BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0004.0009.p (835 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_240944.1| stage II sporulation protein E [Bacillus halodu... 635 e-180 ref|NP_387945.1| serine phosphatase [Bacillus subtilis] >gi|5860... 615 e-174 ref|NP_829964.1| Stage II sporulation protein E [Bacillus cereus... 586 e-165 ref|NP_690995.1| stage II sporulation protein E [Oceanobacillus ... 585 e-165 ref|NP_842630.1| stage II sporulation protein E [Bacillus anthra... 584 e-165 >ref|NP_240944.1| stage II sporulation protein E [Bacillus halodurans] pir||F83659 stage II sporulation protein E spoIIE [imported] - Bacillus halodurans (strain C-125) dbj|BAB03797.1| stage II sporulation protein E [Bacillus halodurans] Length = 830 Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust. Identities = 327/776 (42%), Positives = 510/776 (65%), Gaps = 8/776 (1%) Query: 61 RAMILDELSPFAAAYFAVIVFMRRDSILPVAAAIILGSL--FTPFPGAVMVAAELIIFFL 118 RA+IL+EL+PF + A + +++D ++ A A+ G++ F G V+VA ++ F L Sbjct: 57 RAVILEELTPFVVPFLAAVYLLKKDKLMLAAIAMFAGAVTSFHQEVGFVIVA--MVAFLL 114 Query: 119 IYKGLESFQKVELSYAPLMVFVSSFM--VGLFKIVMGPSITWYSLMMITLDALLGFVLTL 176 K E F P V ++S + +GL ++ G +I+ Y++MM ++ L F+LTL Sbjct: 115 FQKVTERFTDQRKKIVPYSVLIASVVSRLGLVYLIEG-AISNYAVMMAIVEGGLSFILTL 173 Query: 177 VFLQALPVFTYKQKSRALRNDEVLCLIILLASVMTGLVGWSVNGLSLEHILSRFXXXXXX 236 +FLQ++P+ T K+ + LRN+E++CL+ILLASVMTG VGW GL++EH+ +R+ Sbjct: 174 IFLQSVPLLTAKRIQQPLRNEEIVCLVILLASVMTGTVGWFFYGLTVEHMFARYLVLIFA 233 Query: 237 XXXXXXXXXXXXXXXXXXXSLADIGAIYQMSLLAFSGMLAGMMQSGRKGAVSIGMLLGST 296 SLA + ++YQMSLLAFSG+L G+++ G+K VS+G+L+G+ Sbjct: 234 FVGGAAIGSTVGVVTGLILSLASVASLYQMSLLAFSGLLGGLLKEGKKVGVSLGLLVGTM 293 Query: 297 ILSVYFLGPGDVMASTWETCAAVVLFLLTPKGMISAIAKYVPGTPDHSRSQHEYARRVRD 356 ++ +Y G ++ + ET A+ +FL+TPKG I AIA+Y+PGT ++S+ Q +Y R++RD Sbjct: 294 LIGLYGEGGTNIQLTMMETAVAIAIFLITPKGWIHAIARYIPGTTEYSKEQQQYLRKIRD 353 Query: 357 ITADRVTQFSQVFRQLSSSFGQIPRAGEAGKSDREMEDFMNTVTEGACSGCIRRTHCWDA 416 ITA RV QFS +F+ LS+SF P + +++E + ++ VTE C C ++ CW Sbjct: 354 ITAGRVEQFSNLFQTLSTSFST-PTSAATEDAEKEWDYVLSNVTEKTCQACFKKEKCWVR 412 Query: 417 KFYQTYRYMTDMMTTVEECPNITAAQLPPEWSRICGKTGEVLEVMKGQYELYQHDMRWKR 476 F TY M +M E+ + +L EW + C K +V++ ++ ++ + + + Sbjct: 413 NFNTTYDAMQRLMIETEKNGEVIDKRLLVEWKQHCIKPDKVMQAIQQEHTQHLAHQKLRH 472 Query: 477 QIYDSRQFVAEQLSGVSQVMEDLANEIKREGQAMYRQESQIREALEKLGLSIHSIEILSL 536 Q+ +SR+ VA+QL GVS+VM D A EI++E Q + +E QI EAL +GL I ++I L Sbjct: 473 QVMESRKLVADQLLGVSRVMGDFAKEIQKERQEHHLEEEQILEALRSVGLEIGHVDIFQL 532 Query: 537 DPGRVEIEVVHAYTRGFDECRKMIAPLLSDILEENIAVVNETAVHPREGLSMVTFGSAKA 596 + G +EI++ A G + K+IAP+LSD+L E I V +E + G V+FGSAK Sbjct: 533 EKGNMEIDMSIADDSGHGQAEKIIAPMLSDMLGETIIVKHEERHYYPNGYQHVSFGSAKQ 592 Query: 597 YEVNTGVAGAAKGGDMLSGDSFSTVELGNGTFAVSISDGMGNGERARMESSAALGMLEKL 656 + V TGVA AKGG +SGDS+ST+ELG+G +A++ISDGMGNGERA +ES+ L +L+K+ Sbjct: 593 FVVETGVAHVAKGGGWISGDSYSTIELGSGKYAIAISDGMGNGERAHLESNDTLQLLQKI 652 Query: 657 LQSGMDEKLAVKSVNSILLLRSPDEFYATVDMALIDQYSAQTTFMKIASAPSFIRRGSEV 716 LQSG++E +A+KS+NS+L LR+ DE ++T+D+A+ID + A F+KI S PSFI+RG++V Sbjct: 653 LQSGIEETVAIKSINSVLSLRTTDEVFSTLDLAMIDLHDATAKFLKIGSIPSFIKRGNKV 712 Query: 717 IPVTASNLPIGIIKEIEVDLVSMQLRPGDILIMMTDGIYDAPGYAVNKEIWMKRLIQELE 776 I + A NLP+GII+E +VD+VS QL+ GD+LIMM+DGI +AP + N+E+W+KRL+ E+E Sbjct: 713 IKMEAGNLPMGIIQEFDVDVVSEQLKAGDLLIMMSDGILEAPRHVENREMWIKRLVSEME 772 Query: 777 GDDPQELADNLLEKVIRYQGNEIHDDMTIVVSRLDHFHPEWSSLHLPGIGRMERPR 832 DDPQELAD LLE+V+R + +I DDMTI+V+++ P+W+++ + R+ R + Sbjct: 773 TDDPQELADLLLERVLRTEKGQIDDDMTIIVAKVKRNMPKWAAIPMHKPKRILRKK 828 >ref|NP_387945.1| serine phosphatase [Bacillus subtilis] sp|P37475|SP2E_BACSU Stage II sporulation protein E pir||S66094 stage II sporulation protein SpoIIE - Bacillus subtilis dbj|BAA05299.1| stage II sporulation [Bacillus subtilis] gb|AAB58073.1| SpoIIE [Bacillus subtilis] emb|CAB11840.1| serine phosphatase [Bacillus subtilis subsp. subtilis str. 168] prf||2209421A spollE gene Length = 827 Score = 615 bits (1587), Expect = e-174, Method: Compositional matrix adjust. Identities = 328/767 (42%), Positives = 495/767 (64%), Gaps = 4/767 (0%) Query: 61 RAMILDELSPFAAAYFAVIVFMRRDSILPVAAAIILGSLFTPFPGAVMVAAELIIFFLIY 120 RA IL E+ PFA +F ++ +RRD A++ G+L ++++ A L+ FF+ Sbjct: 55 RAFILSEVLPFALPFFGAMLLIRRDKAFYAVLAVLAGALTISPKHSLLILAALLAFFVFS 114 Query: 121 KGLESFQKVELSYAPLMVFVS-SFMVGLFKIVMGPSITWYSLMMITLDALLGFVLTLVFL 179 K + P++VF S + F T Y +M ++A L F+LTL+FL Sbjct: 115 KVAAFITDDRVKALPIVVFFSMAAARAGFVYAQNGVFTTYDYVMAIVEAGLSFILTLIFL 174 Query: 180 QALPVFTYKQKSRALRNDEVLCLIILLASVMTGLVGWSVNGLSLEHILSRFXXXXXXXXX 239 Q+LP+FT K+ ++L+ +E++C +IL+ASV+TGL G S G+ EHIL+R+ Sbjct: 175 QSLPIFTVKKVKQSLKIEEIICFMILIASVLTGLAGLSYQGMQAEHILARYVVLSFSFIG 234 Query: 240 XXXXXXXXXXXXXXXXSLADIGAIYQMSLLAFSGMLAGMMQSGRKGAVSIGMLLGSTILS 299 LA+IG +YQMSLLAFSG+L G+++ G+K +IG+++GS ++S Sbjct: 235 GASIGCTVGVVTGLILGLANIGNLYQMSLLAFSGLLGGLLKEGKKAGAAIGLIVGSLLIS 294 Query: 300 VYFLGPGDVMASTWETCAAVVLFLLTPKGMISAIAKYVPGTPDHSRSQHEYARRVRDITA 359 +Y G +M + +E+ AV LFLLTP+ + +A+Y+PGT +H + Q +YAR++RD+TA Sbjct: 295 LYGEGSAGLMTTLYESLIAVCLFLLTPQSITRKVARYIPGTVEHLQEQQQYARKIRDVTA 354 Query: 360 DRVTQFSQVFRQLSSSFGQIPRAGEAGKSDREMEDFMNTVTEGACSGCIRRTHCWDAKFY 419 +V QFS VF LS SF +A + D E++ F++ +TE +C C ++ CW F Sbjct: 355 QKVDQFSNVFHALSESFATFYQASDEQTDDSEVDLFLSKITEHSCQTCYKKNRCWVQNFD 414 Query: 420 QTYRYMTDMMTTVEECPNITAAQLPPEWSRICGKTGEVLEVMKGQYELYQHDMRWKRQIY 479 +TY M +M EE + +L E+ + C K+ +V E+++ + + + K+++ Sbjct: 415 KTYDLMKQVMLETEEKEYASNRRLKKEFQQYCSKSKQVEELIEDELAHHHAHLTLKKKVQ 474 Query: 480 DSRQFVAEQLSGVSQVMEDLANEIKREGQAMYRQESQIREALEKLGLSIHSIEILSLDPG 539 DSR+ VAEQL GVS+VM D + EIKRE + + QE QI EAL+ G+ I +EI SL+ G Sbjct: 475 DSRRLVAEQLLGVSEVMADFSREIKREREQHFLQEEQIIEALQHFGIEIQHVEIYSLEQG 534 Query: 540 RVEIEVVHAYTRGFDECRKMIAPLLSDILEENIAVVNET-AVHPREGLSMVTFGSAKAYE 598 ++IE+ ++ G E K+IAP+LSDILEE I V E + HP G S V FGS K+Y Sbjct: 535 NIDIEMTIPFS-GHGESEKIIAPMLSDILEEQILVKAEQHSPHPN-GYSHVAFGSTKSYR 592 Query: 599 VNTGVAGAAKGGDMLSGDSFSTVELGNGTFAVSISDGMGNGERARMESSAALGMLEKLLQ 658 V+TG A AAKGG ++SGDS+S +ELG +A +ISDGMGNG RA ES+ + +LEK+L+ Sbjct: 593 VSTGAAHAAKGGGLVSGDSYSMMELGARKYAAAISDGMGNGARAHFESNETIKLLEKILE 652 Query: 659 SGMDEKLAVKSVNSILLLRSPDEFYATVDMALIDQYSAQTTFMKIASAPSFIRRGSEVIP 718 SG+DEK+A+K++NSIL LR+ DE Y+T+D+++ID A F+K+ S PSFI+RG +V+ Sbjct: 653 SGIDEKIAIKTINSILSLRTTDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMK 712 Query: 719 VTASNLPIGIIKEIEVDLVSMQLRPGDILIMMTDGIYDAPGYAVNKEIWMKRLIQELEGD 778 V ASNLPIGII E +V++VS QL+ GD+LIMM+DGI++ P + N ++WMKR ++ L+ + Sbjct: 713 VQASNLPIGIINEFDVEVVSEQLKAGDLLIMMSDGIFEGPKHVENHDLWMKRKMKGLKTN 772 Query: 779 DPQELADNLLEKVIRYQGNEIHDDMTIVVSRLDHFHPEWSSLHLPGI 825 DPQE+AD L+E+VIR + +I DDMT+VV R+DH P+W+S+ +P I Sbjct: 773 DPQEIADLLMEEVIRTRSGQIEDDMTVVVVRIDHNTPKWASIPVPAI 819 >ref|NP_829964.1| Stage II sporulation protein E [Bacillus cereus ATCC 14579] gb|AAP07165.1| Stage II sporulation protein E [Bacillus cereus ATCC 14579] Length = 815 Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust. Identities = 303/768 (39%), Positives = 491/768 (63%), Gaps = 4/768 (0%) Query: 61 RAMILDELSPFAAAYFAVIVFMRRDSILPVAAAIILGSLFTPFPGAVMVAAELIIFFLIY 120 RA IL + PFA +FA + M+RD + A++ G+L A + FF+ Sbjct: 46 RAYILTNILPFALPFFAAVYVMKRDKMPLAFLALMGGALSVSIDNLFFTFASIFTFFIYN 105 Query: 121 KGLESFQKVELSYAPLMVFVSSFMVGLFKIVMGP-SITWYSLMMITLDALLGFVLTLVFL 179 F + + P VF+S+ L + ++T Y L++ T++A L FVLT++FL Sbjct: 106 IFFSRFTRKTVGLVPFQVFISALTAHLVVVYFAQQTVTMYDLLVSTIEAGLSFVLTMIFL 165 Query: 180 QALPVFTYKQ-KSRALRNDEVLCLIILLASVMTGLVGWSVNGLSLEHILSRFXXXXXXXX 238 Q++P+ ++ K +AL +E++CLIILLASV+TG W V S++HI +R+ Sbjct: 166 QSVPLLVERKGKQQALETEEIVCLIILLASVLTGTTDWFVYDASIQHIFTRYLVLVFAFI 225 Query: 239 XXXXXXXXXXXXXXXXXSLADIGAIYQMSLLAFSGMLAGMMQSGRKGAVSIGMLLGSTIL 298 SLA++ ++ Q+SLLAFSG+L G+++ G++ VS+G+L+G++++ Sbjct: 226 AGAATGSTVGVVTGLILSLANVSSLSQLSLLAFSGLLGGLLKEGKRLGVSLGLLIGTSLI 285 Query: 299 SVYFLGPGDVMASTWETCAAVVLFLLTPKGMISAIAKYVPGTPDHSRSQHEYARRVRDIT 358 ++Y +++ + E+ A+V+FLLTPK ++ IAK++PGT +HS+ Q +Y RR+RD+T Sbjct: 286 TLYVDKQTNIVTTLIESGVAIVIFLLTPKLVLDRIAKFMPGTQEHSQDQQQYLRRMRDVT 345 Query: 359 ADRVTQFSQVFRQLSSSFGQIPRAGEAGKSDREMEDFMNTVTEGACSGCIRRTHCWDAKF 418 A+++ QF+ VF LS+SF E K + E + F++T+T C C ++ CW F Sbjct: 346 ANKINQFANVFAALSNSFSVYGYVEEEDK-ETEADLFLSTITAKTCQTCFKKDQCWVVNF 404 Query: 419 YQTYRYMTDMMTTVEECPNITAAQLPPEWSRICGKTGEVLEVMKGQYELYQHDMRWKRQI 478 +TY YM +M EE +L EW + C + +V +++ G+ + + + ++Q+ Sbjct: 405 DKTYDYMKQIMNETEEGTLQHNRKLVREWDKHCVRGKKVTDLVAGELDHFYEGQKLRKQM 464 Query: 479 YDSRQFVAEQLSGVSQVMEDLANEIKREGQAMYRQESQIREALEKLGLSIHSIEILSLDP 538 ++R+ VAEQL GVS+VMED A EI+RE + QE QI +A G+ + ++I LD Sbjct: 465 KENRRIVAEQLLGVSKVMEDFAKEIQRERENHQVQEEQIMQAFRDFGVEVEHVDIYCLDR 524 Query: 539 GRVEIE-VVHAYTRGFDECRKMIAPLLSDILEENIAVVNETAVHPREGLSMVTFGSAKAY 597 G ++IE ++ + EC K++AP+LSDIL+ENI V +E G S+++FGSAK Y Sbjct: 525 GSIDIEMLIPVASNEHGECEKLVAPMLSDILKENIVVKHEEKSSYPNGHSLISFGSAKTY 584 Query: 598 EVNTGVAGAAKGGDMLSGDSFSTVELGNGTFAVSISDGMGNGERARMESSAALGMLEKLL 657 ++TG+A AAKGG +SGDS++ ++L G +A++ISDGMGNG+RA MES + +L+K+L Sbjct: 585 SLDTGLATAAKGGGFVSGDSYAMMDLSVGKYALAISDGMGNGQRAHMESKETVKLLQKIL 644 Query: 658 QSGMDEKLAVKSVNSILLLRSPDEFYATVDMALIDQYSAQTTFMKIASAPSFIRRGSEVI 717 QSG+DE++A+KS+NSIL LR+ +E + T+D+A++D A F+KI S PSF++R + ++ Sbjct: 645 QSGIDEEIAIKSINSILSLRTTEEMFTTLDLAMVDLRDASARFLKIGSTPSFVKRANNIL 704 Query: 718 PVTASNLPIGIIKEIEVDLVSMQLRPGDILIMMTDGIYDAPGYAVNKEIWMKRLIQELEG 777 + ASNLP+GII+++EVD+V QL+ GDILIMM+DGI++ + N E+WMKR I+EL+ Sbjct: 705 KIEASNLPMGIIEDVEVDVVGEQLKTGDILIMMSDGIFEGAQHVENHELWMKRKIKELQT 764 Query: 778 DDPQELADNLLEKVIRYQGNEIHDDMTIVVSRLDHFHPEWSSLHLPGI 825 +DPQE+AD ++E+VIR I+DDMTIVV+++ P+W+++ + G+ Sbjct: 765 EDPQEIADIIMEEVIRSCDGYINDDMTIVVAKVKKNMPKWATIPIVGM 812 >ref|NP_690995.1| stage II sporulation protein E [Oceanobacillus iheyensis HTE831] dbj|BAC12030.1| stage II sporulation protein E [Oceanobacillus iheyensis HTE831] Length = 818 Score = 585 bits (1509), Expect = e-165, Method: Compositional matrix adjust. Identities = 321/767 (41%), Positives = 492/767 (64%), Gaps = 15/767 (1%) Query: 61 RAMILDELSPFAAAYFAVIVFMRRDSILPVAAAIILGSLFTPFPGAVMVAAELIIFFLIY 120 RA+IL +SPFA A+ A I + RD L A+ LG+L F A+ + ++F LI Sbjct: 52 RAVILSAVSPFAVAFIATIWLVHRDKSLKSMIAVFLGALSYQFEHAMFIGLAFLVFILIG 111 Query: 121 KGLESFQKVELSYAPLMVFVSSFMVGLFKIVMGPSITWYSLMMITLDALLGFVLTLVFLQ 180 +S + +L P++VF+S+ + +F + ++T Y ++ ++ +LG VL ++F+Q Sbjct: 112 SLTKSMKNQQL-VLPIVVFLSTILSRIFFYSLSDTVTSYEWALLAVEGVLGAVLVIIFMQ 170 Query: 181 ALPVFTYKQKSRALRNDEVLCLIILLASVMTGLVGWSVNGLSLEHILSRFXXXXXXXXXX 240 ++P+ K+ AL+N+E++CLIIL+ASV+TG +GW + G S+E I SR+ Sbjct: 171 SIPLLAPKRYKPALKNEEIVCLIILIASVLTGFIGWQIYGASVEQIFSRYFVLIFSFIGG 230 Query: 241 XXXXXXXXXXXXXXXSLADIGAIYQMSLLAFSGMLAGMMQSGRKGAVSIGMLLGSTILSV 300 SLA++ +YQMSLLAFSG+L G+++ G+K +IG+L+G+ ++ + Sbjct: 231 AAIGSTVGVVAGLILSLANVANLYQMSLLAFSGLLGGLLKEGKKPGTAIGLLVGTCLIGI 290 Query: 301 YFLGPGDVMA---STWETCAAVVLFLLTPKGMISAIAKYVPGTPDHSRSQHEYARRVRDI 357 Y G+ +A S E+ A+ LFLLTP + IA+Y+PGT ++ Q +Y ++VR++ Sbjct: 291 Y----GNSVALVPSLMESSVAIALFLLTPASWFNHIARYIPGTEAYTNEQEQYLQKVRNV 346 Query: 358 TADRVTQFSQVFRQLSSSFGQI-PRAG-EAGKSDREMEDFMNTVTEGACSGCIRRTHCWD 415 TA RV QFS VFR LS SF P E ++ R+ + F++ VTE C GC + CW Sbjct: 347 TAKRVEQFSDVFRALSKSFSVTDPTVNDEQQEARRDTDYFLSQVTEKTCQGCFMKDRCWQ 406 Query: 416 AKFYQTYRYMTDMMTTVE--ECPNITAAQLPPEWSRICGKTGEVLEVMKGQYELYQHDMR 473 +F QTY M +M V + PN ++ ++ C K+ +V++ MK + Y+ + + Sbjct: 407 KEFDQTYSLMEEMKEDVTSGKDPN---RKVMRKFENHCVKSRKVVDAMKEEMSFYEANRK 463 Query: 474 WKRQIYDSRQFVAEQLSGVSQVMEDLANEIKREGQAMYRQESQIREALEKLGLSIHSIEI 533 ++Q+ +S++ VA+QL GVS VMED A EI +E Q QE+Q+ AL+ +G+ + ++I Sbjct: 464 LRQQVTESKRLVADQLQGVSDVMEDFAKEIVKERQHHELQEAQVVAALKHIGIELTRLDI 523 Query: 534 LSLDPGRVEIEVVHAYTRGFDECRKMIAPLLSDILEENIAVVNETAVHPREGLSMVTFGS 593 L+ G V+IE+ ++ E K+IAP+LSDIL E I V E G S TFGS Sbjct: 524 YQLEKGNVDIELTASFGEYRGEGEKLIAPILSDILHEIIVVKQEDISPFPHGYSHFTFGS 583 Query: 594 AKAYEVNTGVAGAAKGGDMLSGDSFSTVELGNGTFAVSISDGMGNGERARMESSAALGML 653 AK + + TG A AAKGG ++SGDSF+T+ELG G FA++ISDGMGNG+RAR ES L +L Sbjct: 584 AKEFAIETGAANAAKGGGLVSGDSFTTIELGAGKFAMAISDGMGNGKRAREESMETLRLL 643 Query: 654 EKLLQSGMDEKLAVKSVNSILLLRSPDEFYATVDMALIDQYSAQTTFMKIASAPSFIRRG 713 +++LQSG+ EK+A+KS+NSIL LR+ +E +AT+D+++ID + A F+KI S PSFIRRG Sbjct: 644 QQILQSGIKEKVAIKSINSILSLRTTEEMFATLDLSVIDLHDAHAQFVKIGSTPSFIRRG 703 Query: 714 SEVIPVTASNLPIGIIKEIEVDLVSMQLRPGDILIMMTDGIYDAPGYAVNKEIWMKRLIQ 773 + +I + ASNLPIGIIKE +V++V QL P D+LIMM+DGI+D P + N ++W+KR I+ Sbjct: 704 ANMIKIEASNLPIGIIKEFDVEIVKEQLLPDDLLIMMSDGIFDGPQHVENIDLWLKRKIK 763 Query: 774 ELEGDDPQELADNLLEKVIRYQGNEIHDDMTIVVSRLDHFHPEWSSL 820 E++ DPQE+AD LLE+VIR + EI DDMT++V+++ P+W+S+ Sbjct: 764 EMDTADPQEIADLLLEEVIRTRSGEIIDDMTVLVAKVKKNTPQWTSI 810 >ref|NP_842630.1| stage II sporulation protein E [Bacillus anthracis str. Ames] gb|AAP24116.1| stage II sporulation protein E [Bacillus anthracis str. Ames] Length = 792 Score = 584 bits (1505), Expect = e-165, Method: Compositional matrix adjust. Identities = 303/768 (39%), Positives = 490/768 (63%), Gaps = 4/768 (0%) Query: 61 RAMILDELSPFAAAYFAVIVFMRRDSILPVAAAIILGSLFTPFPGAVMVAAELIIFFLIY 120 RA IL + PFA +FA + M+RD + A++ G+L A + FF+ Sbjct: 23 RAYILTNILPFALPFFAAVYVMKRDKMPLAFLALMGGALSVSIDNLFFTFASIFTFFIYN 82 Query: 121 KGLESFQKVELSYAPLMVFVSSFMVGLFKIVMGP-SITWYSLMMITLDALLGFVLTLVFL 179 F + + P VF+S+ L + ++T Y L++ T++A L FVLT++FL Sbjct: 83 IFFSRFTRKTVGLVPFQVFISALTAHLVVVYFAQQTVTMYDLLVSTIEAGLSFVLTMIFL 142 Query: 180 QALPVFTYKQ-KSRALRNDEVLCLIILLASVMTGLVGWSVNGLSLEHILSRFXXXXXXXX 238 Q++P+ ++ K +AL +E++CLIILLASV+TG W V S++HI +R+ Sbjct: 143 QSVPLLVERKGKQQALETEEIVCLIILLASVLTGTTDWFVYDASIQHIFTRYLVLVFAFI 202 Query: 239 XXXXXXXXXXXXXXXXXSLADIGAIYQMSLLAFSGMLAGMMQSGRKGAVSIGMLLGSTIL 298 SLA++ ++ Q+SLLAFSG+L G+++ G++ VS+G+L+G++++ Sbjct: 203 AGAATGSTVGVVTGLILSLANVSSLSQLSLLAFSGLLGGLLKEGKRIGVSLGLLIGTSLI 262 Query: 299 SVYFLGPGDVMASTWETCAAVVLFLLTPKGMISAIAKYVPGTPDHSRSQHEYARRVRDIT 358 ++Y +++ + E+ A+ FLLTPK ++ IAK++PGT +HS+ Q +Y RR+RD+T Sbjct: 263 TLYVDKQTNIVTTLIESGVAIAFFLLTPKLVMDRIAKFMPGTQEHSQDQQQYLRRMRDVT 322 Query: 359 ADRVTQFSQVFRQLSSSFGQIPRAGEAGKSDREMEDFMNTVTEGACSGCIRRTHCWDAKF 418 A+++ QF+ VF LS+SF E K + E + F++T+T C C ++ CW F Sbjct: 323 ANKINQFANVFAALSNSFSVYGYVEEEDK-ETEADLFLSTITAKTCQTCFKKDQCWVVNF 381 Query: 419 YQTYRYMTDMMTTVEECPNITAAQLPPEWSRICGKTGEVLEVMKGQYELYQHDMRWKRQI 478 +TY YM +M+ EE +L EW + C + +V +++ G+ + + + ++Q+ Sbjct: 382 DKTYDYMKQIMSETEEGTLQHNRKLVREWDKHCVRGKKVTDLVAGELDHFYEGQKLRKQM 441 Query: 479 YDSRQFVAEQLSGVSQVMEDLANEIKREGQAMYRQESQIREALEKLGLSIHSIEILSLDP 538 ++R+ VAEQL GVS+VMED A EI+RE + QE QI +A G+ I ++I LD Sbjct: 442 KENRRIVAEQLLGVSKVMEDFAKEIQRERENHQVQEEQILQAFRDFGVEIEHVDIYCLDR 501 Query: 539 GRVEIE-VVHAYTRGFDECRKMIAPLLSDILEENIAVVNETAVHPREGLSMVTFGSAKAY 597 G ++IE ++ + EC K++AP+LSDIL+ENI V +E G S+++FGSAK Y Sbjct: 502 GSIDIEMLIPVASNEHGECEKLVAPMLSDILKENIVVKHEEKSSYPNGHSLISFGSAKTY 561 Query: 598 EVNTGVAGAAKGGDMLSGDSFSTVELGNGTFAVSISDGMGNGERARMESSAALGMLEKLL 657 ++TG+A AAKGG +SGDS++ ++L G +A++ISDGMGNG+RA MES + +L+K+L Sbjct: 562 SLDTGLATAAKGGGFVSGDSYAMMDLSVGKYALAISDGMGNGQRAHMESKETVKLLQKIL 621 Query: 658 QSGMDEKLAVKSVNSILLLRSPDEFYATVDMALIDQYSAQTTFMKIASAPSFIRRGSEVI 717 QSG+DE++A+KS+NSIL LR+ +E + T+D+A++D A F+KI S PSF++R + ++ Sbjct: 622 QSGIDEEIAIKSINSILSLRTTEEMFTTLDLAMVDLRDASAKFLKIGSTPSFVKRANNIL 681 Query: 718 PVTASNLPIGIIKEIEVDLVSMQLRPGDILIMMTDGIYDAPGYAVNKEIWMKRLIQELEG 777 + ASNLP+GII+++EVD+V QL+ GDILIMM+DGI++ + N E+WMKR I+EL+ Sbjct: 682 KIEASNLPMGIIEDVEVDVVGEQLKTGDILIMMSDGIFEGAQHVENHELWMKRKIKELQT 741 Query: 778 DDPQELADNLLEKVIRYQGNEIHDDMTIVVSRLDHFHPEWSSLHLPGI 825 +DPQE+AD ++E+VIR I+DDMTIVV+++ P+W+++ + G+ Sbjct: 742 EDPQEIADIIMEEVIRSGDGYINDDMTIVVAKVKKNMPKWATIPIVGM 789 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.321 0.136 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 1,115,182,379 Number of extensions: 43862897 Number of successful extensions: 123971 Number of sequences better than 1.0e-05: 52 Number of HSP's gapped: 123974 Number of HSP's successfully gapped: 52 Length of query: 835 Length of database: 757,237,578 Length adjustment: 134 Effective length of query: 701 Effective length of database: 393,414,312 Effective search space: 275783432712 Effective search space used: 275783432712 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 130 (54.7 bits)