BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0586.0020.p
         (72 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH2420 [M] COG0750 Predicted membrane-associated Zn-dependent pr...    95   2e-20
BS_yluC [M] COG0750 Predicted membrane-associated Zn-dependent p...    81   3e-16
SP0263 [M] COG0750 Predicted membrane-associated Zn-dependent pr...    77   8e-15
STM0890 [ET] COG0834 ABC-type amino acid transport/signal transd...    64   7e-11
CAC1796 [M] COG0750 Predicted membrane-associated Zn-dependent p...    61   3e-10

>BH2420 [M] COG0750 Predicted membrane-associated Zn-dependent proteases
          1
          Length = 420

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/49 (81%), Positives = 44/49 (89%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETQFTLRLLPFGGYAR 69
          HEWGH YFAKRAGIL REFAIGFGPKLFS+KRNET +T+RL+P GGY R
Sbjct: 18 HEWGHLYFAKRAGILCREFAIGFGPKLFSWKRNETVYTIRLIPLGGYVR 66


>BS_yluC [M] COG0750 Predicted membrane-associated Zn-dependent proteases
          1
          Length = 422

 Score = 81.3 bits (199), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/49 (69%), Positives = 41/49 (83%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETQFTLRLLPFGGYAR 69
          HE GH   A+RAGIL REFAIGFGPK+FS+K+NET +T+RLLP GG+ R
Sbjct: 20 HELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVR 68


>SP0263 [M] COG0750 Predicted membrane-associated Zn-dependent proteases
          1
          Length = 419

 Score = 76.6 bits (187), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/50 (62%), Positives = 43/50 (86%), Gaps = 1/50 (2%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSY-KRNETQFTLRLLPFGGYAR 69
          HE+GH+YFAK++GILVREFAIG GPK+F++  ++ T +T+R+LP GGY R
Sbjct: 18 HEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVR 67


>STM0890 [ET] COG0834 ABC-type amino acid transport/signal transduction
          systems, periplasmic component/domain
          Length = 243

 Score = 63.5 bits (153), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 1/49 (2%), Positives = 8/49 (16%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETQFTLRLLPFGGYAR 69
                             ++    K+  +  +      + +       
Sbjct: 17 ATAAQTIRFATEASYPPFESMDANNKIVGFDVDLANALCKEIDASCTFT 65


>CAC1796 [M] COG0750 Predicted membrane-associated Zn-dependent proteases
          1
          Length = 339

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/49 (53%), Positives = 32/49 (65%)

Query: 21 HEWGHYYFAKRAGILVREFAIGFGPKLFSYKRNETQFTLRLLPFGGYAR 69
          HE GH+  AK   + V EFAIG GPKL   K  ETQ+++R LP GGY +
Sbjct: 20 HELGHFVLAKLNDVKVEEFAIGMGPKLLGIKGKETQYSIRALPIGGYVK 68


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.330    0.147    0.482 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 3,880,458
Number of extensions: 109349
Number of successful extensions: 442
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 441
Number of HSP's successfully gapped: 9
Length of query: 72
Length of database: 38,378,431
Length adjustment: 43
Effective length of query: 29
Effective length of database: 33,419,069
Effective search space: 969153001
Effective search space used: 969153001
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 109 (46.6 bits)