BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0005.p (166 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 2,715,099 sequences; 757,237,578 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_981557.1| bacterial transferase hexapeptide domain protei... 225 2e-58 ref|NP_847562.1| bacterial transferase hexapeptide domain protei... 225 3e-58 ref|NP_834825.1| CAPG protein [Bacillus cereus ATCC 14579] >gi|2... 224 7e-58 ref|NP_244453.1| acetyltransferase [Bacillus halodurans] >gi|254... 216 1e-55 ref|NP_391376.1| similar to O-acetyltransferase [Bacillus subtil... 214 7e-55 >ref|NP_981557.1| bacterial transferase hexapeptide domain protein [Bacillus cereus ATCC 10987] gb|AAS44165.1| bacterial transferase hexapeptide domain protein [Bacillus cereus ATCC 10987] Length = 168 Score = 225 bits (574), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 103/147 (70%), Positives = 125/147 (85%) Query: 1 VEGHNSLWYIYRTVSPWKGVRNFIFIQIARYCPILPVKNWIYRNVLGMKVGKHTAFGLMA 60 V G NSLW +Y+TVS WK ++NF+ IQIARY P L VKNW+YR L MKVGK T+F LM Sbjct: 9 VSGENSLWNVYKTVSFWKVMKNFMIIQIARYTPFLSVKNWLYRTFLRMKVGKKTSFALMV 68 Query: 61 MVDVFFPEKITVGENSVIGYNTTILAHEYLIKEYRLGEVIIGENVLIGANTTILPGVIIG 120 M D+ FPEKI VGENS+IGYNTT+LAHEYLI+EYRLGE++IG V+IGANTTILPGV IG Sbjct: 69 MPDIMFPEKIAVGENSIIGYNTTLLAHEYLIREYRLGEIVIGNEVMIGANTTILPGVKIG 128 Query: 121 DGAVIAAGSVVHKDVAAGSFVGGNPLR 147 DGA+++AG++VHKDV +G+FVGGNP+R Sbjct: 129 DGAIVSAGTLVHKDVPSGAFVGGNPMR 155 >ref|NP_847562.1| bacterial transferase hexapeptide domain protein [Bacillus anthracis str. Ames] gb|AAP29048.1| bacterial transferase hexapeptide domain protein [Bacillus anthracis str. Ames] Length = 170 Score = 225 bits (573), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 103/147 (70%), Positives = 126/147 (85%) Query: 1 VEGHNSLWYIYRTVSPWKGVRNFIFIQIARYCPILPVKNWIYRNVLGMKVGKHTAFGLMA 60 V G +SLW +Y+TVS WK ++NFI IQIARY P L VKNW+YR L MKVGK T+F LM Sbjct: 9 VSGESSLWNVYKTVSFWKVMKNFIIIQIARYTPFLSVKNWLYRTFLRMKVGKKTSFALMV 68 Query: 61 MVDVFFPEKITVGENSVIGYNTTILAHEYLIKEYRLGEVIIGENVLIGANTTILPGVIIG 120 M D+ FPEKITVG+NS+IGYNTT+LAHEYLI+EYRLGE++IG V+IGANTTILPGV IG Sbjct: 69 MPDIMFPEKITVGDNSIIGYNTTLLAHEYLIREYRLGEIVIGNEVMIGANTTILPGVRIG 128 Query: 121 DGAVIAAGSVVHKDVAAGSFVGGNPLR 147 DGA+++AG++VHKDV +G+FVGGNP+R Sbjct: 129 DGAIVSAGTLVHKDVPSGAFVGGNPMR 155 >ref|NP_834825.1| CAPG protein [Bacillus cereus ATCC 14579] gb|AAP12026.1| CAPG protein [Bacillus cereus ATCC 14579] Length = 170 Score = 224 bits (570), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 103/147 (70%), Positives = 124/147 (84%) Query: 1 VEGHNSLWYIYRTVSPWKGVRNFIFIQIARYCPILPVKNWIYRNVLGMKVGKHTAFGLMA 60 V G NSLW +Y+TVS WK ++NFI IQIARY P L VKNW+YR L MKVGK T+F LM Sbjct: 9 VSGENSLWNVYKTVSFWKVMKNFIIIQIARYTPCLSVKNWLYRTFLRMKVGKKTSFALMV 68 Query: 61 MVDVFFPEKITVGENSVIGYNTTILAHEYLIKEYRLGEVIIGENVLIGANTTILPGVIIG 120 M D+ FPEKITVGENS+IGYNTT+LAHEYLI+EYRLGE++IG V+IGAN TILPGV IG Sbjct: 69 MPDIMFPEKITVGENSIIGYNTTLLAHEYLIREYRLGEIVIGNEVMIGANVTILPGVKIG 128 Query: 121 DGAVIAAGSVVHKDVAAGSFVGGNPLR 147 DGA ++AG++VH+DV +G+FVGGNP+R Sbjct: 129 DGATVSAGTLVHRDVPSGAFVGGNPMR 155 >ref|NP_244453.1| acetyltransferase [Bacillus halodurans] pir||B84098 acetyltransferase BH3586 [imported] - Bacillus halodurans (strain C-125) dbj|BAB07305.1| acetyltransferase [Bacillus halodurans] Length = 166 Score = 216 bits (551), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 102/158 (64%), Positives = 130/158 (82%), Gaps = 1/158 (0%) Query: 1 VEGHNSLWYIYRTVSPWKGVRNFIFIQIARYCPILPVKNWIYRNVLGMKVGKHTAFGLMA 60 V+ NSLW IY+TV WK V+NF+ IQ+ARY P + VKNW+YR L M VG+ TAF LM Sbjct: 10 VKHANSLWQIYKTVPFWKVVKNFVVIQLARYTPFVSVKNWLYRTFLKMDVGEKTAFALMV 69 Query: 61 MVDVFFPEKITVGENSVIGYNTTILAHEYLIKEYRLGEVIIGENVLIGANTTILPGVIIG 120 M D+ FPE+I+VG NS+IGYNTTILAHEYLI+EYRLG+VIIG+ V++GANTTILPGV IG Sbjct: 70 MPDIMFPERISVGRNSIIGYNTTILAHEYLIEEYRLGDVIIGDEVMVGANTTILPGVTIG 129 Query: 121 DGAVIAAGSVVHKDVAAGSFVGGNPLRELRPSARNDRD 158 D A+IAAG+VVHK+V G+FVGGNP++ ++ + R+D+D Sbjct: 130 DRAIIAAGTVVHKNVPPGAFVGGNPMQVIKQN-RDDKD 166 >ref|NP_391376.1| similar to O-acetyltransferase [Bacillus subtilis] pir||H70044 O-acetyltransferase homolog yvoF - Bacillus subtilis gb|AAC67290.1| putative acetyltransferase [Bacillus subtilis] emb|CAB15501.1| yvoF [Bacillus subtilis subsp. subtilis str. 168] Length = 172 Score = 214 bits (544), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 100/147 (68%), Positives = 123/147 (83%) Query: 1 VEGHNSLWYIYRTVSPWKGVRNFIFIQIARYCPILPVKNWIYRNVLGMKVGKHTAFGLMA 60 V G NSLW++Y+TV K V+NFI IQIARY P + +KNW+YR L MKVGK T+F LM Sbjct: 9 VSGANSLWHVYQTVPFLKVVKNFIVIQIARYTPFIGMKNWLYRTFLRMKVGKQTSFALMV 68 Query: 61 MVDVFFPEKITVGENSVIGYNTTILAHEYLIKEYRLGEVIIGENVLIGANTTILPGVIIG 120 M D+ FPEKI+VG N++IGYNTTILAHEYLI EYR+G+V+IG+ V+IGANTTILPGV IG Sbjct: 69 MPDIMFPEKISVGTNTIIGYNTTILAHEYLIHEYRIGKVLIGDEVMIGANTTILPGVKIG 128 Query: 121 DGAVIAAGSVVHKDVAAGSFVGGNPLR 147 DGAV++AG++VHKDV G+FVGGNP+R Sbjct: 129 DGAVVSAGTLVHKDVPDGAFVGGNPMR 155 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Mar 24, 2004 1:53 AM Number of letters in database: 757,237,578 Number of sequences in database: 2,715,099 Lambda K H 0.322 0.141 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2715099 Number of Hits to DB: 270,915,472 Number of extensions: 11673684 Number of successful extensions: 39129 Number of sequences better than 1.0e-05: 406 Number of HSP's gapped: 38924 Number of HSP's successfully gapped: 406 Length of query: 166 Length of database: 757,237,578 Length adjustment: 116 Effective length of query: 50 Effective length of database: 442,286,094 Effective search space: 22114304700 Effective search space used: 22114304700 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 121 (51.2 bits)