BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0141.p (215 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sll1900 [R] COG0110 Acetyltransferase (isoleucine patch superfam... 256 1e-68 PM1197 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) 250 1e-66 mlr4814 [R] COG0110 Acetyltransferase (isoleucine patch superfam... 229 2e-60 SMc01797 [R] COG0110 Acetyltransferase (isoleucine patch superfa... 226 3e-59 CAC0777 [R] COG0110 Acetyltransferase (isoleucine patch superfam... 193 2e-49 >sll1900 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Length = 209 Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 120/208 (57%), Positives = 149/208 (71%), Gaps = 1/208 (0%) Query: 5 GPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFIGDQL 64 GPDP HP Q+ FIKNTV+ PNII GDY+YYDDP++S +FE V +H+ F+GD+L Sbjct: 3 GPDPQNKHPMAGFAQICFIKNTVSNPNIIIGDYTYYDDPEDSENFERNVLYHFPFVGDRL 62 Query: 65 IIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVIGNDV 124 IIGKFCA+AR +FIMNGANH M +TYPF I GW+ A E + P+KGDTVIGNDV Sbjct: 63 IIGKFCALARNVKFIMNGANHAMEGFSTYPFAIFANGWQTAELE-EEPPHKGDTVIGNDV 121 Query: 125 WIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALLLELK 184 WIG A IMPG+ +GDG+IIAA + VT V PY I GGNPAR +R+RF DE++ LL + Sbjct: 122 WIGYEAVIMPGIKVGDGAIIAAKAVVTNHVAPYTIVGGNPARPIRQRFKDEVVQALLTIA 181 Query: 185 WWDWSKEKITANLDVLCSNDLERIKGLA 212 WWDW EKIT NLD + D+E +K + Sbjct: 182 WWDWDIEKITRNLDKIAGADIEALKNCS 209 >PM1197 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Length = 207 Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 117/195 (60%), Positives = 143/195 (73%) Query: 6 PDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESRVTHHYEFIGDQLI 65 PD + + P + ++ F+KN V PNII GD++YYDD + +FE V +H++F+GD+LI Sbjct: 4 PDKDQIFPIKHYHRLCFLKNLVRHPNIIVGDFTYYDDAENVENFEKNVKYHFDFLGDKLI 63 Query: 66 IGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADLPYKGDTVIGNDVW 125 IGKFC I +FIMNGANH+M +++TYPF I G W KA PE A+L KGDTVIGN+VW Sbjct: 64 IGKFCMIGSDVKFIMNGANHQMNAISTYPFGIFGYEWAKALPEKAELSSKGDTVIGNEVW 123 Query: 126 IGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALLLELKW 185 IG NATIMPGV IGDG+II NS VTK+VPPY I GNPAR++RKRF E I LL LKW Sbjct: 124 IGYNATIMPGVKIGDGAIIGTNSVVTKNVPPYAIVAGNPARVIRKRFSPEKIEQLLALKW 183 Query: 186 WDWSKEKITANLDVL 200 WDW EKIT NLD L Sbjct: 184 WDWEIEKITRNLDFL 198 >mlr4814 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Length = 301 Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 17/210 (8%), Positives = 38/210 (18%), Gaps = 2/210 (0%) Query: 5 GPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESR-VTHHYEFIGDQ 63 + + + + Y+ I Sbjct: 3 IDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVD 62 Query: 64 LIIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKA-TPELADLPYKGDTVIGN 122 + A+ +G V F + G W L L VI Sbjct: 63 TPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILA 122 Query: 123 DVWIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALLLE 182 + + N + + + ++ E E Sbjct: 123 VNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPE 182 Query: 183 LKWWDWSKEKITANLDVLCSNDLERIKGLA 212 D S+ + + + + Sbjct: 183 DYITDRSQRFMASEIIREKLMRFLGAELPY 212 >SMc01797 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Length = 216 Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 106/212 (50%), Positives = 142/212 (66%), Gaps = 3/212 (1%) Query: 1 MHSTGPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDDPDESVSFESR-VTHHYEF 59 +HS PDP A P ++ F++N V P I AG++SYYDDPD FE + V +HY+F Sbjct: 4 IHSA-PDPGAAFPVAEFPRIGFLRNIVRSPLIEAGEFSYYDDPDGPERFEEKCVLYHYDF 62 Query: 60 IGDQLIIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKA-TPELADLPYKGDT 118 +GD+L+IG+FCA+A G +FIMNGANH G +T+PF I G W P+ Y+GDT Sbjct: 63 VGDRLVIGRFCALATGIQFIMNGANHATGGFSTFPFGIFPGAWRDGFDPDAYRTGYRGDT 122 Query: 119 VIGNDVWIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIA 178 +GNDVWIG ATI+PGVTIGDG+I+AA + VTKDVPPY + GNPAR++R RF D I Sbjct: 123 TVGNDVWIGMEATILPGVTIGDGAIVAAKAVVTKDVPPYAVVAGNPARVVRLRFPDATIE 182 Query: 179 LLLELKWWDWSKEKITANLDVLCSNDLERIKG 210 L + WW W +K+T N+ + DL+ ++G Sbjct: 183 RLQAIAWWRWPIDKVTRNIAAITGADLDALEG 214 >CAC0777 [R] COG0110 Acetyltransferase (isoleucine patch superfamily) Length = 210 Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 97/208 (46%), Positives = 139/208 (66%), Gaps = 3/208 (1%) Query: 4 TGPDPNAVHPNPNIKQVRFIKNTVTRPNIIAGDYSYYDD-PDESVSFE-SRVTHHYEFIG 61 T P+ N ++P N Q ++KN +TR NI GDY+ Y+D +++ FE + V + Y G Sbjct: 2 TIPNLNKIYPRSNDYQTVYLKNVITRKNIEVGDYTIYNDFYNDARDFEKNNVLYQYPING 61 Query: 62 DQLIIGKFCAIARGTEFIMNGANHRMGSVTTYPFNIMGGGWEKATPELADL-PYKGDTVI 120 D+LIIGKFC+IA +F+MN +NH M S++TY F I W+ + + KGD VI Sbjct: 62 DKLIIGKFCSIACKAKFLMNSSNHSMKSLSTYTFPIFYEEWDLDVKRITEAWDNKGDIVI 121 Query: 121 GNDVWIGQNATIMPGVTIGDGSIIAANSTVTKDVPPYHIAGGNPARMLRKRFDDELIALL 180 GNDVWIG +A IM GV IGDG+II A + VTKDVPPY +A G PAR+++KRFDD++I+ L Sbjct: 122 GNDVWIGYDAVIMSGVKIGDGAIIGARAVVTKDVPPYTVAAGVPARVIKKRFDDDVISKL 181 Query: 181 LELKWWDWSKEKITANLDVLCSNDLERI 208 L++KWW+ EKI N+ S +++++ Sbjct: 182 LKIKWWNLPYEKIRENIQYFKSGNIDKL 209 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.318 0.138 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 18,393,748 Number of extensions: 783455 Number of successful extensions: 1912 Number of sequences better than 1.0e-05: 81 Number of HSP's gapped: 1884 Number of HSP's successfully gapped: 81 Length of query: 215 Length of database: 38,378,431 Length adjustment: 102 Effective length of query: 113 Effective length of database: 26,614,363 Effective search space: 3007423019 Effective search space used: 3007423019 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 113 (48.1 bits)