BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0097.p (142 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PH0581 [S] COG0432 Uncharacterized conserved protein 107 4e-24 PAB0941 [S] COG0432 Uncharacterized conserved protein 105 3e-23 TM1872 [S] COG0432 Uncharacterized conserved protein 102 2e-22 aq_1965 [S] COG0432 Uncharacterized conserved protein 90 9e-19 PAB0878 [S] COG0432 Uncharacterized conserved protein 89 3e-18 >PH0581 [S] COG0432 Uncharacterized conserved protein Length = 133 Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 7/135 (5%) Query: 5 KCIVLQTRSEFQMIKITEEIRQFVAGSGIKNGLAAVITAHTTTGIMVNEGLECVETDIEE 64 K I ++T EF++I IT+E+ + V S +K+G+ V T HTTT + +NE ++ DIEE Sbjct: 3 KSITIRTSREFEIIDITKEVERVVRESNVKSGIVVVFTRHTTTALTINENESGLKRDIEE 62 Query: 65 TLDRLIPKDAPYAHAHFLPSYGATGSNSPSHLKSMLSGNSCLFVVQDGIMVTGDAQDVYF 124 L +L+PK Y H +N+ SHL+ +L G S V+DG ++ G Q + F Sbjct: 63 ILSKLVPKGMNYFHDRI-------DNNAHSHLRGILLGPSLTIPVEDGRLLLGTWQSILF 115 Query: 125 VEFDGPKSRKVYIQV 139 VE DGP++R+VY++V Sbjct: 116 VELDGPRTREVYVKV 130 >PAB0941 [S] COG0432 Uncharacterized conserved protein Length = 133 Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 82/135 (60%), Gaps = 7/135 (5%) Query: 5 KCIVLQTRSEFQMIKITEEIRQFVAGSGIKNGLAAVITAHTTTGIMVNEGLECVETDIEE 64 + I ++T EF+++ IT+E+ + V S +K+GL V T HTTT + +NE ++ D+EE Sbjct: 3 RSIKVRTSKEFEIVDITDEVEKIVRESNVKSGLVVVFTRHTTTALTINENESGLKRDLEE 62 Query: 65 TLDRLIPKDAPYAHAHFLPSYGATGSNSPSHLKSMLSGNSCLFVVQDGIMVTGDAQDVYF 124 L +L+PK Y H +N+ SHL+ +L G S V+DG ++ G Q + F Sbjct: 63 LLGKLVPKGMGYMHDRI-------DNNAHSHLRGILIGPSLTIPVEDGRLLLGTWQSILF 115 Query: 125 VEFDGPKSRKVYIQV 139 +E DGP++R+VY++V Sbjct: 116 IELDGPRTREVYVKV 130 >TM1872 [S] COG0432 Uncharacterized conserved protein Length = 132 Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 80/137 (58%), Gaps = 10/137 (7%) Query: 5 KCIVLQTRSEFQMIKITEEIRQFVAGSGIKNGLAAVITAHTTTGIMVNEGLE-CVETDIE 63 K + ++T S Q + IT EI +F+ S ++NG+ V HTT GI +NE + V DI Sbjct: 3 KRLTVRTSSRTQFVDITSEIVKFIEESKVRNGICVVFVPHTTAGITINENADPSVRQDIM 62 Query: 64 ETLDRLIPKDAPYAHAHFLPSYGATGSNSPSHLKSMLSGNSCLFVVQDGIMVTGDAQDVY 123 TL++L+P A Y H N+ SH+K+ L G+S ++++G + G Q +Y Sbjct: 63 NTLNKLVPPSAGYTHLE---------GNADSHIKASLVGSSVTLIIENGRPLLGTWQGIY 113 Query: 124 FVEFDGPKSRKVYIQVM 140 F EFDGP++R VY++++ Sbjct: 114 FCEFDGPRTRSVYVKIV 130 >aq_1965 [S] COG0432 Uncharacterized conserved protein Length = 340 Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 14/135 (10%), Positives = 22/135 (16%), Gaps = 9/135 (6%) Query: 9 LQTRSEFQMIKITEEIRQFVAGSGIKNGLAAVITAHTTTGIMVNEGLEC-VETDIEETLD 67 L + EE+ + A I A M E E Sbjct: 7 LLRKIAEFENLTAEEMYNLMKEVAEGRATDAQIGALVMGTKMKGETPEEIEGAVKLFREK 66 Query: 68 RLIPKDAPYAHAHFLPSYGATGSNSPSHLKSMLSGNSCLFVVQDGIMVTGDAQDVYFVEF 127 + KS S + A+ Sbjct: 67 VVRVPVKD--------PEELVDVVGTGGDKSSTFNVSTVTGFVLAGAGVKVAKHGNRSVS 118 Query: 128 DGPKSRKVYIQVMGE 142 S + + Sbjct: 119 SKSGSADFLEALGAK 133 >PAB0878 [S] COG0432 Uncharacterized conserved protein Length = 137 Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 8/143 (5%) Query: 1 MVNTKCIVLQTRSEFQMIKITEEIRQFVAGSGIKNGLAAVITAHTTTGIMVNEGLECVET 60 +V +K + T+ E ++ IT E+ +FV S +KNG+ V T I+ E E + Sbjct: 2 VVISKELRFSTKGEIDLVDITREVEKFVEESNVKNGIVLVFVPGATGAIVAIEHEEGLLE 61 Query: 61 DIEETLDRLIPKDAPYAHAHFLPSYGATGSNSPSHLKSMLSGNSCLFVVQDGIMVTGDAQ 120 D + L +IP++ Y H F N+ SHL++ L G S F + DG +V G Q Sbjct: 62 DFKRFLREVIPRERSYLHNRF-------DDNAHSHLRATLLGPSLAFPIIDGRLVRGTWQ 114 Query: 121 DVYFVEFD-GPKSRKVYIQVMGE 142 ++FVE D P+SR+V +Q++GE Sbjct: 115 QIFFVELDTRPRSRRVILQIVGE 137 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.134 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 9,679,696 Number of extensions: 349710 Number of successful extensions: 1150 Number of sequences better than 1.0e-05: 13 Number of HSP's gapped: 1140 Number of HSP's successfully gapped: 13 Length of query: 142 Length of database: 38,378,431 Length adjustment: 96 Effective length of query: 46 Effective length of database: 27,306,367 Effective search space: 1256092882 Effective search space used: 1256092882 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 110 (47.0 bits)