BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0093.p (409 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC0762 [GEPR] COG0477 Permeases of the major facilitator superf... 634 0.0 lin0830 [GEPR] COG0477 Permeases of the major facilitator superf... 480 e-135 L104969 [GEPR] COG0477 Permeases of the major facilitator superf... 422 e-118 SPCC1281.04 [C] COG0667 Predicted oxidoreductases (related to ar... 156 5e-38 SPCC1281.06c_2 [CI] COG5274 Cytochrome b involved in lipid metab... 156 5e-38 >CAC0762 [GEPR] COG0477 Permeases of the major facilitator superfamily Length = 411 Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/406 (76%), Positives = 351/406 (86%) Query: 1 MFKFRSHKEQDTDQTIDKHALIFGLIAVFLCGIGFSIITPVVPFLVQPYISNPGEQAIVV 60 M KF+SH +T QTI+KHALIFGLI+VFL GIGF+II+PV+PFLVQPYI+NPG QAI+V Sbjct: 1 MSKFKSHNSNNTKQTINKHALIFGLISVFLSGIGFTIISPVIPFLVQPYINNPGNQAIIV 60 Query: 61 TLLTSVYAVCVFFAAPVLGALSDKYGRRPLLLICLLXXXXXXXXXXXXXXLWVLFAGRII 120 TLLTSVYA+C+FF+AP LGALSDKYGRRP+LL+CLL LWVLFAGRII Sbjct: 61 TLLTSVYAICMFFSAPGLGALSDKYGRRPVLLVCLLGSSIGYLIFGIGGALWVLFAGRII 120 Query: 121 EGVTGGSISTIFAYFADIIPAEQRTKYFGWVSAVVGAGTVIGPTLGGLLARFGYAVPMYF 180 +G+TGG+ISTIFAYFADIIP +RTKYFGWVSAVVG GT+IGPTLGGLLA+FGY+VP+YF Sbjct: 121 DGITGGTISTIFAYFADIIPENERTKYFGWVSAVVGVGTIIGPTLGGLLAKFGYSVPLYF 180 Query: 181 GAIITLLNVVYGFFFMPESLDKNHRLKEIALVRLNPFTQLANILSMKSLQRLLVSAFLLW 240 GAIITLLNVVYGFFFMPESLDKN RLKEI VRLNPFTQLAN+LS+KSL+RLL+SAFLLW Sbjct: 181 GAIITLLNVVYGFFFMPESLDKNIRLKEITFVRLNPFTQLANLLSIKSLKRLLISAFLLW 240 Query: 241 IPNGSLQAVFSQFTMDTFNWNPALIGLMFSIMGFQDILSQGLVMPKLLKKLSDQQIAVLG 300 IPNGSLQAVFSQFT+DTF+W PA+IGLMFSIMGFQDI+SQ L+MPKLL KLSD+ IA+LG Sbjct: 241 IPNGSLQAVFSQFTIDTFSWKPAIIGLMFSIMGFQDIISQSLIMPKLLVKLSDKYIAILG 300 Query: 301 MVSEMIGYSLIALSALFSFYPLLIAGMFIFGFGDSVFGPSFNGMLSKSVDXXXXXXXXXX 360 M+SE+IGYSLIA SALF FYPL IAGMFIFGFGDS+FGPSFNGMLSKSVD Sbjct: 301 MISEVIGYSLIAASALFYFYPLFIAGMFIFGFGDSIFGPSFNGMLSKSVDSSEQGRIQGG 360 Query: 361 XXXXXALARMLGPILGGQIYVSLGHAAPAVMGMILIGAALPVLYKR 406 ALARM+GPI+GGQIYVSLGHA PA MG++LI A+PVLYK Sbjct: 361 SQSIQALARMIGPIIGGQIYVSLGHATPAFMGIVLITVAIPVLYKN 406 >lin0830 [GEPR] COG0477 Permeases of the major facilitator superfamily Length = 403 Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust. Identities = 255/400 (63%), Positives = 316/400 (79%) Query: 10 QDTDQTIDKHALIFGLIAVFLCGIGFSIITPVVPFLVQPYISNPGEQAIVVTLLTSVYAV 69 T I+ L+FGLI+VFLCG+GFSII PVVPFL+ PY+SN EQA++VTLLTSVYA+ Sbjct: 2 SSTKSFINTKTLLFGLISVFLCGMGFSIIMPVVPFLIAPYVSNSSEQALMVTLLTSVYAL 61 Query: 70 CVFFAAPVLGALSDKYGRRPLLLICLLXXXXXXXXXXXXXXLWVLFAGRIIEGVTGGSIS 129 CVFFAAP LGALSD++GRRP+LLIC + LWVLF GRIIEG+TGGSIS Sbjct: 62 CVFFAAPGLGALSDRFGRRPVLLICFIGSAIGYFVFGLGGALWVLFLGRIIEGITGGSIS 121 Query: 130 TIFAYFADIIPAEQRTKYFGWVSAVVGAGTVIGPTLGGLLARFGYAVPMYFGAIITLLNV 189 T+FA+FADI P EQRTKYFGWVSA GAG +GP GG++A FGYA+P +FGA IT +N+ Sbjct: 122 TLFAFFADITPEEQRTKYFGWVSAAAGAGAALGPAFGGVIAHFGYAMPFFFGAAITFINL 181 Query: 190 VYGFFFMPESLDKNHRLKEIALVRLNPFTQLANILSMKSLQRLLVSAFLLWIPNGSLQAV 249 V+G+F+MPE+L + +RLK I L+RLNPF+QL NIL++K L RLL++AFL+WIPNGSLQAV Sbjct: 182 VFGYFYMPETLKEENRLKRIPLIRLNPFSQLLNILTIKHLGRLLIAAFLIWIPNGSLQAV 241 Query: 250 FSQFTMDTFNWNPALIGLMFSIMGFQDILSQGLVMPKLLKKLSDQQIAVLGMVSEMIGYS 309 SQF +D F+W PALIGLMFSIMG QDILSQ VMPKLL +LSD+QIA+LGM++E+IGY+ Sbjct: 242 MSQFAIDNFSWKPALIGLMFSIMGVQDILSQAFVMPKLLLRLSDKQIAILGMIAEIIGYA 301 Query: 310 LIALSALFSFYPLLIAGMFIFGFGDSVFGPSFNGMLSKSVDXXXXXXXXXXXXXXXALAR 369 LIA S++F LL+ GMF+FGFGDS+F P+FNGM+SKS +LAR Sbjct: 302 LIAASSIFILPQLLVIGMFVFGFGDSIFNPAFNGMVSKSASASEQGRIQGGSQAIQSLAR 361 Query: 370 MLGPILGGQIYVSLGHAAPAVMGMILIGAALPVLYKRTLP 409 ++GPI+GGQIY++LGHAAPAVMG+ILI A+ +LYKRT P Sbjct: 362 IIGPIIGGQIYITLGHAAPAVMGVILITVAIFILYKRTRP 401 >L104969 [GEPR] COG0477 Permeases of the major facilitator superfamily Length = 397 Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust. Identities = 211/390 (54%), Positives = 275/390 (70%), Gaps = 1/390 (0%) Query: 16 IDKHALIFGLIAVFLCGIGFSIITPVVPFLVQPYISNPGEQAIVVTLLTSVYAVCVFFAA 75 I+KHAL FGLI FL G+GF+II+PVVPF+V P+ +N +QA++VT L ++YA+C FFAA Sbjct: 3 INKHALTFGLITTFLTGLGFTIISPVVPFMVAPF-ANAHDQALIVTSLMAIYALCTFFAA 61 Query: 76 PVLGALSDKYGRRPLLLICLLXXXXXXXXXXXXXXLWVLFAGRIIEGVTGGSISTIFAYF 135 P LG+LSD++GR+P+LLI L LW+LF GRII+G+TGG+I T+FAYF Sbjct: 62 PALGSLSDRFGRKPILLISLAGSALGYLIFGLAGSLWMLFLGRIIDGLTGGNIVTLFAYF 121 Query: 136 ADIIPAEQRTKYFGWVSAVVGAGTVIGPTLGGLLARFGYAVPMYFGAIITLLNVVYGFFF 195 ADI E RTK FGW +A VG GT+ GPT+GGLLA FG +VP YFGA+I++ N++YG F Sbjct: 122 ADITDEENRTKVFGWTAAAVGVGTISGPTVGGLLAHFGNSVPFYFGALISIANLLYGAFV 181 Query: 196 MPESLDKNHRLKEIALVRLNPFTQLANILSMKSLQRLLVSAFLLWIPNGSLQAVFSQFTM 255 M ESL + HR + +L +LNPFTQL +L MK+L RLL + LLW+PNG+LQA+ SQF++ Sbjct: 182 MNESLPETHRTRNFSLKQLNPFTQLFQLLRMKNLNRLLFAGILLWLPNGALQAIISQFSL 241 Query: 256 DTFNWNPALIGLMFSIMGFQDILSQGLVMPKLLKKLSDQQIAVLGMVSEMIGYSLIALSA 315 D+F W P LIGL SIMG DIL+Q +MP+LLK ++ ++ L +V E+I Y L ALSA Sbjct: 242 DSFAWTPVLIGLAISIMGLMDILTQIFIMPRLLKLANEDKLIRLALVCEIIAYLLFALSA 301 Query: 316 LFSFYPLLIAGMFIFGFGDSVFGPSFNGMLSKSVDXXXXXXXXXXXXXXXALARMLGPIL 375 +P I MFIF FGDS+FG +FNG LSKS AL R++GP++ Sbjct: 302 FSKMWPFFILAMFIFAFGDSIFGTAFNGKLSKSATSSEQGKLQGGSQALQALTRVIGPLI 361 Query: 376 GGQIYVSLGHAAPAVMGMILIGAALPVLYK 405 GGQIY+SLGH APA+MG I + AL VL K Sbjct: 362 GGQIYISLGHFAPALMGFIFLIIALLVLSK 391 >SPCC1281.04 [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Length = 346 Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 0/361 (0%), Positives = 0/361 (0%), Gaps = 9/361 (2%) Query: 18 KHALIFGLIAVFLCGIGFSIITPVVPFLVQPYISNPGEQAIVVT---LLTSVYAVCVFFA 74 + A I + E + + A Sbjct: 181 ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLN--RSFEVGLAEVSQYEGVELLAYSCLGF 238 Query: 75 APVLGALSDKYGRRPLLLICLLXXXXXXXXXXXXXXLWVLFAGRIIEGVTGGSISTIFAY 134 + G + + R Sbjct: 239 GTLTGKYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRR 298 Query: 135 FADIIPAEQRTKYFGWVSAVVGAGTVIGPTLGGLLARFGYAVPMYFGAIITLLNVVYGFF 194 Sbjct: 299 358 Query: 195 FMPESLDKNHRLKEIALVRLNPFTQLANILSMKSLQRLLVSAFLLWIPNGSLQAVFSQFT 254 Sbjct: 359 418 Query: 255 MDTFNWNPALIGLMFSIMGFQDILSQGLVMPKLLKKLSDQQIAVLGMVSEMIGYSLIALS 314 Sbjct: 419 478 Query: 315 ALFSFYPLLIAGMFIFGFGDSVFGPSFNGMLSKSVDXXXXXXXXXXXXXXXALARMLGPI 374 Sbjct: 479 ---- 534 Query: 375 L 375 Sbjct: 535 535 >SPCC1281.06c_2 [CI] COG5274 Cytochrome b involved in lipid metabolism Length = 123 Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 0/361 (0%), Positives = 0/361 (0%), Gaps = 9/361 (2%) Query: 18 KHALIFGLIAVFLCGIGFSIITPVVPFLVQPYISNPGEQAIVVT---LLTSVYAVCVFFA 74 Sbjct: 181 -- 238 Query: 75 APVLGALSDKYGRRPLLLICLLXXXXXXXXXXXXXXLWVLFAGRIIEGVTGGSISTIFAY 134 Sbjct: 239 298 Query: 135 FADIIPAEQRTKYFGWVSAVVGAGTVIGPTLGGLLARFGYAVPMYFGAIITLLNVVYGFF 194 Sbjct: 299 358 Query: 195 FMPESLDKNHRLKEIALVRLNPFTQLANILSMKSLQRLLVSAFLLWIPNGSLQAVFSQFT 254 Sbjct: 359 418 Query: 255 MDTFNWNPALIGLMFSIMGFQDILSQGLVMPKLLKKLSDQQIAVLGMVSEMIGYSLIALS 314 Sbjct: 419 478 Query: 315 ALFSFYPLLIAGMFIFGFGDSVFGPSFNGMLSKSVDXXXXXXXXXXXXXXXALARMLGPI 374 Sbjct: 479 ---- 534 Query: 375 L 375 Sbjct: 535 535 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.329 0.145 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 27,593,849 Number of extensions: 1126116 Number of successful extensions: 4633 Number of sequences better than 1.0e-05: 56 Number of HSP's gapped: 4599 Number of HSP's successfully gapped: 57 Length of query: 409 Length of database: 38,378,431 Length adjustment: 109 Effective length of query: 300 Effective length of database: 25,807,025 Effective search space: 7742107500 Effective search space used: 7742107500 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 117 (49.7 bits)