BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0599.0068.p (291 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll1981 [IQR] COG1028 Dehydrogenases with different specificitie... 166 3e-41 AGl2880 [R] COG4618 ABC-type protease/lipase transport system, A... 166 5e-41 AGl2875 [P] COG1629 Outer membrane receptor proteins, mostly Fe ... 166 5e-41 AGl2827 [R] COG1011 Predicted hydrolase (HAD superfamily) 166 5e-41 AGl2810_2 [E] COG1126 ABC-type polar amino acid transport system... 166 5e-41 >mll1981 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Length = 200 Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 0/247 (0%), Positives = 0/247 (0%), Gaps = 15/247 (6%) Query: 46 ALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQSGGNACVIGADLGTL 105 + A + G + RQ + L + Sbjct: 21 RNRLNIRQQQRLEQAAYEMTALRAATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREV 80 Query: 106 DGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESFDEVMRINVKAPLFV 165 D + + + + L + F E + + Sbjct: 81 DIYQGDTPFCHFAY------IEKEGNALMQDLEEEGYLVGLEKAKFVERLAHYYCEINVL 134 Query: 166 TQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLLAKQLGPRNITVNAI 225 + + + + + + Sbjct: 135 HPFRVGSGLAQRIFFEQLAIHAGYQLSWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVS 194 Query: 226 QPGIINTEM----NAGTLQNPEGQKYAAGLSAFNRWGEPEDIADIAAFLAARDSRWVTGQ 281 Sbjct: 195 ----- 249 Query: 282 LLDASGG 288 Sbjct: 250 256 >AGl2880 [R] COG4618 ABC-type protease/lipase transport system, ATPase and permease components Length = 249 Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/250 (38%), Positives = 144/250 (57%), Gaps = 7/250 (2%) Query: 40 RLEGQLALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQSGGNACVIG 99 RL+G++A+ITGAS+G+G +IA A EGA + V+Y +S AEAVV +I +GG A + Sbjct: 4 RLQGKIAVITGASKGLGAAIARSFAAEGASVVVNYSSSKSAAEAVVEEIIDAGGTAIAVK 63 Query: 100 ADLGTLDGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESFDEVMRINV 159 AD+ + +LF++ + DILVNNAG+ LE + + F + M +NV Sbjct: 64 ADMSEPAEVEELFAATNAAFGR------VDILVNNAGVYDFQPLENLSIDLFRKHMELNV 117 Query: 160 KAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLLAKQLGPRN 219 L ++A+ + +GG I+N+SS VT + Y+ SKGAID T+ L+ +L PR Sbjct: 118 FGYLLAIKEAVKYMAEGGSIVNMSSTVTIFGPENASVYTASKGAIDGLTRALSNELAPRK 177 Query: 220 ITVNAIQPGIINTE-MNAGTLQNPEGQKYAAGLSAFNRWGEPEDIADIAAFLAARDSRWV 278 I VNAI+PG+++T+ + AG + + + R G PEDI A FLA+ +S W Sbjct: 178 IRVNAIKPGVVDTDGVQAGGFLHFDFGPMIMAQTPLKRLGVPEDIIPAAIFLASDESSWT 237 Query: 279 TGQLLDASGG 288 TG+ +GG Sbjct: 238 TGEFFILAGG 247 >AGl2875 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Length = 249 Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/250 (38%), Positives = 144/250 (57%), Gaps = 7/250 (2%) Query: 40 RLEGQLALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQSGGNACVIG 99 RL+G++A+ITGAS+G+G +IA A EGA + V+Y +S AEAVV +I +GG A + Sbjct: 4 RLQGKIAVITGASKGLGAAIARSFAAEGASVVVNYSSSKSAAEAVVEEIIDAGGTAIAVK 63 Query: 100 ADLGTLDGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESFDEVMRINV 159 AD+ + +LF++ + DILVNNAG+ LE + + F + M +NV Sbjct: 64 ADMSEPAEVEELFAATNAAFGR------VDILVNNAGVYDFQPLENLSIDLFRKHMELNV 117 Query: 160 KAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLLAKQLGPRN 219 L ++A+ + +GG I+N+SS VT + Y+ SKGAID T+ L+ +L PR Sbjct: 118 FGYLLAIKEAVKYMAEGGSIVNMSSTVTIFGPENASVYTASKGAIDGLTRALSNELAPRK 177 Query: 220 ITVNAIQPGIINTE-MNAGTLQNPEGQKYAAGLSAFNRWGEPEDIADIAAFLAARDSRWV 278 I VNAI+PG+++T+ + AG + + + R G PEDI A FLA+ +S W Sbjct: 178 IRVNAIKPGVVDTDGVQAGGFLHFDFGPMIMAQTPLKRLGVPEDIIPAAIFLASDESSWT 237 Query: 279 TGQLLDASGG 288 TG+ +GG Sbjct: 238 TGEFFILAGG 247 >AGl2827 [R] COG1011 Predicted hydrolase (HAD superfamily) Length = 249 Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/250 (38%), Positives = 144/250 (57%), Gaps = 7/250 (2%) Query: 40 RLEGQLALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQSGGNACVIG 99 RL+G++A+ITGAS+G+G +IA A EGA + V+Y +S AEAVV +I +GG A + Sbjct: 4 RLQGKIAVITGASKGLGAAIARSFAAEGASVVVNYSSSKSAAEAVVEEIIDAGGTAIAVK 63 Query: 100 ADLGTLDGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESFDEVMRINV 159 AD+ + +LF++ + DILVNNAG+ LE + + F + M +NV Sbjct: 64 ADMSEPAEVEELFAATNAAFGR------VDILVNNAGVYDFQPLENLSIDLFRKHMELNV 117 Query: 160 KAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLLAKQLGPRN 219 L ++A+ + +GG I+N+SS VT + Y+ SKGAID T+ L+ +L PR Sbjct: 118 FGYLLAIKEAVKYMAEGGSIVNMSSTVTIFGPENASVYTASKGAIDGLTRALSNELAPRK 177 Query: 220 ITVNAIQPGIINTE-MNAGTLQNPEGQKYAAGLSAFNRWGEPEDIADIAAFLAARDSRWV 278 I VNAI+PG+++T+ + AG + + + R G PEDI A FLA+ +S W Sbjct: 178 IRVNAIKPGVVDTDGVQAGGFLHFDFGPMIMAQTPLKRLGVPEDIIPAAIFLASDESSWT 237 Query: 279 TGQLLDASGG 288 TG+ +GG Sbjct: 238 TGEFFILAGG 247 >AGl2810_2 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Length = 249 Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 95/250 (38%), Positives = 144/250 (57%), Gaps = 7/250 (2%) Query: 40 RLEGQLALITGASRGIGRSIALRLAQEGAYIAVHYGKRRSEAEAVVHQIRQSGGNACVIG 99 RL+G++A+ITGAS+G+G +IA A EGA + V+Y +S AEAVV +I +GG A + Sbjct: 4 RLQGKIAVITGASKGLGAAIARSFAAEGASVVVNYSSSKSAAEAVVEEIIDAGGTAIAVK 63 Query: 100 ADLGTLDGIRDLFSSLDDVIREQTDGSGFDILVNNAGIGQMVTLEETTEESFDEVMRINV 159 AD+ + +LF++ + DILVNNAG+ LE + + F + M +NV Sbjct: 64 ADMSEPAEVEELFAATNAAFGR------VDILVNNAGVYDFQPLENLSIDLFRKHMELNV 117 Query: 160 KAPLFVTQQALPRLKDGGRIINISSFVTRAASPSVFCYSMSKGAIDTFTQLLAKQLGPRN 219 L ++A+ + +GG I+N+SS VT + Y+ SKGAID T+ L+ +L PR Sbjct: 118 FGYLLAIKEAVKYMAEGGSIVNMSSTVTIFGPENASVYTASKGAIDGLTRALSNELAPRK 177 Query: 220 ITVNAIQPGIINTE-MNAGTLQNPEGQKYAAGLSAFNRWGEPEDIADIAAFLAARDSRWV 278 I VNAI+PG+++T+ + AG + + + R G PEDI A FLA+ +S W Sbjct: 178 IRVNAIKPGVVDTDGVQAGGFLHFDFGPMIMAQTPLKRLGVPEDIIPAAIFLASDESSWT 237 Query: 279 TGQLLDASGG 288 TG+ +GG Sbjct: 238 TGEFFILAGG 247 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.319 0.135 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 20,613,597 Number of extensions: 855913 Number of successful extensions: 2835 Number of sequences better than 1.0e-05: 350 Number of HSP's gapped: 2188 Number of HSP's successfully gapped: 350 Length of query: 291 Length of database: 38,378,431 Length adjustment: 105 Effective length of query: 186 Effective length of database: 26,268,361 Effective search space: 4885915146 Effective search space used: 4885915146 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 115 (48.9 bits)