BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0005.p (463 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_387931.1| UDP-N-acetylglucosamine pyrophosphorylase [Baci... 562 e-159 sp|P14192|GCAD_BACSU UDP-N-acetylglucosamine pyrophosphorylase (... 558 e-157 ref|NP_829951.1| Glucosamine-1-phosphate acetyltransferase [Baci... 551 e-155 ref|NP_976375.1| UDP-N-acetylglucosamine pyrophosphorylase [Baci... 550 e-155 ref|NP_653997.1| NTP_transferase, Nucleotidyl transferase [Bacil... 548 e-155 >ref|NP_387931.1| UDP-N-acetylglucosamine pyrophosphorylase [Bacillus subtilis] pir||S66080 UDP-N-acetylglucosamine pyrophosphorylase gcaD - Bacillus subtilis dbj|BAA05285.1| temperature sensitive cell division [Bacillus subtilis] emb|CAB11826.1| UDP-N-acetylglucosamine pyrophosphorylase [Bacillus subtilis subsp. subtilis str. 168] Length = 456 Score = 562 bits (1448), Expect = e-159, Method: Compositional matrix adjust. Identities = 275/445 (61%), Positives = 333/445 (74%) Query: 1 MAVVLAAGQGKRMKSKLYKVLHPVCGKPMVGHVLDTVKATGCQRTVVVVGHGAEKVKAYV 60 AVVLAAGQG RMKSKLYKVLHPVCGKPMV HV+D + V +VGHGAE+VK + Sbjct: 5 FAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDEALKLSLSKLVTIVGHGAEEVKKQL 64 Query: 61 GQDAEYVLQETQLGTGHAVKQAKDLLGGEAGTTIVICGDTPLVTAETLEGLMALHEGQSA 120 G +EY LQ QLGT HAVKQA+ L E G TIVICGDTPL+TAET+E ++ H + A Sbjct: 65 GDKSEYALQAKQLGTAHAVKQAQPFLADEKGVTIVICGDTPLLTAETMEQMLKEHTQREA 124 Query: 121 AATVLTAVMDQPAGYGRIIRGEDGGVQKIVEQKDCTPEEAAVNEINTGTYCFDNAKLFAA 180 AT+LTAV + P GYGRIIR E+G VQKIVE KD + EE V EINTGTYCFDN LF A Sbjct: 125 KATILTAVAEDPTGYGRIIRSENGAVQKIVEHKDASEEERLVTEINTGTYCFDNEALFRA 184 Query: 181 LDKVTNSNNQQEYYLTDVIGILRAQGDIVLGYQAHDAAESIGVNDRLALSEAESLMRQRI 240 +D+V+N N Q EYYL DVI IL+ +G+ V YQ + E++GVNDR+ALS+AE M++RI Sbjct: 185 IDQVSNDNAQGEYYLPDVIEILKNEGETVAAYQTGNFQETLGVNDRVALSQAEQFMKERI 244 Query: 241 NRQHMLNGVTIIDPASTYIAADVVIGADTTLYPGTVLKGKTVIGEDCIIGPSSEIENCVI 300 N++HM NGVT+IDP +TYI+ D VIG+DT +YPGTV+KG+ IGED IIGP +EI N I Sbjct: 245 NKRHMQNGVTLIDPMNTYISPDAVIGSDTVIYPGTVIKGEVQIGEDTIIGPHTEIMNSAI 304 Query: 301 MNGAEVKHSVLNQAQVGARTSVGPFAYLRPGAVLGEEVKIGDFVEIKNASIGDGSKVSHL 360 + +K SV+N ++VG ++GPFA++RP +V+G EVKIG+FVEIK GD SK SHL Sbjct: 305 GSRTVIKQSVVNHSKVGNDVNIGPFAHIRPDSVIGNEVKIGNFVEIKKTQFGDRSKASHL 364 Query: 361 SYVGDATVGKNVNVGCGAITVNYDGYNKSRTEIGDDAFIGSNVNLVAPVTVGKGAFVVAG 420 SYVGDA VG +VN+GCG+ITVNYDG NK T+I D AFIG N NLVAPVTVG+GA+V AG Sbjct: 365 SYVGDAEVGTDVNLGCGSITVNYDGKNKYLTKIEDGAFIGCNSNLVAPVTVGEGAYVAAG 424 Query: 421 STITRSVSENDLAIARVRQENKPGY 445 ST+T V LAIAR RQ NK Y Sbjct: 425 STVTEDVPGKALAIARARQVNKDDY 449 >sp|P14192|GCAD_BACSU UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase) (TMS protein) emb|CAA34522.1| unnamed protein product [Bacillus subtilis] Length = 456 Score = 558 bits (1437), Expect = e-157, Method: Compositional matrix adjust. Identities = 273/445 (61%), Positives = 332/445 (74%) Query: 1 MAVVLAAGQGKRMKSKLYKVLHPVCGKPMVGHVLDTVKATGCQRTVVVVGHGAEKVKAYV 60 AVVLAAGQG RMKSKLYKVLHPVCGKPMV HV+D + V +VGHGAE+VK + Sbjct: 5 FAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDEALKLSLSKLVTIVGHGAEEVKKQL 64 Query: 61 GQDAEYVLQETQLGTGHAVKQAKDLLGGEAGTTIVICGDTPLVTAETLEGLMALHEGQSA 120 G +EY +Q QLGT HAVKQA+ L E G TIVICGDTPL+TAET+E ++ H + A Sbjct: 65 GDKSEYRVQAKQLGTAHAVKQAQPFLADEKGVTIVICGDTPLLTAETMEQMLKEHTQREA 124 Query: 121 AATVLTAVMDQPAGYGRIIRGEDGGVQKIVEQKDCTPEEAAVNEINTGTYCFDNAKLFAA 180 T+LTAV + P GYGRIIR E+G VQKIVE KD + EE V EINTGTYCFDN LF A Sbjct: 125 KRTILTAVAEDPTGYGRIIRSENGAVQKIVEHKDASEEERLVTEINTGTYCFDNEALFRA 184 Query: 181 LDKVTNSNNQQEYYLTDVIGILRAQGDIVLGYQAHDAAESIGVNDRLALSEAESLMRQRI 240 +D+V+N N Q EYYL DVI IL+ +G+ V YQ + E++GVNDR+ALS+AE M++RI Sbjct: 185 IDQVSNDNAQGEYYLPDVIEILKNEGETVAAYQTGNFQETLGVNDRVALSQAEQFMKERI 244 Query: 241 NRQHMLNGVTIIDPASTYIAADVVIGADTTLYPGTVLKGKTVIGEDCIIGPSSEIENCVI 300 N++HM NGVT+IDP +TYI+ D VIG+DT +YPGTV+KG+ IGED IIGP +EI N I Sbjct: 245 NKRHMQNGVTLIDPMNTYISPDAVIGSDTVIYPGTVIKGEVQIGEDTIIGPHTEIMNSAI 304 Query: 301 MNGAEVKHSVLNQAQVGARTSVGPFAYLRPGAVLGEEVKIGDFVEIKNASIGDGSKVSHL 360 + +K SV+N ++VG ++GPFA++RP +V+G EVKIG+FVEIK GD SK SHL Sbjct: 305 GSRTVIKQSVVNHSKVGNDVNIGPFAHIRPDSVIGNEVKIGNFVEIKKTQFGDRSKASHL 364 Query: 361 SYVGDATVGKNVNVGCGAITVNYDGYNKSRTEIGDDAFIGSNVNLVAPVTVGKGAFVVAG 420 SYVGDA VG +VN+GCG+ITVNYDG NK T+I D AFIG N NLVAPVTVG+GA+V AG Sbjct: 365 SYVGDAEVGTDVNLGCGSITVNYDGKNKYLTKIEDGAFIGCNSNLVAPVTVGEGAYVAAG 424 Query: 421 STITRSVSENDLAIARVRQENKPGY 445 ST+T V LAIAR RQ NK Y Sbjct: 425 STVTEDVPGKALAIARARQVNKDDY 449 >ref|NP_829951.1| Glucosamine-1-phosphate acetyltransferase [Bacillus cereus ATCC 14579] gb|AAP07152.1| Glucosamine-1-phosphate acetyltransferase [Bacillus cereus ATCC 14579] Length = 459 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 265/445 (59%), Positives = 338/445 (75%) Query: 1 MAVVLAAGQGKRMKSKLYKVLHPVCGKPMVGHVLDTVKATGCQRTVVVVGHGAEKVKAYV 60 AV+LAAG+G RMKSKLYKVLHPVCGKPMV HV+D V G Q+ V VVGHGAE V+ + Sbjct: 5 FAVILAAGKGTRMKSKLYKVLHPVCGKPMVQHVVDQVSQLGLQKLVTVVGHGAEMVQEQL 64 Query: 61 GQDAEYVLQETQLGTGHAVKQAKDLLGGEAGTTIVICGDTPLVTAETLEGLMALHEGQSA 120 G +E+ LQ QLGT HAV QA +L E GTT+VICGDTPL+TAET+E L+ H+ A Sbjct: 65 GNVSEFALQAEQLGTAHAVDQAASVLANEEGTTLVICGDTPLITAETMEALLQQHKEAGA 124 Query: 121 AATVLTAVMDQPAGYGRIIRGEDGGVQKIVEQKDCTPEEAAVNEINTGTYCFDNAKLFAA 180 ATVLTA +++PAGYGRI+R E+G V+KIVE KD +E A+ EINTGTYCFDN LFA+ Sbjct: 125 MATVLTAYIEEPAGYGRIVRNENGHVEKIVEHKDANEKELAIKEINTGTYCFDNKALFAS 184 Query: 181 LDKVTNSNNQQEYYLTDVIGILRAQGDIVLGYQAHDAAESIGVNDRLALSEAESLMRQRI 240 L KV+N N Q EYYL DVI IL+ +G IV YQ E++GVNDR+ALS+AE +M+ RI Sbjct: 185 LSKVSNDNVQGEYYLPDVIEILKNEGHIVSAYQTEQFDETLGVNDRVALSQAEIIMKNRI 244 Query: 241 NRQHMLNGVTIIDPASTYIAADVVIGADTTLYPGTVLKGKTVIGEDCIIGPSSEIENCVI 300 NR++M+NGVTIIDP++TYI+AD VIG+DT L+PGT+++G TVIG DC IGP + I + I Sbjct: 245 NRKNMVNGVTIIDPSNTYISADAVIGSDTVLHPGTIIEGNTVIGSDCEIGPHTVIRDSEI 304 Query: 301 MNGAEVKHSVLNQAQVGARTSVGPFAYLRPGAVLGEEVKIGDFVEIKNASIGDGSKVSHL 360 + ++ S ++ +++G SVGPFA++RP +V+G+EV++G+FVEIK G+ SK SHL Sbjct: 305 GDRTTIRQSTVHDSKLGTEVSVGPFAHIRPDSVIGDEVRVGNFVEIKKTVFGNRSKASHL 364 Query: 361 SYVGDATVGKNVNVGCGAITVNYDGYNKSRTEIGDDAFIGSNVNLVAPVTVGKGAFVVAG 420 SY+GDA VG++VN+GCG+ITVNYDG NK +T IG+ FIG N NLVAPVTV GA+V AG Sbjct: 365 SYIGDAQVGEDVNLGCGSITVNYDGKNKFKTVIGNGVFIGCNSNLVAPVTVEDGAYVAAG 424 Query: 421 STITRSVSENDLAIARVRQENKPGY 445 STIT +V L++AR RQ NK Y Sbjct: 425 STITENVPSKALSVARARQVNKEDY 449 >ref|NP_976375.1| UDP-N-acetylglucosamine pyrophosphorylase [Bacillus cereus ATCC 10987] gb|AAS38983.1| UDP-N-acetylglucosamine pyrophosphorylase [Bacillus cereus ATCC 10987] Length = 459 Score = 550 bits (1416), Expect = e-155, Method: Compositional matrix adjust. Identities = 264/445 (59%), Positives = 338/445 (75%) Query: 1 MAVVLAAGQGKRMKSKLYKVLHPVCGKPMVGHVLDTVKATGCQRTVVVVGHGAEKVKAYV 60 AV+LAAG+G RMKSKLYKVLHPVCGKPMV HV+D V G Q+ V VVGHGAE V+ + Sbjct: 5 FAVILAAGKGTRMKSKLYKVLHPVCGKPMVQHVVDQVSQLGLQKLVTVVGHGAEMVQEQL 64 Query: 61 GQDAEYVLQETQLGTGHAVKQAKDLLGGEAGTTIVICGDTPLVTAETLEGLMALHEGQSA 120 G +E+ LQ QLGT HAV QA +L E GTT+VICGDTPL+TAET+E L+ H+ A Sbjct: 65 GNVSEFALQAEQLGTAHAVDQAASVLANEEGTTLVICGDTPLITAETMEALLQQHKEAGA 124 Query: 121 AATVLTAVMDQPAGYGRIIRGEDGGVQKIVEQKDCTPEEAAVNEINTGTYCFDNAKLFAA 180 ATVLTA +++PAGYGRI+R E+G V+KIVE KD +E A+ EINTGTYCFDN LFA+ Sbjct: 125 MATVLTAYIEEPAGYGRIVRNENGHVEKIVEHKDANEKELAIKEINTGTYCFDNKALFAS 184 Query: 181 LDKVTNSNNQQEYYLTDVIGILRAQGDIVLGYQAHDAAESIGVNDRLALSEAESLMRQRI 240 L KV+N N Q EYYL DVI IL+ +G IV YQ E++GVNDR+ALS+AE +M+ RI Sbjct: 185 LSKVSNDNVQGEYYLPDVIEILKNEGHIVSAYQTEHFDETLGVNDRVALSQAEIIMKNRI 244 Query: 241 NRQHMLNGVTIIDPASTYIAADVVIGADTTLYPGTVLKGKTVIGEDCIIGPSSEIENCVI 300 NR++M+NGVTIIDP++TYI+AD +IG+DT L+PGT+++G TVIG DC IGP + I + I Sbjct: 245 NRKNMVNGVTIIDPSNTYISADAIIGSDTVLHPGTIIEGNTVIGSDCEIGPHTVIRDSEI 304 Query: 301 MNGAEVKHSVLNQAQVGARTSVGPFAYLRPGAVLGEEVKIGDFVEIKNASIGDGSKVSHL 360 + ++ S ++ +++G SVGPFA++RP +V+G+EV++G+FVEIK G+ SK SHL Sbjct: 305 GDRTTIRQSTVHDSKLGTEVSVGPFAHIRPDSVIGDEVRVGNFVEIKKTVFGNRSKASHL 364 Query: 361 SYVGDATVGKNVNVGCGAITVNYDGYNKSRTEIGDDAFIGSNVNLVAPVTVGKGAFVVAG 420 SY+GDA VG++VN+GCG+ITVNYDG NK +T IG+ FIG N NLVAPVTV GA+V AG Sbjct: 365 SYIGDAQVGEDVNLGCGSITVNYDGKNKFKTVIGNGVFIGCNSNLVAPVTVEDGAYVAAG 424 Query: 421 STITRSVSENDLAIARVRQENKPGY 445 STIT +V L++AR RQ NK Y Sbjct: 425 STITENVPSKALSVARARQVNKEDY 449 >ref|NP_653997.1| NTP_transferase, Nucleotidyl transferase [Bacillus anthracis A2012] ref|NP_842617.1| UDP-N-acetylglucosamine pyrophosphorylase [Bacillus anthracis str. Ames] gb|AAP24103.1| UDP-N-acetylglucosamine pyrophosphorylase [Bacillus anthracis str. Ames] Length = 459 Score = 548 bits (1412), Expect = e-155, Method: Compositional matrix adjust. Identities = 264/445 (59%), Positives = 338/445 (75%) Query: 1 MAVVLAAGQGKRMKSKLYKVLHPVCGKPMVGHVLDTVKATGCQRTVVVVGHGAEKVKAYV 60 AV+LAAG+G RMKSKLYKVLHPVCGKPMV HV+D V G Q+ V VVGHGAE V+ + Sbjct: 5 FAVILAAGKGTRMKSKLYKVLHPVCGKPMVQHVVDQVSQLGLQKLVTVVGHGAEMVQEQL 64 Query: 61 GQDAEYVLQETQLGTGHAVKQAKDLLGGEAGTTIVICGDTPLVTAETLEGLMALHEGQSA 120 G +E+ LQ QLGT HAV QA +L E GTT+VICGDTPL+TAET+E L+ H+ A Sbjct: 65 GNVSEFALQAEQLGTAHAVDQAAGVLANEEGTTLVICGDTPLITAETMEALLQQHKEAGA 124 Query: 121 AATVLTAVMDQPAGYGRIIRGEDGGVQKIVEQKDCTPEEAAVNEINTGTYCFDNAKLFAA 180 ATVLTA +++PAGYGRI+R E+G V+KIVE KD +E A+ EINTGTYCFDN LFA+ Sbjct: 125 MATVLTAYIEEPAGYGRIVRNENGHVEKIVEHKDANEKELAIKEINTGTYCFDNKALFAS 184 Query: 181 LDKVTNSNNQQEYYLTDVIGILRAQGDIVLGYQAHDAAESIGVNDRLALSEAESLMRQRI 240 L KV+N N Q EYYL DVI IL+ +G IV YQ E++GVNDR+ALS+AE +M+ RI Sbjct: 185 LSKVSNDNVQGEYYLPDVIEILKNEGHIVSAYQTEHFDETLGVNDRVALSQAEIIMKNRI 244 Query: 241 NRQHMLNGVTIIDPASTYIAADVVIGADTTLYPGTVLKGKTVIGEDCIIGPSSEIENCVI 300 NR++M+NGVTIIDP++TYI+AD +IG+DT L+PGT+++G TVIG DC IGP + I + I Sbjct: 245 NRKNMVNGVTIIDPSNTYISADAIIGSDTVLHPGTIIEGNTVIGSDCEIGPHTVIRDSEI 304 Query: 301 MNGAEVKHSVLNQAQVGARTSVGPFAYLRPGAVLGEEVKIGDFVEIKNASIGDGSKVSHL 360 + ++ S ++ +++G SVGPFA++RP +V+G+EV++G+FVEIK G+ SK SHL Sbjct: 305 GDRTTIRQSTVHDSKLGTEVSVGPFAHIRPDSVIGDEVRVGNFVEIKKTVFGNRSKASHL 364 Query: 361 SYVGDATVGKNVNVGCGAITVNYDGYNKSRTEIGDDAFIGSNVNLVAPVTVGKGAFVVAG 420 SY+GDA VG++VN+GCG+ITVNYDG NK +T IG+ FIG N NLVAPVTV GA+V AG Sbjct: 365 SYIGDAQVGEDVNLGCGSITVNYDGKNKFKTVIGNGVFIGCNSNLVAPVTVEDGAYVAAG 424 Query: 421 STITRSVSENDLAIARVRQENKPGY 445 STIT +V L++AR RQ NK Y Sbjct: 425 STITENVPSKALSVARARQVNKEDY 449 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.315 0.133 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 645,180,295 Number of extensions: 27259512 Number of successful extensions: 68038 Number of sequences better than 1.0e-05: 981 Number of HSP's gapped: 66206 Number of HSP's successfully gapped: 997 Length of query: 463 Length of database: 757,237,578 Length adjustment: 129 Effective length of query: 334 Effective length of database: 406,989,807 Effective search space: 135934595538 Effective search space used: 135934595538 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 128 (53.9 bits)