPDRLLT 64 Query: 68 PLRRTGPKGSGSFTPISWEEAIGEITGRFKELSADYGPESILPYSFYGNMGVLSVDGMDR 127 P++R G KG G F PISW+EA+ I R ++A P++ILPYS+ G MG++ + M Sbjct: 65 PMKRIGAKGEGRFAPISWDEALDTIAARLGGIAA-RSPQAILPYSYAGTMGLVQGESMAA 123 Query: 128 RFFNALGASRLEQSICNAAGSAGWKYTMGFNGGTSPEDTVNADLIIVWGGNIVSTSMHQV 187 RFF+ LGAS L+++IC +AG+ +YT G + G E +A LI++WGGN +++++H Sbjct: 124 RFFHKLGASLLDRTICASAGATALRYTYGASLGMDIEHVQDARLILIWGGNPIASNLHFW 183 Query: 188 VYAEQARKRGAKVVVIDVHRNRTAQWADWFLPLYPGTDTALALGLMHILFRDGMTDDAFL 247 A++A++RGA +V ID +R+ TA+ L + PGTD ALAL ++H+L RD + D ++ Sbjct: 184 TRAQEAKRRGATLVAIDPYRSLTAEKCHRHLAVRPGTDAALALAMIHVLIRDDLLDHGYI 243 Query: 248 ERYTIGHEELRSHVLAYPPERVAEITGIAAADIEKLAKLYGEAKVSH-----IHIGNGLQ 302 +T+G E LR Y PE A + GI AADIE LA LYG V I + G+Q Sbjct: 244 ADHTLGFEALRERARQYTPEYAAALCGIDAADIEWLATLYGTTAVRERQPVAIRLNYGMQ 303 Query: 303 HHDNGGMNVRTIACLPALTGAWLKTXXXXXXXXXXYSSTNDRALTRPDLXXX--XXXXXX 360 GG VR +ACLP+L GAW + + AL RPDL Sbjct: 304 RAHGGGQGVRAVACLPSLVGAWRAPAGGLQLSTSGFFPIDTAALQRPDLLPGWPAQPRTL 363 Query: 361 XXXXXGEALELKEQPVMG-----MFVYCSNPVVVAPDAERVRKGFAREDLFTVVHDLFMT 415 G+AL G + VY SNPV VAP++ +V GFAREDLFTVV + F T Sbjct: 364 NMSTIGDALLHPGDASFGPKVEAVVVYNSNPVAVAPESRKVAAGFAREDLFTVVLEHFRT 423 Query: 416 DTALYADIVLPATSTFENVDLYTSYWHHYIQLQEPVLDAPGECKSNVEVFSLLGKAMGLD 475 DTA YADI+LPAT+ E+VD++ +Y H Y+ + G+ N E+F L + MG Sbjct: 424 DTADYADILLPATTQLEHVDVHKAYGHTYMLANNAAIAPLGQALPNTEIFRRLAQRMGFA 483 Query: 476 AEAFSESPYDMIRQALDY--PRNPYLNGVTLERLTAERFVKLDMSPQADYL-DNLPTPSG 532 F++S D+ QAL P +++ TL+R ++ P A + TPSG Sbjct: 484 DPCFADSDDDIAAQALRRGDPSAAHIDWATLKRAGWQKLAH----PAAPFARGGFRTPSG 539 Query: 533 KIELYSKAMELAGLPPLPTYTPLKEGYDGQQRPQPGTAYPLMFVSPPNHNFLNSTFSNVE 592 + E YS+ M GL PLP + P E P+ YPL +SPP NFLNSTF NV+ Sbjct: 540 RCEFYSEQMARDGLDPLPGHVPPHE--SPVSAPELARRYPLSMISPPARNFLNSTFVNVD 597 Query: 593 KHQRMEKRPTLQIHPEDAAVRGIGEGDGLTVYNGRGSIELWAMVTDKMLPGTVISQGLWW 652 + E P L IHP DA RG+ +G + V+N RG++ A VTD+ PG V+ +WW Sbjct: 598 SLRNTEGEPHLDIHPADAHARGVADGSMVRVFNDRGTMHARARVTDRARPGVVVGLSIWW 657 Query: 653 EGKG-HKQRVNVLTPDRLADMGNGATFFSTTVEV 685 + N LT RL DMG TF+ VEV Sbjct: 658 KKLAPDGTNANELTSQRLTDMGRAPTFYDCLVEV 691 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.318 0.136 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,089,665,804 Number of extensions: 47710859 Number of successful extensions: 116886 Number of sequences better than 1.0e-05: 1147 Number of HSP's gapped: 114923 Number of HSP's successfully gapped: 1426 Length of query: 701 Length of database: 757,237,578 Length adjustment: 133 Effective length of query: 568 Effective length of database: 396,129,411 Effective search space: 225001505448 Effective search space used: 225001505448 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)