BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0584.0061.p (247 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BH1885 [S] COG2357 Uncharacterized protein conserved in bacteria 287 8e-78 Cgl1151 [S] COG2357 Uncharacterized protein conserved in bacteria 233 2e-61 BS_ywaC [S] COG2357 Uncharacterized protein conserved in bacteria 224 1e-58 lin0794 [S] COG2357 Uncharacterized protein conserved in bacteria 223 3e-58 CAC3340 [S] COG2357 Uncharacterized protein conserved in bacteria 209 3e-54 >BH1885 [S] COG2357 Uncharacterized protein conserved in bacteria Length = 251 Score = 287 bits (735), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 136/230 (59%), Positives = 183/230 (79%), Gaps = 2/230 (0%) Query: 9 IEKFKQLKYELTRFMMIYKFALEEMETKIEILKQEFQMLHDYSPIEHTKSRIKSPESIMN 68 +++ K LK ELTRFMM YKFAL+E+ TKI+ILKQEFQ +HDY+PIEH SR+KSPESI+N Sbjct: 8 VKQLKILKTELTRFMMSYKFALQELNTKIDILKQEFQYIHDYNPIEHVSSRVKSPESIVN 67 Query: 69 KMLRKNNELSLPAIRATIKDIAGLRITCSFISDIYQVSAMLQKQDDLKVLGVKDYIKHPK 128 K+ R+ N+ +L +IR ++DIAG+RITCSF SDIY +S L +Q D+ V+ KDYIK+PK Sbjct: 68 KIQRRGNDFTLESIRENVRDIAGIRITCSFESDIYTLSEQLMQQHDISVVETKDYIKNPK 127 Query: 129 PNGYQSLHLLVEVPVFLSDCQEHVCVEVQIRTIAMDFWASLEHKIFYKYSQSVPEHLTRE 188 PNGY+SLHL++ +P+F+SD + V VEVQIRTIAMDFWASLEHKI+YKY+++VPEHL +E Sbjct: 128 PNGYRSLHLILSIPIFMSDRVQDVYVEVQIRTIAMDFWASLEHKIYYKYNKNVPEHLLKE 187 Query: 189 LKNAADKAYELDLQMERLHREIKEIKDAQGDDTDVELRRIMINNQQFNLP 238 LK+AA+ A LD +ME++ E+ KD Q D+ E ++I+N+ F+LP Sbjct: 188 LKDAAESAALLDQKMEKIQHEMSAWKDRQTDED--ERYELIIDNETFSLP 235 >Cgl1151 [S] COG2357 Uncharacterized protein conserved in bacteria Length = 210 Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 107/183 (58%), Positives = 142/183 (77%) Query: 7 DQIEKFKQLKYELTRFMMIYKFALEEMETKIEILKQEFQMLHDYSPIEHTKSRIKSPESI 66 ++I+ K + ELT FM+ Y+F ++E+ TKI ILK EF LH+Y+PIEH SR+K+PESI Sbjct: 15 ERIQMIKNFRNELTGFMLNYQFGIDEILTKINILKTEFSQLHEYAPIEHVSSRLKTPESI 74 Query: 67 MNKMLRKNNELSLPAIRATIKDIAGLRITCSFISDIYQVSAMLQKQDDLKVLGVKDYIKH 126 + K++RK +ELSL AI+ T+ DIAG+RI CSF+ D Y ++ ML Q D+ V+ KDYI + Sbjct: 75 VKKVIRKGDELSLAAIKDTVFDIAGIRIVCSFLKDAYAIADMLTNQKDVTVIEAKDYIAN 134 Query: 127 PKPNGYQSLHLLVEVPVFLSDCQEHVCVEVQIRTIAMDFWASLEHKIFYKYSQSVPEHLT 186 PKPNGY+SLHL+++VPVFLS+ E V VEVQIRTIAMDFWASLEHKI+YK+ Q VP+ + Sbjct: 135 PKPNGYKSLHLILQVPVFLSNSVEKVNVEVQIRTIAMDFWASLEHKIYYKFEQEVPQSIL 194 Query: 187 REL 189 EL Sbjct: 195 DEL 197 >BS_ywaC [S] COG2357 Uncharacterized protein conserved in bacteria Length = 210 Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 103/188 (54%), Positives = 149/188 (79%) Query: 23 MMIYKFALEEMETKIEILKQEFQMLHDYSPIEHTKSRIKSPESIMNKMLRKNNELSLPAI 82 +++YKFAL+ ++TK I+ QE+ ++H ++PIEHTKSR+KS ESI+NK++RK E++ + Sbjct: 22 LLVYKFALDALDTKFSIISQEYNLIHGHNPIEHTKSRVKSFESIVNKLMRKGCEITTKEM 81 Query: 83 RATIKDIAGLRITCSFISDIYQVSAMLQKQDDLKVLGVKDYIKHPKPNGYQSLHLLVEVP 142 + I DIAG+RI CSFISDIY V +L++ +DL+++ VKDYI+ PKPNGY+SLHL++E+P Sbjct: 82 KEHIHDIAGVRIICSFISDIYNVVNVLKQHEDLRIVKVKDYIQTPKPNGYRSLHLIIEMP 141 Query: 143 VFLSDCQEHVCVEVQIRTIAMDFWASLEHKIFYKYSQSVPEHLTRELKNAADKAYELDLQ 202 V L++ E+V E+QIRTIAMDFWASLEHKI+YK + VP+ LT ELK AA+ A+ LD + Sbjct: 142 VNLTNRVEYVKAEIQIRTIAMDFWASLEHKIYYKLNNDVPKQLTDELKEAAEIAHYLDEK 201 Query: 203 MERLHREI 210 M + +E+ Sbjct: 202 MLGIKKEV 209 >lin0794 [S] COG2357 Uncharacterized protein conserved in bacteria Length = 212 Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 104/193 (53%), Positives = 147/193 (76%) Query: 23 MMIYKFALEEMETKIEILKQEFQMLHDYSPIEHTKSRIKSPESIMNKMLRKNNELSLPAI 82 M++++FALEE+ TK++IL +EFQ +HDY+P+EH KSR+KS ESI K+ +KN +++ Sbjct: 16 MLLHRFALEEVNTKLKILNEEFQFIHDYNPMEHLKSRVKSLESIGAKLEKKNVDITPENA 75 Query: 83 RATIKDIAGLRITCSFISDIYQVSAMLQKQDDLKVLGVKDYIKHPKPNGYQSLHLLVEVP 142 + DIAG+RITCSF+SDI+++ ML Q D+ + VKDY+ +PKPNGY+SLHLL EVP Sbjct: 76 LKYVHDIAGIRITCSFVSDIFRIHEMLAGQSDITIKRVKDYVTNPKPNGYRSLHLLCEVP 135 Query: 143 VFLSDCQEHVCVEVQIRTIAMDFWASLEHKIFYKYSQSVPEHLTRELKNAADKAYELDLQ 202 VFL++ E + VE+QIRT+AMDFWASLEHKI+YKY Q PE L +EL++AA LD + Sbjct: 136 VFLTNRSEKMTVEIQIRTVAMDFWASLEHKIYYKYQQEAPEELVKELQDAARIITHLDEK 195 Query: 203 MERLHREIKEIKD 215 M+ L+ +I + K+ Sbjct: 196 MKNLNDQIDKYKN 208 >CAC3340 [S] COG2357 Uncharacterized protein conserved in bacteria Length = 217 Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 97/196 (49%), Positives = 145/196 (73%) Query: 18 ELTRFMMIYKFALEEMETKIEILKQEFQMLHDYSPIEHTKSRIKSPESIMNKMLRKNNEL 77 E+ +M Y A++E++TK+EIL EF++ +PIE+ K R+K P+SIM+K+ RK E+ Sbjct: 21 EMQEMIMKYSAAIKEVKTKLEILDNEFKVKRKRNPIEYMKDRVKDPKSIMDKLERKGLEV 80 Query: 78 SLPAIRATIKDIAGLRITCSFISDIYQVSAMLQKQDDLKVLGVKDYIKHPKPNGYQSLHL 137 S + + + DIAG+R+ CSF+SDIY+++ ML+ QDD+K++ KDYIK+PKPNGY+S H+ Sbjct: 81 SFRSAKENLNDIAGIRVVCSFVSDIYEIADMLKNQDDIKLINEKDYIKNPKPNGYRSFHM 140 Query: 138 LVEVPVFLSDCQEHVCVEVQIRTIAMDFWASLEHKIFYKYSQSVPEHLTRELKNAADKAY 197 ++EVP+F SD E V VEVQIRTIAMDFWASLEHK++YK + E + ELK AD Sbjct: 141 ILEVPIFFSDHVEPVRVEVQIRTIAMDFWASLEHKLYYKTLGTDAEIIRCELKECADVIS 200 Query: 198 ELDLQMERLHREIKEI 213 E D++M+ + +E++++ Sbjct: 201 ETDIKMQNIQKEVEKL 216 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.320 0.135 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 16,557,196 Number of extensions: 637331 Number of successful extensions: 1330 Number of sequences better than 1.0e-05: 20 Number of HSP's gapped: 1333 Number of HSP's successfully gapped: 20 Length of query: 247 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 143 Effective length of database: 26,383,695 Effective search space: 3772868385 Effective search space used: 3772868385 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 114 (48.5 bits)