BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0060.0006.p (684 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_654014.1| Peptidase_M41, Peptidase family M41 [Bacillus a... 762 0.0 ref|NP_976391.1| cell division protein FtsH [Bacillus cereus ATC... 760 0.0 ref|NP_829967.1| Cell division protein ftsH [Bacillus cereus ATC... 756 0.0 sp|P94304|FTSH_BACPF Cell division protein ftsH homolog >gi|1813... 745 0.0 ref|NP_240951.1| cell-division protein (ATP-dependent Zn metallo... 743 0.0 >ref|NP_654014.1| Peptidase_M41, Peptidase family M41 [Bacillus anthracis A2012] ref|NP_842633.1| cell division protein FtsH [Bacillus anthracis str. Ames] gb|AAP24119.1| cell division protein FtsH [Bacillus anthracis str. Ames] Length = 633 Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/654 (60%), Positives = 469/654 (71%), Gaps = 27/654 (4%) Query: 1 MNRFIRNSGFYLILFLVVVGIVQFVSNGNESADFPRYDELRQEIKNNNVKSMTIQFEGNA 60 MNR RN+ FYL++FLVV+GIV + + + YD+ +++ V+++ +Q + Sbjct: 1 MNRIFRNTIFYLLIFLVVIGIVSYFNGSTQKTTSVSYDKFITKLEKGEVRNVQLQPKNGV 60 Query: 61 FAVTGEYKQQPAEAKSKNFSTFVPPTDRALDELIAASDD--NGIELTQKKMEGDSIWLTF 118 F V G++ ++ + F T+ P T+ EL +D G E+ + E S W+TF Sbjct: 61 FEVKGQFNNS---SQGEQFVTYAPNTE----ELQKKINDKAQGAEVKYQPAEETSAWVTF 113 Query: 119 LSSXXXXXXXXXXXXXXXNQAQGGGGKVMNFGKSKARLYNEEKKKISFEDVAGADEEKQE 178 +S NQAQGGG +VMNFGKSKA+LYN+EKKK+ F DVAGADEEKQE Sbjct: 114 FTSIIPFVIIFILFFFLLNQAQGGGSRVMNFGKSKAKLYNDEKKKVRFRDVAGADEEKQE 173 Query: 179 LVEVVEFLKDPRKFAAVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE 238 LVEVVEFLKDPRKFA VGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE Sbjct: 174 LVEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE 233 Query: 239 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVXXXXXXXXXXXHDEREQTLNQLLVEMD 298 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAV HDEREQTLNQLLVEMD Sbjct: 234 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMD 293 Query: 299 GFGGNEGIIIVAATNRADILDPALLRPGRFDRQITVDRPDVKGREAVLKVHSRNKPLTKD 358 GFG NEGIII+AATNR DILDPALLRPGRFDRQITVDRPDV GREAVLKVH+RNKPL ++ Sbjct: 294 GFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVLKVHARNKPLDEN 353 Query: 359 VRLDVIAKRTTGFTGADXXXXXXXXXXXXXXXXXKDISMTEVDEAIDRVIVGTEKRSRVI 418 + L IA RT GF+GAD K I M+++DEA DRVI G K+SRVI Sbjct: 354 INLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSDIDEATDRVIAGPAKKSRVI 413 Query: 419 SEREKRIVAYHEAGHTIVGYFLEHADMVHKVTIIPRGRAGGYVIMLPKEDRMLVTKQELL 478 SE+E+ IVA+HEAGHT++G L+ AD+VHKVTI+PRG+AGGY +MLPKEDR +TK ELL Sbjct: 414 SEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIVPRGQAGGYAVMLPKEDRYFMTKPELL 473 Query: 479 DKVTGLLGGRVAEELFIGEIGTGAYSDFQQATRIVRSMIMEYGMSDKLGPMQFGTSQ-GQ 537 DK+TGLLGGRVAEE+ GE+ TGA++DFQ+AT I R M+ E+GMSDKLGPMQFG+SQ GQ Sbjct: 474 DKITGLLGGRVAEEIVFGEVSTGAHNDFQRATGIARRMVTEFGMSDKLGPMQFGSSQGGQ 533 Query: 538 VFLGRDIGHEQNYSDSIAYEIDQEMQNFIRSSYERCKELLTKYSKEMHLIANTLLEKETL 597 VFLGRD EQNYSD+IA+EID EMQ ++ Y R K++LT ++ LIA TLLE ETL Sbjct: 534 VFLGRDFHSEQNYSDAIAHEIDMEMQTIMKECYARAKQILTDNRDKLDLIAKTLLEVETL 593 Query: 598 ELDQIKELIEQGYLTEDGKPEDAAGVTHEEGEPVIDSIGDVRVRIQGKTDDTPS 651 + +QI L + G L E +P +A DV+V I K DD S Sbjct: 594 DAEQINHLCDYGRLPE--RPTSSA---------------DVKVNINMKKDDEES 630 >ref|NP_976391.1| cell division protein FtsH [Bacillus cereus ATCC 10987] gb|AAS38999.1| cell division protein FtsH [Bacillus cereus ATCC 10987] Length = 633 Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/654 (59%), Positives = 470/654 (71%), Gaps = 27/654 (4%) Query: 1 MNRFIRNSGFYLILFLVVVGIVQFVSNGNESADFPRYDELRQEIKNNNVKSMTIQFEGNA 60 MNR RN+ FYL++FLVV+GIV + + + YD+ +++ V+++ +Q + Sbjct: 1 MNRIFRNTIFYLLIFLVVIGIVSYFNGSTQKTTSVSYDKFITKLEKGEVRNVQLQPKNGV 60 Query: 61 FAVTGEYKQQPAEAKSKNFSTFVPPTDRALDELIAASDD--NGIELTQKKMEGDSIWLTF 118 F V G++ ++ + F T+ P T+ EL +D G E+ + E S W+TF Sbjct: 61 FEVKGQFNNS---SQGEQFVTYAPNTE----ELQKKINDKAQGAEVKYQPAEETSAWVTF 113 Query: 119 LSSXXXXXXXXXXXXXXXNQAQGGGGKVMNFGKSKARLYNEEKKKISFEDVAGADEEKQE 178 +S NQAQGGG +VMNFGKSKA+LYN+EKKK+ F DVAGADEEKQE Sbjct: 114 FTSIIPFVIIFILFFFLLNQAQGGGSRVMNFGKSKAKLYNDEKKKVRFRDVAGADEEKQE 173 Query: 179 LVEVVEFLKDPRKFAAVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE 238 LVEVVEFLKDPRKFA VGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE Sbjct: 174 LVEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE 233 Query: 239 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVXXXXXXXXXXXHDEREQTLNQLLVEMD 298 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAV HDEREQTLNQLLVEMD Sbjct: 234 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMD 293 Query: 299 GFGGNEGIIIVAATNRADILDPALLRPGRFDRQITVDRPDVKGREAVLKVHSRNKPLTKD 358 GFG NEGIII+AATNR DILDPALLRPGRFDRQITVDRPDV GREAVLKVH+RNKPL ++ Sbjct: 294 GFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVLKVHARNKPLDEN 353 Query: 359 VRLDVIAKRTTGFTGADXXXXXXXXXXXXXXXXXKDISMTEVDEAIDRVIVGTEKRSRVI 418 + L IA RT GF+GAD K I M+++DEA DRVI G K+SRVI Sbjct: 354 INLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSDIDEATDRVIAGPAKKSRVI 413 Query: 419 SEREKRIVAYHEAGHTIVGYFLEHADMVHKVTIIPRGRAGGYVIMLPKEDRMLVTKQELL 478 SE+E+ IVA+HEAGHT++G L+ AD+VHKVTI+PRG+AGGY +MLPKEDR +TK ELL Sbjct: 414 SEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIVPRGQAGGYAVMLPKEDRYFMTKPELL 473 Query: 479 DKVTGLLGGRVAEELFIGEIGTGAYSDFQQATRIVRSMIMEYGMSDKLGPMQFGTSQ-GQ 537 DK+TGLLGGRVAEE+ GE+ TGA++DFQ+AT I R M+ E+GMSDKLGPMQFG+SQ GQ Sbjct: 474 DKITGLLGGRVAEEIVFGEVSTGAHNDFQRATGIARRMVTEFGMSDKLGPMQFGSSQGGQ 533 Query: 538 VFLGRDIGHEQNYSDSIAYEIDQEMQNFIRSSYERCKELLTKYSKEMHLIANTLLEKETL 597 VFLGRD EQNYSD+IA++ID EMQ ++ Y R K++LT+ ++ LIA TLLE ETL Sbjct: 534 VFLGRDFHSEQNYSDAIAHDIDVEMQTIMKECYARAKDILTENRDKLDLIAKTLLEVETL 593 Query: 598 ELDQIKELIEQGYLTEDGKPEDAAGVTHEEGEPVIDSIGDVRVRIQGKTDDTPS 651 + +QI L + G L E +P +A DV+V I K DD S Sbjct: 594 DAEQINHLCDYGRLPE--RPTSSA---------------DVKVNINMKKDDEES 630 >ref|NP_829967.1| Cell division protein ftsH [Bacillus cereus ATCC 14579] gb|AAP07168.1| Cell division protein ftsH [Bacillus cereus ATCC 14579] Length = 633 Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/616 (62%), Positives = 458/616 (74%), Gaps = 10/616 (1%) Query: 1 MNRFIRNSGFYLILFLVVVGIVQFVSNGNESADFPRYDELRQEIKNNNVKSMTIQFEGNA 60 MNR RN+ FYL++FLVV+GIV + + + YD+ ++++ V+++ +Q + Sbjct: 1 MNRIFRNTIFYLLIFLVVIGIVSYFNGSTQKTTSVSYDKFITKLESGEVRNVQLQPKNGV 60 Query: 61 FAVTGEYKQQPAEAKSKNFSTFVPPTDRALDELIAASDDN--GIELTQKKMEGDSIWLTF 118 F V G++ ++ + F T+ P T+ EL +D G E+ + E S W+TF Sbjct: 61 FEVKGQFNNS---SQGEQFVTYAPNTE----ELQKKINDKAKGAEVKYQPAEETSAWVTF 113 Query: 119 LSSXXXXXXXXXXXXXXXNQAQGGGGKVMNFGKSKARLYNEEKKKISFEDVAGADEEKQE 178 +S NQAQGGG +VMNFGKSKA+LYN+EKKK+ F DVAGADEEKQE Sbjct: 114 FTSIIPFVIIFILFFFLLNQAQGGGSRVMNFGKSKAKLYNDEKKKVRFRDVAGADEEKQE 173 Query: 179 LVEVVEFLKDPRKFAAVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE 238 LVEVVEFLKDPRKF+ VGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE Sbjct: 174 LVEVVEFLKDPRKFSEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE 233 Query: 239 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVXXXXXXXXXXXHDEREQTLNQLLVEMD 298 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAV HDEREQTLNQLLVEMD Sbjct: 234 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMD 293 Query: 299 GFGGNEGIIIVAATNRADILDPALLRPGRFDRQITVDRPDVKGREAVLKVHSRNKPLTKD 358 GFG NEGIIIVAATNR DILDPALLRPGRFDRQITVDRPDV GREAVLKVH+RNKPL + Sbjct: 294 GFGANEGIIIVAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVLKVHARNKPLDEH 353 Query: 359 VRLDVIAKRTTGFTGADXXXXXXXXXXXXXXXXXKDISMTEVDEAIDRVIVGTEKRSRVI 418 + L IA RT GF+GAD K I M+++DEA DRVI G K+SRVI Sbjct: 354 INLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSDIDEATDRVIAGPAKKSRVI 413 Query: 419 SEREKRIVAYHEAGHTIVGYFLEHADMVHKVTIIPRGRAGGYVIMLPKEDRMLVTKQELL 478 SE+E+ IVA+HEAGHT++G L+ AD+VHKVTI+PRG+AGGY +MLPKEDR +TK ELL Sbjct: 414 SEKERNIVAFHEAGHTVIGVVLDEADVVHKVTIVPRGQAGGYAVMLPKEDRYFMTKPELL 473 Query: 479 DKVTGLLGGRVAEELFIGEIGTGAYSDFQQATRIVRSMIMEYGMSDKLGPMQFGTSQ-GQ 537 DK+TGLLGGRVAEE+ GE+ TGA++DFQ+AT I R M+ E+GMSDKLGPMQFG+SQ GQ Sbjct: 474 DKITGLLGGRVAEEIVFGEVSTGAHNDFQRATGIARRMVTEFGMSDKLGPMQFGSSQGGQ 533 Query: 538 VFLGRDIGHEQNYSDSIAYEIDQEMQNFIRSSYERCKELLTKYSKEMHLIANTLLEKETL 597 VFLGRD EQNYSD+IA+EID EMQ+ ++ Y R K++LT+ ++ +IA TLLE ETL Sbjct: 534 VFLGRDFHSEQNYSDAIAHEIDMEMQSIMKECYARAKQILTENRDKLDIIAQTLLEVETL 593 Query: 598 ELDQIKELIEQGYLTE 613 + +QI L + G L E Sbjct: 594 DAEQINHLCDYGRLPE 609 >sp|P94304|FTSH_BACPF Cell division protein ftsH homolog gb|AAB41679.1| cell division protein Length = 679 Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/669 (57%), Positives = 474/669 (70%), Gaps = 14/669 (2%) Query: 1 MNRFIRNSGFYLILFLVVVGIVQFVSNGNESADFPRYDELRQEIKNNNVKSMTIQFEGNA 60 MNR RN+ FYL++FLV+VGIV ++ + ++E + ++N V+ ++++ E Sbjct: 1 MNRIFRNTIFYLLIFLVIVGIVSVFNSDQTETENVSFNEFAERLENGQVQELSVKPERQV 60 Query: 61 FAVTGEYKQQPAEAKSKNFSTFVPPTDRALDELIAASDDNGIELTQKKMEGD--SIWLTF 118 + V G++ Q A+ + F T+ +++ + L A D G + D S W+ F Sbjct: 61 YLVRGQFNDQ---AEDEFFQTYALRSEQTAELLFNAEDPTGTPFNLEIEPADETSGWVQF 117 Query: 119 LSSXXXXXXXXXXXXXXXNQAQGGGGKVMNFGKSKARLYNEEKKKISFEDVAGADEEKQE 178 + +QAQGGG +VMNFGKSKA++ NE+KKK F+DVAGADEEKQE Sbjct: 118 FTGIIPFIIIFILFFFLLSQAQGGGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQE 177 Query: 179 LVEVVEFLKDPRKFAAVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE 238 LVEVVEFLKDPRKF+A+GARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE Sbjct: 178 LVEVVEFLKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVE 237 Query: 239 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVXXXXXXXXXXXHDEREQTLNQLLVEMD 298 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAV HDEREQTLNQLLVEMD Sbjct: 238 MFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMD 297 Query: 299 GFGGNEGIIIVAATNRADILDPALLRPGRFDRQITVDRPDVKGREAVLKVHSRNKPLTKD 358 GF NEGIII+AATNRADILDPALLRPGRFDRQI V+RPDV GRE VLKVH+RNKPL D Sbjct: 298 GFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDD 357 Query: 359 VRLDVIAKRTTGFTGADXXXXXXXXXXXXXXXXXKDISMTEVDEAIDRVIVGTEKRSRVI 418 V L IA RT GF+GAD ISM ++EAIDRVI G K+SRVI Sbjct: 358 VNLKTIATRTPGFSGADLENLLNEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVI 417 Query: 419 SEREKRIVAYHEAGHTIVGYFLEHADMVHKVTIIPRGRAGGYVIMLPKEDRMLVTKQELL 478 S +EK+IVA+HEAGHT+VG LE+ADMVHKVTI+PRG AGGY +MLPKEDR +T+ ELL Sbjct: 418 SPKEKKIVAWHEAGHTVVGVKLENADMVHKVTIVPRGMAGGYAVMLPKEDRYFMTQPELL 477 Query: 479 DKVTGLLGGRVAEELFIGEIGTGAYSDFQQATRIVRSMIMEYGMSDKLGPMQF-GTSQGQ 537 DK+ GLLGGRVAEE+ GE+ TGA++DFQ+AT I R M+ EYGMS+KLGPMQF S GQ Sbjct: 478 DKIIGLLGGRVAEEVTFGEVSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQ 537 Query: 538 VFLGRDIGHEQNYSDSIAYEIDQEMQNFIRSSYERCKELLTKYSKEMHLIANTLLEKETL 597 VFLGRDI +EQNYSD+IA+EID E+Q I+ Y RCK++L + + L+A TLL+ ETL Sbjct: 538 VFLGRDIQNEQNYSDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETL 597 Query: 598 ELDQIKELIEQGYLTEDGKPEDAAGVTHEEGEPVIDSIGDVRVRIQGKTDDTPSTIGDLS 657 + +QIK L+ +G L P+D H E E +S DV+V I K ++TP + Sbjct: 598 DAEQIKSLVHEGKL-----PDDHHLNAHPEKEKASES--DVKVNINSKKEETPQVEAEQP 650 Query: 658 KDIPNNPDP 666 ++ PN +P Sbjct: 651 QE-PNTDEP 658 >ref|NP_240951.1| cell-division protein (ATP-dependent Zn metallopeptidase) [Bacillus halodurans] pir||E83660 cell-division protein (ATP-dependent Zn metallopeptidase) ftsH [imported] - Bacillus halodurans (strain C-125) dbj|BAB03804.1| cell-division protein (ATP-dependent Zn metallopeptidase) [Bacillus halodurans] Length = 657 Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/630 (60%), Positives = 460/630 (73%), Gaps = 9/630 (1%) Query: 1 MNRFIRNSGFYLILFLVVVGIVQFVSNGNESADFPRYDELRQEIKNNNVKSMTIQFEGNA 60 MNR RN+ FYL++FLV+VGIV F + ++E Q ++ + S++I+ E + Sbjct: 1 MNRIFRNTIFYLLIFLVIVGIVSFFTGDQTQTKQITFEEFTQHLEAGEITSLSIKPERDV 60 Query: 61 FAVTGEYKQQPAEAKSKNFSTFVPPTDRALDELIAASDDNGIELTQKKMEGDSIWLTFLS 120 + V G+ + + + F T+V PT++ + + S+ G+++ + S W+TF + Sbjct: 61 YLVRGQLR---GADEDEFFETYVLPTEQMAETI---SEAAGLQVI--PADETSGWVTFFT 112 Query: 121 SXXXXXXXXXXXXXXXNQAQGGGGKVMNFGKSKARLYNEEKKKISFEDVAGADEEKQELV 180 +QAQGGG +VMNFGKSKA++ NE+KKK F+DVAGADEEKQELV Sbjct: 113 GIIPFIIIFILFFFLLSQAQGGGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELV 172 Query: 181 EVVEFLKDPRKFAAVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMF 240 EVVEFLKDPRKF+A+GARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMF Sbjct: 173 EVVEFLKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMF 232 Query: 241 VGVGASRVRDLFENAKKNAPCIIFIDEIDAVXXXXXXXXXXXHDEREQTLNQLLVEMDGF 300 VGVGASRVRDLFENAKKNAPCIIFIDEIDAV HDEREQTLNQLLVEMDGF Sbjct: 233 VGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGF 292 Query: 301 GGNEGIIIVAATNRADILDPALLRPGRFDRQITVDRPDVKGREAVLKVHSRNKPLTKDVR 360 NEGIII+AATNRADILDPALLRPGRFDRQITV RPDVKGRE VLKVH+ NKPL DV Sbjct: 293 SANEGIIIIAATNRADILDPALLRPGRFDRQITVGRPDVKGREEVLKVHASNKPLADDVN 352 Query: 361 LDVIAKRTTGFTGADXXXXXXXXXXXXXXXXXKDISMTEVDEAIDRVIVGTEKRSRVISE 420 L IA RT GF+GAD K ISM ++EAIDRVI G K+SRVISE Sbjct: 353 LKTIATRTPGFSGADLENLLNEAALVAARQDEKKISMVHIEEAIDRVIAGPAKKSRVISE 412 Query: 421 REKRIVAYHEAGHTIVGYFLEHADMVHKVTIIPRGRAGGYVIMLPKEDRMLVTKQELLDK 480 +EK IVA+HEAGHT+VG LE+ADMVHKVTI+PRG AGGY +MLPKEDR +TK ELLDK Sbjct: 413 KEKNIVAWHEAGHTVVGVKLENADMVHKVTIVPRGVAGGYAVMLPKEDRYFMTKPELLDK 472 Query: 481 VTGLLGGRVAEELFIGEIGTGAYSDFQQATRIVRSMIMEYGMSDKLGPMQFGT-SQGQVF 539 + GLLGGRVAEE+ GE TGA++DFQ+AT I R M+ EYGMS+KLGPMQFG+ S GQVF Sbjct: 473 IVGLLGGRVAEEIQFGEASTGAHNDFQRATSIARKMVTEYGMSEKLGPMQFGSGSGGQVF 532 Query: 540 LGRDIGHEQNYSDSIAYEIDQEMQNFIRSSYERCKELLTKYSKEMHLIANTLLEKETLEL 599 LGRDI +EQNYSD+IA+EID E+Q I+ YERCK++L K + L+A TLL+ ETL+ Sbjct: 533 LGRDIQNEQNYSDAIAHEIDLEVQRIIKECYERCKQILLDNKKSLDLVAETLLDLETLDA 592 Query: 600 DQIKELIEQGYLTEDGKPEDAAGVTHEEGE 629 +QIK LI G L ++ + T E G+ Sbjct: 593 EQIKSLIHDGKLPDNHHLAEKIAETRENGQ 622 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.317 0.137 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 928,949,846 Number of extensions: 38760073 Number of successful extensions: 150586 Number of sequences better than 1.0e-05: 2570 Number of HSP's gapped: 146799 Number of HSP's successfully gapped: 2758 Length of query: 684 Length of database: 757,237,578 Length adjustment: 133 Effective length of query: 551 Effective length of database: 396,129,411 Effective search space: 218267305461 Effective search space used: 218267305461 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 129 (54.3 bits)