BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0580.0003.p (159 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SA1329 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins 165 3e-41 lin2070 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins 160 9e-40 BS_fur [P] COG0735 Fe2+/Zn2+ uptake regulation proteins 155 2e-38 BH1527 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins 154 4e-38 CAC1682 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins 123 1e-28 >SA1329 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Length = 149 Score = 165 bits (417), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 76/143 (53%), Positives = 97/143 (67%) Query: 6 IANISQQFAAHHYKLTPQREAIVRVLLDNEKDHLSVEEVYMLVKNSYPHLGLATVYRTLE 65 + + QQ YKLTPQREA VRVL++NEKDHLS E+VY+ VK+ P +GLATVYRTLE Sbjct: 5 LNRVKQQLQQSSYKLTPQREATVRVLIENEKDHLSAEDVYLKVKDKAPEIGLATVYRTLE 64 Query: 66 LLCELHIVEKMNFGDGVARYDLRGDDHAHMHHHLICNVCGRLEEIKDDWXXXXXXXXXXX 125 LL EL +V+K+NFGDGVAR+DLR + H HHHL+C CGR++EI +D Sbjct: 65 LLAELKVVDKINFGDGVARFDLRKEGAKHFHHHLVCMECGRVDEIDEDLLPEVENRVENE 124 Query: 126 YGFNVTDHRLDFKGTYNSCKRSG 148 + F + DHRL F G +C+ G Sbjct: 125 FNFKILDHRLTFHGVCETCQAKG 147 >lin2070 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Length = 152 Score = 160 bits (404), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 79/145 (54%), Positives = 96/145 (66%) Query: 6 IANISQQFAAHHYKLTPQREAIVRVLLDNEKDHLSVEEVYMLVKNSYPHLGLATVYRTLE 65 I I Q YKLTPQREA VRVLL+NEKDHLS EEV++ VK+ P GLATVYRTLE Sbjct: 5 IGRIKAQLHDASYKLTPQREATVRVLLENEKDHLSAEEVFLRVKDIAPDTGLATVYRTLE 64 Query: 66 LLCELHIVEKMNFGDGVARYDLRGDDHAHMHHHLICNVCGRLEEIKDDWXXXXXXXXXXX 125 LL EL +V+K+NFGDGV+RYDLR + H HHHL+C CG +EEI++D Sbjct: 65 LLTELRVVDKINFGDGVSRYDLRQEGAKHFHHHLVCLECGSVEEIQEDLLEDVEKIVESK 124 Query: 126 YGFNVTDHRLDFKGTYNSCKRSGCK 150 + F V DHRL F+G C++ K Sbjct: 125 WNFLVKDHRLTFQGICADCRQKSKK 149 >BS_fur [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Length = 149 Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 76/139 (54%), Positives = 95/139 (68%) Query: 6 IANISQQFAAHHYKLTPQREAIVRVLLDNEKDHLSVEEVYMLVKNSYPHLGLATVYRTLE 65 I I +Q + YKLTPQREA VRVLL+NE+DHLS E+VY+LVK P +GLATVYRTLE Sbjct: 5 IDRIKKQLHSSSYKLTPQREATVRVLLENEEDHLSAEDVYLLVKEKSPEIGLATVYRTLE 64 Query: 66 LLCELHIVEKMNFGDGVARYDLRGDDHAHMHHHLICNVCGRLEEIKDDWXXXXXXXXXXX 125 LL EL +V+K+NFGDGV+RYDLR + AH HHHL+C G ++EI+ D Sbjct: 65 LLTELKVVDKINFGDGVSRYDLRKEGAAHFHHHLVCMEFGAVDEIEGDLLEDVEEIIERD 124 Query: 126 YGFNVTDHRLDFKGTYNSC 144 + F + DHRL F G + C Sbjct: 125 WKFKIKDHRLTFHGICHRC 143 >BH1527 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Length = 150 Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 77/149 (51%), Positives = 102/149 (68%), Gaps = 5/149 (3%) Query: 6 IANISQQFAAHHYKLTPQREAIVRVLLDNEKDHLSVEEVYMLVKNSYPHLGLATVYRTLE 65 + I +Q + YKLTPQREA V+VLL++E+DHLS E+VY+LVK P +GLATVYRTLE Sbjct: 5 LDRIKKQLHSQSYKLTPQREATVKVLLEHEEDHLSAEDVYLLVKEKAPEIGLATVYRTLE 64 Query: 66 LLCELHIVEKMNFGDGVARYDLRGDDHAHMHHHLICNVCGRLEEIKDDWXXXXXXXXXXX 125 LL EL +V+K+NFGDGV+RYDLR + H HHHL+C CG ++EI++D Sbjct: 65 LLTELKVVDKINFGDGVSRYDLRQEGADHFHHHLVCIECGAVDEIQEDLLGDVEEIVESE 124 Query: 126 YGFNVTDHRLDFKGTYNSCKRSGCKGEKS 154 + F + DHRL F G C R C+G++S Sbjct: 125 WNFKIKDHRLTFHGI---CHR--CQGDES 148 >CAC1682 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins Length = 151 Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 87/142 (61%) Query: 6 IANISQQFAAHHYKLTPQREAIVRVLLDNEKDHLSVEEVYMLVKNSYPHLGLATVYRTLE 65 I + YKLTPQR A++ +++DNE HL+VEE+Y LVK P +GLATVYRT++ Sbjct: 9 IEKLKNNLKDKGYKLTPQRRAVLDIIIDNEGQHLTVEELYDLVKLECPEIGLATVYRTVQ 68 Query: 66 LLCELHIVEKMNFGDGVARYDLRGDDHAHMHHHLICNVCGRLEEIKDDWXXXXXXXXXXX 125 LL EL ++ K++ DG++RY+L ++ H HHHLIC CG++ E++ D Sbjct: 69 LLDELGVISKLDLNDGLSRYELVHENEPHQHHHLICTACGKVTEVQGDLLDELEDCIENK 128 Query: 126 YGFNVTDHRLDFKGTYNSCKRS 147 Y F + +H + F G + C++ Sbjct: 129 YHFLIKNHSVKFYGICSECRKK 150 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.323 0.138 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 10,438,392 Number of extensions: 343106 Number of successful extensions: 1436 Number of sequences better than 1.0e-05: 376 Number of HSP's gapped: 1064 Number of HSP's successfully gapped: 376 Length of query: 159 Length of database: 38,378,431 Length adjustment: 98 Effective length of query: 61 Effective length of database: 27,075,699 Effective search space: 1651617639 Effective search space used: 1651617639 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 111 (47.4 bits)