BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0038.0004.p (424 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_979022.1| oxalate:formate antiporter, putative [Bacillus ... 427 e-118 ref|NP_832444.1| Oxalate/formate antiporter [Bacillus cereus ATC... 426 e-118 ref|NP_845039.1| oxalate:formate antiporter, putative [Bacillus ... 425 e-117 ref|NP_978706.1| oxalate:formate antiporter, putative [Bacillus ... 414 e-114 ref|NP_832063.1| Oxalate/formate antiporter [Bacillus cereus ATC... 410 e-113 >ref|NP_979022.1| oxalate:formate antiporter, putative [Bacillus cereus ATCC 10987] gb|AAS41630.1| oxalate:formate antiporter, putative [Bacillus cereus ATCC 10987] Length = 402 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 218/402 (54%), Positives = 263/402 (65%), Gaps = 18/402 (4%) Query: 11 LIVLGTVIMQMGLGTIYTWSLFNAQLVSKFGWELXXXXXXXXXXXXXXXXXXXXXGKLQD 70 LIVLGT+I+Q+GLGTIYTWSLFN LVSKFGW L GKLQ Sbjct: 10 LIVLGTIIVQIGLGTIYTWSLFNQPLVSKFGWNLNAVAITFSITSFSLSFSTLFAGKLQQ 69 Query: 71 RLGLRRLTAAAGIMLGLGLIFSSQARSLPMLYLLAGVVVGYADGTAYITSLSNLIKWFPK 130 +LGLR+L A AGI+LGLGLI SSQ SLP+LYLLAGVVVGYADGTAYITSLSNLIKWFP Sbjct: 70 KLGLRKLIATAGIVLGLGLILSSQVSSLPLLYLLAGVVVGYADGTAYITSLSNLIKWFPN 129 Query: 131 NKGLISGVSVGAYGTGSLLFKYINGSLIDSAGVSNAFLYWGLMVMAMIVIGSMLVREXXX 190 KGLISG+SV AYG GSL+F+YINGSLIDS GVS AFLYWG++V+ +++IGS +RE Sbjct: 130 RKGLISGISVSAYGMGSLIFRYINGSLIDSLGVSQAFLYWGIIVLLLVLIGSFFLRE--- 186 Query: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXKDYTVKEMLRTKEAYLLFVVFFTACMSGLYLIG 250 DYT +EM+RTK+ YLLF + FT+CM GLYLI Sbjct: 187 ---------------AIVSNTVTETLHNDYTPREMMRTKQVYLLFFMLFTSCMGGLYLIS 231 Query: 251 VVKDIGVQLXXXXXXXXXXXXXXXXXXXTAGRLILGALSDRMSRLKXXXXXXXXXXXXXX 310 +VKDIGVQL T GR+ILG LSD++ R+K Sbjct: 232 MVKDIGVQLVGLSAATAANAVAMIAIFNTVGRIILGTLSDKIGRMKIVSATFIIIGLSVF 291 Query: 311 XXXYATLSYGLFFTCVAAIAFCFGGNITVFPAIVGDFFGLANHSKNYGIVYQGFGIGALS 370 + L+YG++F CVA++AFCFGGNIT+FPAIVGD+FGL NHS NYGIVYQGFG GAL+ Sbjct: 292 TLSFIPLNYGIYFACVASVAFCFGGNITIFPAIVGDYFGLKNHSTNYGIVYQGFGFGALA 351 Query: 371 GSFVAAFLGGFKPTFTVIGXXXXXXXXXXVSLKPPVQKQARE 412 GSF+ A GGF+PTF +IG + ++PP ++ +E Sbjct: 352 GSFIGALFGGFQPTFIIIGILSVISFVISILIRPPKAEKKKE 393 >ref|NP_832444.1| Oxalate/formate antiporter [Bacillus cereus ATCC 14579] gb|AAP09645.1| Oxalate/formate antiporter [Bacillus cereus ATCC 14579] Length = 402 Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust. Identities = 220/409 (53%), Positives = 266/409 (65%), Gaps = 19/409 (4%) Query: 11 LIVLGTVIMQMGLGTIYTWSLFNAQLVSKFGWELXXXXXXXXXXXXXXXXXXXXXGKLQD 70 LIVLGT+I+Q+GLGTIYTWSLFN LVSKFGW L KLQ Sbjct: 10 LIVLGTIIVQIGLGTIYTWSLFNQPLVSKFGWNLNAVAITFSITSFSLSFSTLFAAKLQK 69 Query: 71 RLGLRRLTAAAGIMLGLGLIFSSQARSLPMLYLLAGVVVGYADGTAYITSLSNLIKWFPK 130 +LGLR+L A AGI+LGLGLI SSQ SLP+LYLLAGVVVGYADGTAYITSLSNLIKWFP Sbjct: 70 KLGLRKLIATAGIVLGLGLILSSQVSSLPLLYLLAGVVVGYADGTAYITSLSNLIKWFPN 129 Query: 131 NKGLISGVSVGAYGTGSLLFKYINGSLIDSAGVSNAFLYWGLMVMAMIVIGSMLVREXXX 190 KGLISG+SV AYG GSL+F+YING+LID+ GVS AFLYWG++V+ +++IGS +RE Sbjct: 130 RKGLISGISVSAYGMGSLIFRYINGNLIDNLGVSQAFLYWGIIVLLLVLIGSFFLRE--- 186 Query: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXKDYTVKEMLRTKEAYLLFVVFFTACMSGLYLIG 250 DYT +EM+RTK+ YLLF + FT+CM GLYLI Sbjct: 187 ---------------AIVSNAVTETLHNDYTPREMMRTKQVYLLFFMLFTSCMGGLYLIS 231 Query: 251 VVKDIGVQLXXXXXXXXXXXXXXXXXXXTAGRLILGALSDRMSRLKXXXXXXXXXXXXXX 310 +VKDIGVQL T GR+ILG LSD++ R+K Sbjct: 232 MVKDIGVQLVGLSAATAANAVAMIAIFNTVGRIILGTLSDKIGRMKIVSATFIIIGLSVF 291 Query: 311 XXXYATLSYGLFFTCVAAIAFCFGGNITVFPAIVGDFFGLANHSKNYGIVYQGFGIGALS 370 + L+YG++F CVA++AFCFGGNIT+FPAIVGDFFGL NHS NYGIVYQGFG GAL+ Sbjct: 292 TLSFIPLNYGIYFACVASVAFCFGGNITIFPAIVGDFFGLKNHSTNYGIVYQGFGFGALA 351 Query: 371 GSFVAAFLGGFKPTFTVIGXXXXXXXXXXVSLKPP-VQKQAREKGISLK 418 GSF+ A LGGF+PTF +IG + ++PP V+K+ K + K Sbjct: 352 GSFIGAILGGFQPTFIIIGVLSVISFIISILIRPPNVEKKKELKHLHRK 400 >ref|NP_845039.1| oxalate:formate antiporter, putative [Bacillus anthracis str. Ames] gb|AAP26525.1| oxalate:formate antiporter, putative [Bacillus anthracis str. Ames] Length = 402 Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust. Identities = 217/402 (53%), Positives = 262/402 (65%), Gaps = 18/402 (4%) Query: 11 LIVLGTVIMQMGLGTIYTWSLFNAQLVSKFGWELXXXXXXXXXXXXXXXXXXXXXGKLQD 70 LIVLGT+I+Q+GLGTIYTWSLFN LVSKFGW L GKLQ Sbjct: 10 LIVLGTIIVQIGLGTIYTWSLFNQPLVSKFGWNLNSVAITFSITSFSLSFSTLFAGKLQQ 69 Query: 71 RLGLRRLTAAAGIMLGLGLIFSSQARSLPMLYLLAGVVVGYADGTAYITSLSNLIKWFPK 130 +LGLR+L A AGI+LGLGLI SSQ SLP+LYLLAGVVVGYADGTAYITSLSNLIKWFP Sbjct: 70 KLGLRKLIATAGIVLGLGLILSSQVSSLPLLYLLAGVVVGYADGTAYITSLSNLIKWFPN 129 Query: 131 NKGLISGVSVGAYGTGSLLFKYINGSLIDSAGVSNAFLYWGLMVMAMIVIGSMLVREXXX 190 KGLISG+SV AYG GSL+F+YING+LID+ GVS AFLYWG++V+ +++IGS +RE Sbjct: 130 RKGLISGISVSAYGMGSLIFRYINGNLIDNLGVSQAFLYWGIIVLLLVLIGSFFLRE--- 186 Query: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXKDYTVKEMLRTKEAYLLFVVFFTACMSGLYLIG 250 DYT +EM+ TK+ YLLF + FT+CM GLYLIG Sbjct: 187 ---------------AIVSNAVTETLHNDYTPREMMGTKQVYLLFFMLFTSCMGGLYLIG 231 Query: 251 VVKDIGVQLXXXXXXXXXXXXXXXXXXXTAGRLILGALSDRMSRLKXXXXXXXXXXXXXX 310 +VKDIGVQL T GR++LG LSD++ R+K Sbjct: 232 MVKDIGVQLVGLSTATAANAVAMIAIFNTVGRIVLGTLSDKIGRMKIVSATFIIIGLSVF 291 Query: 311 XXXYATLSYGLFFTCVAAIAFCFGGNITVFPAIVGDFFGLANHSKNYGIVYQGFGIGALS 370 + L+YG++F CVA+ AFCFGGNIT+FPAIVGDFFGL NHS NYGIVYQGFG GAL+ Sbjct: 292 TLSFIPLNYGIYFACVASFAFCFGGNITIFPAIVGDFFGLKNHSTNYGIVYQGFGFGALA 351 Query: 371 GSFVAAFLGGFKPTFTVIGXXXXXXXXXXVSLKPPVQKQARE 412 GSF+ A LGGF+PTF +IG + ++PP ++ E Sbjct: 352 GSFIGAILGGFQPTFIIIGVLSVISFIISILIRPPNAEKKNE 393 >ref|NP_978706.1| oxalate:formate antiporter, putative [Bacillus cereus ATCC 10987] gb|AAS41314.1| oxalate:formate antiporter, putative [Bacillus cereus ATCC 10987] Length = 400 Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust. Identities = 222/404 (54%), Positives = 267/404 (66%), Gaps = 18/404 (4%) Query: 10 WLIVLGTVIMQMGLGTIYTWSLFNAQLVSKFGWELXXXXXXXXXXXXXXXXXXXXXGKLQ 69 WL+VLGTVI+QMGLGTIYTWSLFN LVSK+GW L KLQ Sbjct: 9 WLVVLGTVIVQMGLGTIYTWSLFNQPLVSKYGWSLNAVAITFSITSLSLAFSTLFASKLQ 68 Query: 70 DRLGLRRLTAAAGIMLGLGLIFSSQARSLPMLYLLAGVVVGYADGTAYITSLSNLIKWFP 129 ++ GLR+L AG+ LGLGL+ SSQA SL +LY+LAGVVVGYADGTAYITSLSNLIKWFP Sbjct: 69 EKWGLRKLIMIAGLALGLGLVLSSQASSLILLYVLAGVVVGYADGTAYITSLSNLIKWFP 128 Query: 130 KNKGLISGVSVGAYGTGSLLFKYINGSLIDSAGVSNAFLYWGLMVMAMIVIGSMLVREXX 189 + KGLISG+SV AYGTGSL+FKYIN LIDS GVS AF+YWGL+V AMIV+G+ L+ + Sbjct: 129 ERKGLISGISVAAYGTGSLIFKYINAKLIDSVGVSQAFIYWGLIVTAMIVLGACLIHQ-- 186 Query: 190 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKDYTVKEMLRTKEAYLLFVVFFTACMSGLYLI 249 +YT+KEML TK+ YLLF++ FT+CMSGLYLI Sbjct: 187 ----------------AADQGAVQETNTHEYTMKEMLGTKQVYLLFIMLFTSCMSGLYLI 230 Query: 250 GVVKDIGVQLXXXXXXXXXXXXXXXXXXXTAGRLILGALSDRMSRLKXXXXXXXXXXXXX 309 G+VKDIGVQL T GR+ILG LSD++ RLK Sbjct: 231 GMVKDIGVQLVGLSAATAANAVAMVAIFNTLGRIILGPLSDKIGRLKIVTGTFVVMASSV 290 Query: 310 XXXXYATLSYGLFFTCVAAIAFCFGGNITVFPAIVGDFFGLANHSKNYGIVYQGFGIGAL 369 + L+YG++F CVA++AFCFGGNIT+FPAIVGDFFG+ NHSKNYGIVYQGFG GAL Sbjct: 291 LVLSFVDLNYGIYFVCVASVAFCFGGNITIFPAIVGDFFGMKNHSKNYGIVYQGFGFGAL 350 Query: 370 SGSFVAAFLGGFKPTFTVIGXXXXXXXXXXVSLKPPVQKQAREK 413 +GSF+ A LGGFKPTF VIG + ++ P QK+ +E+ Sbjct: 351 AGSFIGALLGGFKPTFMVIGVLCVVSFIIAILIQAPKQKKEQEE 394 >ref|NP_832063.1| Oxalate/formate antiporter [Bacillus cereus ATCC 14579] gb|AAP09264.1| Oxalate/formate antiporter [Bacillus cereus ATCC 14579] Length = 400 Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust. Identities = 220/404 (54%), Positives = 266/404 (65%), Gaps = 18/404 (4%) Query: 10 WLIVLGTVIMQMGLGTIYTWSLFNAQLVSKFGWELXXXXXXXXXXXXXXXXXXXXXGKLQ 69 W +VLGTVI+QMGLGTIYTWSLFN LVSK+GW L KLQ Sbjct: 9 WFVVLGTVIVQMGLGTIYTWSLFNQPLVSKYGWSLNAVAITFSITSLSLAFSTLFASKLQ 68 Query: 70 DRLGLRRLTAAAGIMLGLGLIFSSQARSLPMLYLLAGVVVGYADGTAYITSLSNLIKWFP 129 ++ GLR+L AG+ LGLGLI SSQA SL +LY+LAGVVVGYADGTAYITSLSNLIKWFP Sbjct: 69 EKWGLRKLIMIAGLALGLGLILSSQASSLILLYVLAGVVVGYADGTAYITSLSNLIKWFP 128 Query: 130 KNKGLISGVSVGAYGTGSLLFKYINGSLIDSAGVSNAFLYWGLMVMAMIVIGSMLVREXX 189 + KGLI+G+SV AYG+GSL+FKY+N LI+S GVS AF+YWGL+V AMIVIG+ L+ + Sbjct: 129 ERKGLIAGISVSAYGSGSLIFKYVNAQLIESVGVSQAFIYWGLIVTAMIVIGACLIHQ-- 186 Query: 190 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKDYTVKEMLRTKEAYLLFVVFFTACMSGLYLI 249 K+YT KEML TK+ YLLF++ FT+CMSGLYLI Sbjct: 187 ----------------AADQGAVHETKTKEYTTKEMLGTKQVYLLFIMLFTSCMSGLYLI 230 Query: 250 GVVKDIGVQLXXXXXXXXXXXXXXXXXXXTAGRLILGALSDRMSRLKXXXXXXXXXXXXX 309 G+VKDIGVQL T GR+ILG LSD++ RLK Sbjct: 231 GMVKDIGVQLVGLSAATAANAVAMVAIFNTLGRIILGPLSDKIGRLKIVTGTFVVMASSV 290 Query: 310 XXXXYATLSYGLFFTCVAAIAFCFGGNITVFPAIVGDFFGLANHSKNYGIVYQGFGIGAL 369 + L+YG++F CVA++AFCFGGNIT+FPAIVGDFFG+ NHSKNYGIVYQGFG GAL Sbjct: 291 LVLSFVDLNYGIYFVCVASVAFCFGGNITIFPAIVGDFFGMKNHSKNYGIVYQGFGFGAL 350 Query: 370 SGSFVAAFLGGFKPTFTVIGXXXXXXXXXXVSLKPPVQKQAREK 413 +GSF+ A LGGFKPTF VIG + ++ P QK+ +E+ Sbjct: 351 AGSFIGALLGGFKPTFMVIGVLCVVSFIIAILIQAPKQKKEQEE 394 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.326 0.142 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 452,603,230 Number of extensions: 15793160 Number of successful extensions: 63192 Number of sequences better than 1.0e-05: 147 Number of HSP's gapped: 63159 Number of HSP's successfully gapped: 178 Length of query: 424 Length of database: 757,237,578 Length adjustment: 128 Effective length of query: 296 Effective length of database: 409,704,906 Effective search space: 121272652176 Effective search space used: 121272652176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 127 (53.5 bits)