BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0064.0001.p (460 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_391557.1| UDP-N-acetylglucosamine 1-carboxyvinyltransfera... 539 e-152 ref|NP_244616.1| UDP-N-acetylglucosamine 1-carboxyvinyltransfera... 536 e-151 ref|NP_653743.1| EPSP_syntase, EPSP synthase (3-phosphoshikimate... 510 e-143 ref|NP_981704.1| UDP-N-acetylglucosamine 1-carboxyvinyltransfera... 505 e-142 ref|NP_834951.1| UDP-N-acetylglucosamine 1-carboxyvinyltransfera... 504 e-141 >ref|NP_391557.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus subtilis] sp|P70965|MUA1_BACSU UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1) pir||A69662 UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA - Bacillus subtilis emb|CAB03688.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus subtilis] emb|CAB15693.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus subtilis subsp. subtilis str. 168] Length = 436 Score = 539 bits (1388), Expect = e-152, Method: Compositional matrix adjust. Identities = 265/422 (62%), Positives = 322/422 (76%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 M K IVRGG +L G+VKV GAKN+VLP+IAASLLA E SVI D P L DV TI++VL Sbjct: 1 MEKIIVRGGQKLNGTVKVEGAKNAVLPVIAASLLASEEKSVICDVPTLSDVYTINEVLRH 60 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 LGA V ++N+ + V+A EAP+E+VRKMRAS LVMGPLL+R GH R++LPGGCAIG Sbjct: 61 LGADVHFENNEVTVNASYALQTEAPFEYVRKMRASVLVMGPLLARTGHARVALPGGCAIG 120 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 +RPIDQHLKGFEA+GAEI +G G+IEA+ GRL+GAK+YLD SVGATEN++MAAALAEG Sbjct: 121 SRPIDQHLKGFEAMGAEIKVGNGFIEAEVKGRLQGAKIYLDFPSVGATENLIMAAALAEG 180 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TT +EN AKEPEIVDLANY+N I+IEGVE+LHGVKHH+IPDRIEAGT+ Sbjct: 181 TTTLENVAKEPEIVDLANYINGMGGKIRGAGTGTIKIEGVEKLHGVKHHIIPDRIEAGTF 240 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 M AAAIT G+V V+GA+ +HL +IAKMEEMGVTI + G+RVI K LK +D+KT+P+ Sbjct: 241 MVAAAITEGNVLVKGAVPEHLTSLIAKMEEMGVTIKDEGEGLRVIGPKELKPIDIKTMPH 300 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQSQMMALLLR+ GTS++TETVFENRFMH +EF MN +IKIEGRS I+ G Sbjct: 301 PGFPTDMQSQMMALLLRASGTSMITETVFENRFMHAEEFRRMNGDIKIEGRSVIINGPVQ 360 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRISME 420 L GA+V ATDLR T V+ H+DRGYV+ +KL+ LGADI R++ E Sbjct: 361 LQGAEVAATDLRAGAALILAGLVAEGHTRVTELKHLDRGYVDFHQKLAALGADIERVNDE 420 Query: 421 ES 422 + Sbjct: 421 SA 422 >ref|NP_244616.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus halodurans] sp|Q9K6I0|MUA1_BACHD UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1) pir||E84118 UDP-N-acetylglucosamine 1-carboxyvinyltransferase murA [imported] - Bacillus halodurans (strain C-125) dbj|BAB07468.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus halodurans] Length = 440 Score = 536 bits (1380), Expect = e-151, Method: Compositional matrix adjust. Identities = 271/432 (62%), Positives = 322/432 (74%), Gaps = 5/432 (1%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 M K IVRGG +L+GSVKV GAKN+VLP+IAAS+LA G S I D P L DV T+ +VL + Sbjct: 1 MEKIIVRGGRQLSGSVKVEGAKNAVLPVIAASILASRGTSKIYDVPKLADVYTMKEVLRN 60 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 L V Y+N V+A N EAP+E+VRKMRASFLVMGPLL+R+GH RI+LPGGCAIG Sbjct: 61 LNINVEYENGEFVVNATNPLKTEAPFEYVRKMRASFLVMGPLLARVGHARIALPGGCAIG 120 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 +RPIDQHLKGFEA+GA + +G G+IEAK GRL+G K+YLD SVGATENIMMAAA+AEG Sbjct: 121 SRPIDQHLKGFEAMGATVEIGNGFIEAKVEGRLQGTKIYLDFPSVGATENIMMAAAMAEG 180 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TT++ENAA+EPEIV LANYLN IRIEGV+ L G +H VI DRIEAGT+ Sbjct: 181 TTILENAAEEPEIVCLANYLNAMGAKVRGAGTGVIRIEGVDELVGAEHTVISDRIEAGTF 240 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 M AAAITGGDV++EGA+A+HL P+IAKM EMGV I ++NG+RVI LK VD+KT+P+ Sbjct: 241 MVAAAITGGDVFIEGAVAEHLRPLIAKMHEMGVKTIEEDNGIRVIGPDELKPVDIKTMPH 300 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQSQMMALLLR+ GTSV+TETVFENRFMHV+EF MN IKIEGRSAI++G Sbjct: 301 PGFPTDMQSQMMALLLRANGTSVITETVFENRFMHVEEFRRMNGNIKIEGRSAIISGPCQ 360 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRI--- 417 L GA+V ATDLR T V H+DRGYV+LA KL+ LGADI R+ Sbjct: 361 LQGAEVTATDLRAGAALVLAGLVADGHTRVVELKHVDRGYVDLAGKLARLGADIERVVET 420 Query: 418 --SMEESGAAAP 427 +E A AP Sbjct: 421 EHELENLDAPAP 432 >ref|NP_653743.1| EPSP_syntase, EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) [Bacillus anthracis A2012] ref|NP_847687.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 [Bacillus anthracis str. Ames] gb|AAP29173.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 [Bacillus anthracis str. Ames] Length = 434 Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust. Identities = 252/418 (60%), Positives = 316/418 (75%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 M K IVRGG RL G+V+V GAKN+VLPIIAA+LLA +G +V+ + P L DV TI++VL Sbjct: 1 MEKIIVRGGKRLNGTVRVEGAKNAVLPIIAAALLASDGKNVLSEVPVLSDVYTINEVLRH 60 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 L A V ++N+ + +DA + EAP+E+VRKMRAS VMGPLL+R G RI+LPGGCAIG Sbjct: 61 LNAEVVFENNQVTIDASKELNIEAPFEYVRKMRASVQVMGPLLARNGRARIALPGGCAIG 120 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 +RPIDQHLKGFEA+GA++ +G G++EA G L+GAK+YLD SVGATENIM AA LA+G Sbjct: 121 SRPIDQHLKGFEAMGAKVQVGNGFVEAYVEGELKGAKIYLDFPSVGATENIMSAATLAKG 180 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TT++ENAAKEPEIVDLAN+LN IRIEGV++L+G H +IPDRIEAGT+ Sbjct: 181 TTILENAAKEPEIVDLANFLNAMGAKVRGAGTGTIRIEGVDKLYGANHSIIPDRIEAGTF 240 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 M AAAITGGD+ +E A+ +HL + AKMEEMGV II + GVRVI LKAVD+KT+P+ Sbjct: 241 MVAAAITGGDILIENAVPEHLRSITAKMEEMGVKIIEENEGVRVIGPDKLKAVDIKTMPH 300 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQSQMMALLL+++GTS++TETVFENRFMHV+EF MNA+IKIEGRS I+ G + Sbjct: 301 PGFPTDMQSQMMALLLQADGTSMITETVFENRFMHVEEFRRMNADIKIEGRSVIMNGPNS 360 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRIS 418 L GA+V ATDLR T V+ H+DRGYV+ +KL+ LGA I R++ Sbjct: 361 LQGAEVGATDLRAAAALILAGLVSEGYTRVTELKHLDRGYVDFHKKLAALGATIERVN 418 >ref|NP_981704.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 [Bacillus cereus ATCC 10987] gb|AAS44312.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 [Bacillus cereus ATCC 10987] Length = 434 Score = 505 bits (1301), Expect = e-142, Method: Compositional matrix adjust. Identities = 253/418 (60%), Positives = 316/418 (75%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 M K IVRGG RL G+V+V GAKN+VLPIIAA+LLA +G +V+ + P L DV TI++VL Sbjct: 1 MEKIIVRGGKRLNGTVRVEGAKNAVLPIIAAALLASDGKNVLSEVPVLSDVYTINEVLRH 60 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 L A V ++N+ + +DA + EAP+E+VRKMRAS VMGPLL+R G RI+LPGGCAIG Sbjct: 61 LNAEVVFENNQVTIDASKELNIEAPFEYVRKMRASVQVMGPLLARNGRARIALPGGCAIG 120 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 +RPIDQHLKGFEA+GA++ +G G++EA G L+GAK+YLD SVGATENIM AA LA+G Sbjct: 121 SRPIDQHLKGFEAMGAKVQVGNGFVEAYVEGELKGAKIYLDFPSVGATENIMSAATLAKG 180 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TT++ENAAKEPEIVDLAN+LN IRIEGV++L+G H +IPDRIEAGT+ Sbjct: 181 TTILENAAKEPEIVDLANFLNAMGAKVRGAGTGTIRIEGVDKLYGANHSIIPDRIEAGTF 240 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 M AAAITGGD+ +E A+ +HL + AKMEEMGV II + GVRVI LKAVD+KT+P+ Sbjct: 241 MVAAAITGGDILIENAVPEHLRSITAKMEEMGVKIIEENEGVRVIGPDKLKAVDIKTMPH 300 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQSQMMALLL+++GTS++TETVFENRFMHV+EF MNA+IKIEGRS I+ G + Sbjct: 301 PGFPTDMQSQMMALLLQADGTSMITETVFENRFMHVEEFRRMNADIKIEGRSVIMNGPNS 360 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRIS 418 L GA+V ATDLR T V+ H+DRGYVN +KL+ LGA I R++ Sbjct: 361 LQGAEVAATDLRAAAALILAGLVSEGYTRVTELKHLDRGYVNFHKKLAALGATIERVN 418 >ref|NP_834951.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus cereus ATCC 14579] gb|AAP12152.1| UDP-N-acetylglucosamine 1-carboxyvinyltransferase [Bacillus cereus ATCC 14579] Length = 434 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 252/418 (60%), Positives = 316/418 (75%) Query: 1 MSKFIVRGGNRLTGSVKVSGAKNSVLPIIAASLLAEEGVSVIVDAPPLDDVMTISKVLES 60 M K IVRGG RL G+V+V GAKN+VLPIIAA+LLA +G +V+ + P L DV TI++VL Sbjct: 1 MEKIIVRGGKRLNGTVRVEGAKNAVLPIIAAALLASDGKNVLSEVPVLSDVYTINEVLRH 60 Query: 61 LGAGVTYQNDVIEVDARNITSYEAPYEWVRKMRASFLVMGPLLSRLGHTRISLPGGCAIG 120 L A V ++N+ + +D+ + EAP+E+VRKMRAS VMGPLL+R G RI+LPGGCAIG Sbjct: 61 LNAEVVFENNQVTIDSSKELNIEAPFEYVRKMRASVQVMGPLLARNGRARIALPGGCAIG 120 Query: 121 TRPIDQHLKGFEALGAEISLGQGYIEAKSNGRLRGAKVYLDVASVGATENIMMAAALAEG 180 +RPIDQHLKGFEA+GA++ +G G++EA G L+GAK+YLD SVGATENIM AA LA+G Sbjct: 121 SRPIDQHLKGFEAMGAKVQVGNGFVEAYVEGELKGAKIYLDFPSVGATENIMSAATLAKG 180 Query: 181 TTVIENAAKEPEIVDLANYLNXXXXXXXXXXXXXIRIEGVERLHGVKHHVIPDRIEAGTY 240 TT++ENAAKEPEIVDLAN+LN IRIEGV++L+G H +IPDRIEAGT+ Sbjct: 181 TTILENAAKEPEIVDLANFLNAMGAKVRGAGTGTIRIEGVDKLYGANHSIIPDRIEAGTF 240 Query: 241 MAAAAITGGDVYVEGAIADHLGPVIAKMEEMGVTIIPDENGVRVISDKPLKAVDLKTLPY 300 M AAAITGGD+ +E A+ +HL + AKMEEMGV II + GVRVI LKAVD+KT+P+ Sbjct: 241 MVAAAITGGDILIENAVPEHLRSITAKMEEMGVKIIEENEGVRVIGPDKLKAVDIKTMPH 300 Query: 301 PGFPTDMQSQMMALLLRSEGTSVVTETVFENRFMHVDEFHNMNAEIKIEGRSAIVTGNAA 360 PGFPTDMQSQMMALLL+++GTS++TETVFENRFMHV+EF MNA+IKIEGRS I+ G + Sbjct: 301 PGFPTDMQSQMMALLLQADGTSMITETVFENRFMHVEEFRRMNADIKIEGRSVIMNGPNS 360 Query: 361 LVGAKVCATDLRXXXXXXXXXXXXXXTTEVSGTHHIDRGYVNLAEKLSGLGADIWRIS 418 L GA+V ATDLR T V+ H+DRGYVN +KL+ LGA I R++ Sbjct: 361 LQGAEVAATDLRAAAALILAGLVSEGYTRVTELKHLDRGYVNFHKKLAALGATIERVN 418 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.316 0.133 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 608,527,080 Number of extensions: 23599362 Number of successful extensions: 67099 Number of sequences better than 1.0e-05: 891 Number of HSP's gapped: 65529 Number of HSP's successfully gapped: 894 Length of query: 460 Length of database: 757,237,578 Length adjustment: 129 Effective length of query: 331 Effective length of database: 406,989,807 Effective search space: 134713626117 Effective search space used: 134713626117 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 128 (53.9 bits)