BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0039.0034.p (676 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_244568.1| beta-galactosidase [Bacillus halodurans] >gi|25... 1012 0.0 gb|AAF75984.1| beta-galactosidase [Planococcus sp. 'SOS Orange'] 1008 0.0 gb|AAA22258.1| beta-D-galactosidase 982 0.0 ref|NP_228122.1| beta-D-galactosidase [Thermotoga maritima] >gi|... 650 0.0 ref|NP_964713.1| beta-galactosidase [Lactobacillus johnsonii NCC... 613 e-174 >ref|NP_244568.1| beta-galactosidase [Bacillus halodurans] pir||E84112 beta-galactosidase BH3701 [imported] - Bacillus halodurans (strain C-125) dbj|BAB07420.1| beta-galactosidase [Bacillus halodurans] Length = 672 Score = 1012 bits (2616), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/672 (69%), Positives = 555/672 (82%), Gaps = 2/672 (0%) Query: 1 VINDKLPKIWYGGDYNPEQWDAPVWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDFS 60 +IN+KLPKIWYGGDYNPEQW+ VW ED RMFKLAGIDVAT+NVFSWAL QP E+TYDF+ Sbjct: 1 MINEKLPKIWYGGDYNPEQWEKEVWDEDIRMFKLAGIDVATLNVFSWALNQPDEETYDFT 60 Query: 61 GLDELMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSPV 120 LDE +DRLY NG Y CLATST AHPAWMA +YP+V RVD QGRKR FGGRHNS PNSP Sbjct: 61 WLDEQIDRLYENGIYTCLATSTAAHPAWMAKKYPDVLRVDYQGRKRAFGGRHNSCPNSPT 120 Query: 121 YRKFAAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALNK 180 YRK+A ++A +L ERYKDHPG++ WH+SNEYGGY Y + A+FR WL+ +YG+L +NK Sbjct: 121 YRKYAERMADRLGERYKDHPGVLIWHVSNEYGGYCYCDNCAASFRKWLQQKYGTLQNVNK 180 Query: 181 AWNTRFWGHTFYDWEEIVVPSELSEEWNGNRTNFQGISLDYRRFMSHSLLECYKLEYDAI 240 AWNTRFWGHTFYDW+EIV P+ LSEEW G+ TNFQGISLDYR F S SLLEC+KLE DA+ Sbjct: 181 AWNTRFWGHTFYDWDEIVPPNALSEEWEGDSTNFQGISLDYRIFQSDSLLECFKLERDAL 240 Query: 241 KEHSTNVPVTTNLMGFYPELDYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRGLKNG 300 K+H+ N+PVTTNLMG Y ELDYF+W K MDVVSWDNYP+ DTPVS TAM HDLMRGLK+G Sbjct: 241 KKHTPNLPVTTNLMGTYKELDYFKWGKEMDVVSWDNYPAYDTPVSFTAMAHDLMRGLKSG 300 Query: 301 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEKYHGA 360 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTV+FFQLRRS+GACEKYHGA Sbjct: 301 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVMFFQLRRSVGACEKYHGA 360 Query: 361 VIEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSGPSVA 420 VIEHVGHE+TRVFRE A LG+ELG L LLDAR A++ I++DWENRWA +LSSGPS A Sbjct: 361 VIEHVGHENTRVFRETAALGKELGNLSYALLDARVQAKVAIVFDWENRWATELSSGPSKA 420 Query: 421 LDYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFVKAGG 480 LDYV EVH YY AL+ +NI DMIGV+EDLS+Y+IVIAPVLYM+K G+A++V+ FV+ GG Sbjct: 421 LDYVKEVHNYYAALFDENIPVDMIGVDEDLSKYEIVIAPVLYMVKSGYADRVKEFVQNGG 480 Query: 481 TFVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGALNRT 540 TFVTT+FSGIVNE+DLVT+GGYPGELR +LGIW EEIDAL P N+IV++ + G+L T Sbjct: 481 TFVTTFFSGIVNEHDLVTLGGYPGELRDLLGIWVEEIDALPPEEKNQIVITNDTGSLTGT 540 Query: 541 YPCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQGFLSN 600 Y C LL D+IH+EGA+VLAEYG+DFY G P +T + +G+GKAYYV T PD AFL F+ Sbjct: 541 YECRLLFDIIHSEGADVLAEYGSDFYAGTPVITRHAYGKGKAYYVGTCPDQAFLTDFMKT 600 Query: 601 LCAEKEIQPLVSAPEGIESVQRVKDGVSYLFLLNHKEGELSADIGSVQRTDLLTGKTFSG 660 +CAEKEI PL++ P+G+E +R KDG SY F++NH + +IG + TDLLTGK +G Sbjct: 601 VCAEKEIAPLLNVPKGVEVTERRKDGASYFFIMNHNASTVELEIG--EGTDLLTGKELTG 658 Query: 661 TAVVPGRSVLIL 672 + V+I+ Sbjct: 659 ATSLEAYGVMIV 670 >gb|AAF75984.1| beta-galactosidase [Planococcus sp. 'SOS Orange'] Length = 677 Score = 1008 bits (2607), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/675 (69%), Positives = 562/675 (83%), Gaps = 2/675 (0%) Query: 1 VINDKLPKIWYGGDYNPEQWDAP-VWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDF 59 +INDKLPKIW+GGDYNPEQWD+ +W ED RMFKLAGIDVAT+NVFSWAL QP+EDTY+F Sbjct: 1 MINDKLPKIWHGGDYNPEQWDSKEIWDEDVRMFKLAGIDVATLNVFSWALNQPNEDTYNF 60 Query: 60 SGLDELMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSP 119 LDE ++RLY NG Y CLATST AHPAWMA +YP+V RVD GRKRKFG RHNS PNSP Sbjct: 61 DWLDEKINRLYENGIYTCLATSTAAHPAWMAKKYPDVLRVDFYGRKRKFGSRHNSCPNSP 120 Query: 120 VYRKFAAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALN 179 YRK++ ++A LAERYKDHP ++ WH+SNEYGGY Y + + AFR WL ++YG+L+ LN Sbjct: 121 TYRKYSERIAETLAERYKDHPAVLIWHVSNEYGGYCYCDNCQDAFRNWLSDKYGTLEKLN 180 Query: 180 KAWNTRFWGHTFYDWEEIVVPSELSEEWNGNRTNFQGISLDYRRFMSHSLLECYKLEYDA 239 KAWNT FWGHTFY+W+EIV P+ LSE+ N ++FQGISLDYRRF S LL+CYKLEY+A Sbjct: 181 KAWNTGFWGHTFYEWDEIVAPNMLSEKREDNVSDFQGISLDYRRFQSDRLLDCYKLEYNA 240 Query: 240 IKEH-STNVPVTTNLMGFYPELDYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRGLK 298 I++H T++P+TTNLMG YP LDYF+WAK MDVVSWDNYPS+DTP S+TAMTHDLMRGLK Sbjct: 241 IRKHVPTSIPITTNLMGTYPMLDYFKWAKEMDVVSWDNYPSIDTPFSYTAMTHDLMRGLK 300 Query: 299 NGQPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEKYH 358 G+PFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQA+ RGADT+L+FQLRRS+GACEKYH Sbjct: 301 GGKPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAIGRGADTILYFQLRRSVGACEKYH 360 Query: 359 GAVIEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSGPS 418 GAVIEHVGHEHTRVF E A+LG+EL L D LLDAR A++ I++DWENRWA +LSSGPS Sbjct: 361 GAVIEHVGHEHTRVFNEVAQLGQELNGLSDTLLDARVNAKVAIVFDWENRWATELSSGPS 420 Query: 419 VALDYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFVKA 478 V+LDYVNEVHKYYDALY+ N++ DMIGVEEDLS+Y +VIAPVLYM+K G+A KVE FV+ Sbjct: 421 VSLDYVNEVHKYYDALYKLNVQVDMIGVEEDLSKYDVVIAPVLYMVKEGYAAKVEKFVEN 480 Query: 479 GGTFVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGALN 538 GGTF+TT+FSGIVNE D+VT+GGYPGELRKVLGIWAEEIDAL P +N+IV+ G L+ Sbjct: 481 GGTFLTTFFSGIVNETDIVTLGGYPGELRKVLGIWAEEIDALHPDETNQIVVKGSRGILS 540 Query: 539 RTYPCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQGFL 598 Y C+LL DLIH EGAE +AEYG+DFYKGMP LTVN+FG+GKA+YVA+SPDA FL FL Sbjct: 541 GKYSCNLLFDLIHTEGAEAVAEYGSDFYKGMPVLTVNKFGKGKAWYVASSPDAEFLVDFL 600 Query: 599 SNLCAEKEIQPLVSAPEGIESVQRVKDGVSYLFLLNHKEGELSADIGSVQRTDLLTGKTF 658 +C E ++PL+ P G+E+ +RVKDG +YLF+LNH E++ ++ Q ++LT + Sbjct: 601 QTVCEEAGVEPLLDVPAGVETTERVKDGQTYLFVLNHNNDEVTIELHGSQYREVLTDEQV 660 Query: 659 SGTAVVPGRSVLILS 673 SG V+ + VLIL+ Sbjct: 661 SGNLVLKEKGVLILA 675 >gb|AAA22258.1| beta-D-galactosidase Length = 675 Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/675 (66%), Positives = 548/675 (81%) Query: 1 VINDKLPKIWYGGDYNPEQWDAPVWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDFS 60 +I+ KLPK++YGGDYNPEQWD ED RMFKLAGID+ATINVFSWALIQP E TY+F Sbjct: 1 MISSKLPKMFYGGDYNPEQWDHETHLEDLRMFKLAGIDIATINVFSWALIQPDEVTYNFE 60 Query: 61 GLDELMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSPV 120 GLD+L++ LY +G Y+CLATST AHPAWMA RYP+V RVD GRKRKFGGRHNS PNSP Sbjct: 61 GLDQLINSLYESGVYICLATSTAAHPAWMAKRYPDVLRVDADGRKRKFGGRHNSCPNSPT 120 Query: 121 YRKFAAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALNK 180 YRK++ K+A KLAERYKDHP ++ WHISNEYGG Y + E AFRV+LK RY +LD LNK Sbjct: 121 YRKYSEKIADKLAERYKDHPAVLVWHISNEYGGDCYCDNCEKAFRVYLKERYQTLDQLNK 180 Query: 181 AWNTRFWGHTFYDWEEIVVPSELSEEWNGNRTNFQGISLDYRRFMSHSLLECYKLEYDAI 240 AWNT FWGHTFYDW+EIV+PS LSE W N + FQGISLDY RF S S+L+CY+LEYDAI Sbjct: 181 AWNTNFWGHTFYDWDEIVLPSNLSEHWGNNNSTFQGISLDYSRFNSDSMLDCYRLEYDAI 240 Query: 241 KEHSTNVPVTTNLMGFYPELDYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRGLKNG 300 K+H + VTTNLMGF+ +LDYF+WAK+MD+VSWD+YP L TPVS TAM HDLMRGLK+G Sbjct: 241 KKHIPDSVVTTNLMGFFKQLDYFKWAKYMDIVSWDSYPGLATPVSFTAMAHDLMRGLKDG 300 Query: 301 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEKYHGA 360 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQ+VA GADT++FFQLRRS+GACEKYHGA Sbjct: 301 QPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQSVAHGADTIMFFQLRRSVGACEKYHGA 360 Query: 361 VIEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSGPSVA 420 VIEHVGHE+TRVFRE A+LG+EL LLGD+ LDA A++ I++DW+N WA++ SSGP+VA Sbjct: 361 VIEHVGHENTRVFREVAKLGKELQLLGDKTLDAAVEAKVAIVFDWDNWWAIEKSSGPTVA 420 Query: 421 LDYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFVKAGG 480 L+YV+++HKYY A +++NI+ D++ V+ D+S+Y IV+APVLYM+KPGFA K+E FV+AGG Sbjct: 421 LNYVDQIHKYYAAFFRRNIQVDIVSVDTDISKYDIVLAPVLYMVKPGFAAKLEKFVEAGG 480 Query: 481 TFVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGALNRT 540 TF+TT+FSGIVNE+D+VT GGYPGELRK+LGIW EEIDALLP N IVM + +G L Sbjct: 481 TFLTTFFSGIVNESDIVTTGGYPGELRKLLGIWVEEIDALLPEQRNRIVMKEAYGDLQGD 540 Query: 541 YPCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQGFLSN 600 Y C +LCDL+H+EGAE++AEYG DFYKG+P +T N FG+G+A+YVA+ P+ FL G L Sbjct: 541 YGCGMLCDLLHSEGAEIIAEYGDDFYKGIPVVTRNTFGQGEAWYVASDPEDRFLDGLLGQ 600 Query: 601 LCAEKEIQPLVSAPEGIESVQRVKDGVSYLFLLNHKEGELSADIGSVQRTDLLTGKTFSG 660 L A K I L+ PEG+E R K+G YLF++NH S D+G+ + DLLT +T SG Sbjct: 601 LAAAKNIASLLDTPEGVEVTARSKNGQQYLFVMNHNATTQSYDLGNAEAHDLLTDQTLSG 660 Query: 661 TAVVPGRSVLILSDK 675 + GR V +L K Sbjct: 661 MIEIEGRGVQLLEMK 675 >ref|NP_228122.1| beta-D-galactosidase [Thermotoga maritima] pir||E72391 beta-D-galactosidase - Thermotoga maritima (strain MSB8) gb|AAD35398.1| beta-D-galactosidase [Thermotoga maritima] Length = 672 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/676 (47%), Positives = 434/676 (64%), Gaps = 11/676 (1%) Query: 1 VINDKLPKIWYGGDYNPEQWDAPVWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDFS 60 ++N KLP IWYGGDY PEQWD + D RMFK AGI+V TI VFSW+LIQP E+TYDFS Sbjct: 1 MVNPKLPVIWYGGDYYPEQWDEETFERDIRMFKEAGINVVTIGVFSWSLIQPDENTYDFS 60 Query: 61 GLDELMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSPV 120 +++MDRLY G YVCLAT T A P WM +YPE+ DV G KR+ GGR N PNS Sbjct: 61 FFEKVMDRLYKEGIYVCLATPTSAPPHWMTQKYPEILFTDVNGVKREKGGRQNFCPNSEK 120 Query: 121 YRKFAAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALNK 180 YR FA +A KLAE +KDHP LV WH++NEY Y Y + F+ WLK +YG+LD LN+ Sbjct: 121 YRYFARNIAEKLAEHFKDHPALVLWHVNNEYLNYCYCDICRGKFQNWLKEKYGTLDELNR 180 Query: 181 AWNTRFWGHTFYDWEEIVVPSELSE-EWNGNR--TNFQGISLDYRRFMSHSLLECYKLEY 237 WNTRFW TF WEEI VP+ S W +R + + LDYRRFM+ S+LEC+ EY Sbjct: 181 RWNTRFWSQTFTAWEEIPVPTTRSVLVWRKDRYQSVLPELYLDYRRFMTQSMLECFLEEY 240 Query: 238 DAIKEHSTNVPVTTNLM-GFYPELDYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRG 296 AIK+H+ ++PVTTNL+ + E +YFEWAKHMDV +WDNYP S ++ H L+R Sbjct: 241 RAIKKHTPDIPVTTNLIAATFKEWNYFEWAKHMDVAAWDNYPGYKEDFSVISLRHSLIRC 300 Query: 297 LKNGQPFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEK 356 LK G+PF+LMEQ+PSQ W+ YN KRPG MRLWSY A+A GA+T++FFQLR+S G EK Sbjct: 301 LKEGKPFVLMEQSPSQACWRWYNPQKRPGEMRLWSYHALAHGAETLMFFQLRQSKGGVEK 360 Query: 357 YHGAVIEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSG 416 +HGAVI HV +TRVF+E +G E+ L D +LDAR +Q +++DWE+ WA++ + Sbjct: 361 FHGAVITHVDSPNTRVFQEVKRVGEEIKSLSD-ILDARVVSQTALLFDWESWWAMEDTLT 419 Query: 417 PSVALDYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFV 476 PSV Y+NEV KY+ AL + + D++G +++ RY++++APVLYM+ A+K++ +V Sbjct: 420 PSVDFRYLNEVQKYFKALVKTGLGVDVVGKDQNFERYRVLVAPVLYMVGKELAQKLKDYV 479 Query: 477 KAGGTFVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGA 536 GG + T SGIV+E+D V +GGYPG LR ++G + EEIDAL P NEI+M Sbjct: 480 SNGGILILTTMSGIVDEDDQVVLGGYPGYLRDLMGGYVEEIDALPPEEKNEILM------ 533 Query: 537 LNRTYPCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQG 596 + Y C L+ D I AEVL +G D+Y PA+ N +G+G YYV +S + Sbjct: 534 FGKRYECSLVFDYIKTTTAEVLGRFGRDYYMNEPAVLRNNYGKGWVYYVGSSTSFDLVWD 593 Query: 597 FLSNLCAEKEIQPLVSAPEGIESVQRVKDGVSYLFLLNHKEGELSADIGSVQRTDLLTGK 656 + + E ++ ++ P+ +E ++++K + FL NH D+ DL+ G Sbjct: 594 LVKFMEREHNLRAEIAPPDDVEVIKKIKGEKIFYFLFNHSHELQIVDLPEGMFRDLIKGN 653 Query: 657 TFSGTAVVPGRSVLIL 672 + + VLIL Sbjct: 654 LYEKKVKLQPLDVLIL 669 >ref|NP_964713.1| beta-galactosidase [Lactobacillus johnsonii NCC 533] gb|AAS08679.1| beta-galactosidase [Lactobacillus johnsonii NCC 533] Length = 668 Score = 613 bits (1580), Expect = e-174, Method: Compositional matrix adjust. Identities = 301/634 (47%), Positives = 408/634 (64%), Gaps = 11/634 (1%) Query: 5 KLPKIWYGGDYNPEQWDAPVWAEDERMFKLAGIDVATINVFSWALIQPSEDTYDFSGLDE 64 +L + YGGDYNPEQW WA D ++FK A ++ ATINVFSWAL++ E YDFS LD+ Sbjct: 3 QLSRFLYGGDYNPEQWPEDTWANDIQVFKQAHLNSATINVFSWALLEQREGEYDFSKLDK 62 Query: 65 LMDRLYNNGTYVCLATSTGAHPAWMAHRYPEVTRVDVQGRKRKFGGRHNSNPNSPVYRKF 124 ++ L + + LAT+T A PAWM +YP+V RVD QGR+ FG RHN NS Y+ Sbjct: 63 IVKELSDANFDIVLATATAAMPAWMFKKYPDVARVDYQGRRHVFGQRHNFCSNSKNYQVL 122 Query: 125 AAKLAGKLAERYKDHPGLVAWHISNEYGGYDYSEQSEAAFRVWLKNRYGSLDALNKAWNT 184 A+KL K+ RY + + WH++NEYGG Y + + AFR WLK +Y +L+ LNKAWN Sbjct: 123 ASKLVKKIVSRYYKNSHIKVWHVNNEYGGNCYCDNCQNAFRDWLKYKYKNLETLNKAWNM 182 Query: 185 RFWGHTFYDWEEIVVPSELSEEW--NGNRTNFQGISLDYRRFMSHSLLECYKLEYDAIKE 242 WGH YDW+EIVVP+EL + W G T +SLDY RF S SLL+ +K+E IK+ Sbjct: 183 NVWGHRIYDWDEIVVPNELGDAWGAEGTETIVSALSLDYLRFQSESLLKLFKMEKAIIKK 242 Query: 243 HSTNVPVTTNLMGFYPEL-DYFEWAKHMDVVSWDNYPSLDTPVSHTAMTHDLMRGLKNGQ 301 + VTTN +L DY +WAK D++S+D+YPS + P +A +DLMR LK+ Q Sbjct: 243 YDPVALVTTNFHALPNKLLDYQKWAKEQDIISYDSYPSYNMPTYQSAFLYDLMRSLKH-Q 301 Query: 302 PFMLMEQTPSQQNWQPYNSLKRPGVMRLWSYQAVARGADTVLFFQLRRSIGACEKYHGAV 361 PFMLME TP+Q NWQPY+ LKRPG M QAVA GADTV FFQL+++IG EK+H AV Sbjct: 302 PFMLMESTPAQVNWQPYSPLKRPGQMAATELQAVAHGADTVQFFQLKQAIGGSEKFHSAV 361 Query: 362 IEHVGHEHTRVFRECAELGRELGLLGDQLLDARSAAQIGIIYDWENRWALDLSSGPSVAL 421 I H TRVF+E ELG +L G +L +++ A++GI++DW N W+ + G + L Sbjct: 362 ISHSQRTDTRVFKEVTELGEKLEKTGSTILGSKTKAKVGIVFDWNNFWSYEYIDGITQDL 421 Query: 422 DYVNEVHKYYDALYQQNIEADMIGVEEDLSRYKIVIAPVLYMIKPGFAEKVEAFVKAGGT 481 DYV + YY Y++NI D+I V++D S+Y +V+APVLYMIK G AEK++ +VK GG Sbjct: 422 DYVESILDYYKQFYKRNIPTDIISVDDDFSQYDLVVAPVLYMIKSGLAEKIDQYVKKGGN 481 Query: 482 FVTTYFSGIVNENDLVTVGGYPGELRKVLGIWAEEIDALLPGMSNEIVMSKEWGALNRTY 541 FV +Y SGIVNEND V +GGYPG L+ VLGIW EE DA++PG + + + Y Sbjct: 482 FVASYLSGIVNENDSVYLGGYPGPLKDVLGIWVEESDAVIPGQKITVSLD------SNNY 535 Query: 542 PCDLLCDLIHAEGAEVLAEYGADFYKGMPALTVNRFGEGKAYYVATSPDAAFLQGFLSNL 601 +L+CDL+H EGA L Y ++FYK PA++ N++G+G ++Y+ T D A L +L Sbjct: 536 QANLICDLLHLEGAHALGNYNSEFYKETPAVSENQWGKGTSWYIGTQLDEAGLSKIFDHL 595 Query: 602 CAEKEIQPLVSAPEGIESVQRV-KDGVSYLFLLN 634 + I+ L+ +E +RV K G F+LN Sbjct: 596 ISIVNIKSLIETKTDLEITKRVTKSGKELYFVLN 629 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.319 0.136 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,125,210,982 Number of extensions: 49859994 Number of successful extensions: 116207 Number of sequences better than 1.0e-05: 76 Number of HSP's gapped: 115864 Number of HSP's successfully gapped: 77 Length of query: 676 Length of database: 757,237,578 Length adjustment: 132 Effective length of query: 544 Effective length of database: 398,844,510 Effective search space: 216971413440 Effective search space used: 216971413440 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)