BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0596.0001.p
         (1129 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CAC0332 [G] COG4124 Beta-mannanase                                     60   2e-08
CAC0539_1 [G] COG4124 Beta-mannanase                                   55   9e-07

>CAC0332 [G] COG4124 Beta-mannanase
          Length = 355

 Score = 60.1 bits (144), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 56/127 (44%), Gaps = 12/127 (9%)

Query: 374 VLWRPLHEAEGGWFWWGAKGPEPAKRLWKLMVDRLTSHHH-LNNLIWVWNSEKPE----- 427
           V +RP HE  G WFWWG K     K+LW  + D L S +     L W+     P      
Sbjct: 178 VYFRPFHEVNGNWFWWGDKDVSQYKQLWINLHDYLVSKNSGCRGLTWLKFCYAPNSGKNA 237

Query: 428 --WYPGDDVVDIASVDIY--NPAGDYNPSIAKYENLVSLVNGKKVIGLAENGPIPDPEML 483
             +YPGDD VD+  +D Y  NP+ D     A  E      NG    G+ +  P   PE+ 
Sbjct: 238 ALYYPGDDYVDMVGMDAYSDNPSTDTYVKRAYAELTGGTYNGVTYPGIDK--PFGFPELG 295

Query: 484 QAYGADW 490
              G D+
Sbjct: 296 PNVGGDY 302


>CAC0539_1 [G] COG4124 Beta-mannanase
          Length = 345

 Score = 54.7 bits (130), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 18/159 (11%)

Query: 348 EDYHLLIRDI-DEIAIQLKRLQ--NAGVPVLWRPLHEAEGGWFWWGAKGPEPAKRLWKLM 404
           ++Y  +I  I DEI    ++L   NA   + +RP HE    WFWWG       K+LW  +
Sbjct: 139 QNYKTMISRIGDEIYNYHQKLNTYNANATIYYRPFHEMNASWFWWGEHDSNQFKQLWINI 198

Query: 405 VDRLTSHHHLNNLIWVWNSEKP-----------EWYPGDDVVDIASVDIYNPAGDYNPSI 453
            D L +   L+ L + +++ +            ++YPG   VD   +D Y+   + +  +
Sbjct: 199 HDYLVNTRGLSWLKFCYSANESITTDSNVKDALDYYPGGQYVDNVGLDGYSDDPENDGDV 258

Query: 454 AK-YENLV-SLVNGKKVIGLAENGPIPDPEMLQAYGADW 490
            K Y  LV    NG+   GL +  P    E+    G D+
Sbjct: 259 KKTYAELVGGTYNGQTYQGLGK--PFGFTELGPKVGGDY 295


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.315    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 86,919,406
Number of extensions: 3984703
Number of successful extensions: 12645
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 12642
Number of HSP's successfully gapped: 3
Length of query: 1129
Length of database: 38,378,431
Length adjustment: 117
Effective length of query: 1012
Effective length of database: 24,884,353
Effective search space: 25182965236
Effective search space used: 25182965236
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 121 (51.2 bits)