BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0586.0003.p (328 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH2406 [G] COG0726 Predicted xylanase/chitin deacetylase 295 8e-80 BS_ylxY [G] COG0726 Predicted xylanase/chitin deacetylase 270 3e-72 BH0243 [G] COG0726 Predicted xylanase/chitin deacetylase 114 3e-25 BS_ybaN [G] COG0726 Predicted xylanase/chitin deacetylase 108 2e-23 SPy1370_2 [G] COG0726 Predicted xylanase/chitin deacetylase 98 2e-20 >BH2406 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 323 Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 139/306 (45%), Positives = 201/306 (65%), Gaps = 11/306 (3%) Query: 22 TYGPVK-----EMLAQLKPQTGLAVWGRVYTEAQDDLRASIESKAAKLNSPPVDATVDRV 76 TYG V+ + + QLK + L V + D L I+ +A + P +DA +DRV Sbjct: 18 TYGAVQNPFSSQYIGQLK-EEALPV-----AKMTDSLYEEIKDRAPEYEQPAIDAKIDRV 71 Query: 77 WKAIPGYNGLEVDVEATYREAKLKGPNDGLKLLYRQIKPKVSLDDLGAQPIYRGNPAKPM 136 WKAIPGYNGLEVDVE++Y K +G D L++R+ KP V LDDL P++RGNP KPM Sbjct: 72 WKAIPGYNGLEVDVESSYNRMKQEGRFDERYLVFRETKPSVHLDDLPPSPVFRGNPEKPM 131 Query: 137 VSLMINVAWGNQYIIPMLDILDQEKVKVTFFLDGSWLSRNKELAAEMLKRGHEMENHAYT 196 V+L++NVAWGN+++ ML +++ VK TFFLDGSW+ ++ +LA +++ GHE+ NHAY+ Sbjct: 132 VTLLVNVAWGNEHLPTMLKTMNKYDVKSTFFLDGSWVKKHPQLATMIVEEGHEIGNHAYS 191 Query: 197 HPNMSTLSRARATAEIQKTQNLLKESLGVTNIWFAPPSGDFDQETVDIAASLGLKTVLWT 256 HP+M L+R R EI +T ++K ++ VT WFAPPSG ++ V AA G++T++W+ Sbjct: 192 HPDMQRLTRERMDEEIVQTNEVIKATIEVTPKWFAPPSGSYNDLVVQRAAEHGMRTIMWS 251 Query: 257 LDTVDWRNPSPDXXXXXXXXQAEPGTLILMHPTASSSQALRGMIRGIKAKGLQLGTVSQT 316 +DT+DWRNP P+ + PG +ILMHPT SS+ L +IRGI+ +GL +GTVS Sbjct: 252 VDTIDWRNPDPNEMVDRVLSKVHPGAMILMHPTESSAAGLENLIRGIQDRGLHIGTVSDL 311 Query: 317 LSAERV 322 + R+ Sbjct: 312 MDESRI 317 >BS_ylxY [G] COG0726 Predicted xylanase/chitin deacetylase Length = 319 Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 122/277 (44%), Positives = 184/277 (66%) Query: 47 TEAQDDLRASIESKAAKLNSPPVDATVDRVWKAIPGYNGLEVDVEATYREAKLKGPNDGL 106 T ++D L + KA + P +A +D+VWK+IPGYNGL+V++E +Y++ K G Sbjct: 42 TASKDPLYEELLQKAPEYEVKPQNARIDKVWKSIPGYNGLKVNIEQSYKKMKQHGKFREK 101 Query: 107 KLLYRQIKPKVSLDDLGAQPIYRGNPAKPMVSLMINVAWGNQYIIPMLDILDQEKVKVTF 166 L+Y Q+KP V L+ L +PIY+GNP KPMV+ +INVAWGN+Y+ ML IL + +VK TF Sbjct: 102 DLVYSQVKPSVHLESLQPEPIYKGNPDKPMVAFLINVAWGNEYLEKMLPILQKHQVKATF 161 Query: 167 FLDGSWLSRNKELAAEMLKRGHEMENHAYTHPNMSTLSRARATAEIQKTQNLLKESLGVT 226 FL+G+W+ N +LA ++ K GHE+ NH+Y HP+MS L+ R + ++ KT +++++GV Sbjct: 162 FLEGNWVRNNVQLAKKIAKDGHEIGNHSYNHPDMSKLTTGRISEQLDKTNEQIEQTIGVK 221 Query: 227 NIWFAPPSGDFDQETVDIAASLGLKTVLWTLDTVDWRNPSPDXXXXXXXXQAEPGTLILM 286 WFAPPSG F + +DIAA + TV+WT+DT+DW+ P+P + G +ILM Sbjct: 222 PKWFAPPSGSFRKAVIDIAAEKQMGTVMWTVDTIDWQKPAPSVLQTRVLSKIHNGAMILM 281 Query: 287 HPTASSSQALRGMIRGIKAKGLQLGTVSQTLSAERVL 323 HPT ++++L +I IK KG LGTV++ + R+L Sbjct: 282 HPTDPTAESLEALITQIKDKGYALGTVTELMDETRLL 318 >BH0243 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 253 Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 105/200 (52%), Gaps = 4/200 (2%) Query: 123 GAQPIYRGNPAKPMVSLMINVAWGNQYIIPMLDILDQEKVK-VTFFLDGSWLSRNKELAA 181 G Q ++ + + +L N++WG Q + P++D+L +KV+ TFF+ SW R+ EL Sbjct: 44 GPQAFHKAETDEKVAALTFNISWGEQRVKPIIDVLQSKKVEEATFFISASWAERHPELVE 103 Query: 182 EMLKRGHEMENHAYTHPNMSTLSRARATAEIQKTQNLLKESLGVTNIWFAPPSGDFDQET 241 + + G+ + +H Y + N +T + +++++Q ++ G PP+GDFD+ Sbjct: 104 LIQEAGYHIGSHGYQYKNYTTWEDEKIRKDLRQSQQVISSITGEKPTLLRPPNGDFDKRV 163 Query: 242 VDIAASLGLKTVLWTLDTVDWRNPSPDXXXXXXXXQAEPGTLILMHPTASSSQ---ALRG 298 +++A S V W++++ D+ NP D PG ++LMH + S+ Q AL Sbjct: 164 LNLAESYDYTVVHWSINSRDYENPGVDAIVRQVVDHISPGDIVLMHASDSAKQTHKALPI 223 Query: 299 MIRGIKAKGLQLGTVSQTLS 318 +I +K KG ++ + ++ Sbjct: 224 IIDQLKGKGYHFRSIEELMA 243 >BS_ybaN [G] COG0726 Predicted xylanase/chitin deacetylase Length = 125 Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 0/213 (0%), Positives = 0/213 (0%), Gaps = 6/213 (2%) Query: 121 DLGAQPIYRGNPAKPMVSLMINVAWGNQYIIPMLDILDQEKVK-VTFFLDGSWLSRNKEL 179 + IL ++ + R L Sbjct: 43 SPRFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL 102 Query: 180 AAEMLKRGHEMENHAYTHPNMSTLSRARATAEIQKTQNLLKESLGVTNI-WFAPPSGDFD 238 Sbjct: 103 - 161 Query: 239 QETVDIAASLGLKTVLWTLDTVDWRNPSPDXXXXXXXXQAEPGTLILMHPTASSSQ---A 295 Sbjct: 162 221 Query: 296 LRGMIRGIKAKGLQLGTVSQTLSAERVLPADVE 328 Sbjct: 222 254 >SPy1370_2 [G] COG0726 Predicted xylanase/chitin deacetylase Length = 223 Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 4/164 (2%) Query: 153 MLDILDQEKVKVTFFLDGSWLSRNKELAAEMLKRGHEMENHAYTHPNMSTLSRARATAEI 212 +LDIL + + K TFF+ GS + N+ L + GHE+ NH + HPN++ LS + ++ Sbjct: 58 VLDILAKYQAKGTFFMIGSKVVNNENLTKRVSDAGHEIANHTWDHPNLTNLSVSEIQHQV 117 Query: 213 QKTQNLLKESLGVTNIWFAPPSGDFDQETVDIAASLGLKTVLWTLDTVDWRNPSPDXXXX 272 T ++++ G + PP G + S GL +LWT+DT DW N S D Sbjct: 118 NMTNQAIEKACGKKPRYLRPPYG---ATNATVQQSSGLTQMLWTVDTRDWENHSTDGIMT 174 Query: 273 XXXXQAEPGTLILMHPTASSS-QALRGMIRGIKAKGLQLGTVSQ 315 Q +PG ++LMH ++ AL ++ +KA+G + TVS+ Sbjct: 175 NVKNQLQPGGVVLMHDIHQTTINALPTVMEYLKAEGYECVTVSE 218 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.314 0.131 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 21,367,362 Number of extensions: 851079 Number of successful extensions: 1077 Number of sequences better than 1.0e-05: 30 Number of HSP's gapped: 1059 Number of HSP's successfully gapped: 30 Length of query: 328 Length of database: 38,378,431 Length adjustment: 107 Effective length of query: 221 Effective length of database: 26,037,693 Effective search space: 5754330153 Effective search space used: 5754330153 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 116 (49.3 bits)