BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0571.0033.p
         (122 letters)

Database: COG 
           115,334 sequences; 38,378,431 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Cj0898 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase...    63   9e-11
CAC1287 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolas...    63   1e-10
aq_1418 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins               53   1e-07
aq_141 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase...    53   1e-07
PA0656 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase...    50   6e-07

>Cj0898 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other
           HIT family hydrolases
          Length = 121

 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 5/107 (4%)

Query: 14  MSEDFYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDNE 73
           M E    + +  GK P NKV+E+D  LA++   P  PIHI+ +PK++       QE D E
Sbjct: 1   MQEKTIFELIVEGKLPCNKVLESDDFLAFHDIAPKAPIHILIIPKKYFKD---FQEFDPE 57

Query: 74  TLLELLGVIKQVAAMVTEKYGACRVSTNLGDY--QDSKHLHWHIYFG 118
            + ++   I+++A ++       R+ TN G    Q+  HLH+H+  G
Sbjct: 58  LMAKMTSFIQELAVLLGVDKSGYRLVTNCGKNSGQEVFHLHFHMLGG 104


>CAC1287 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other
           HIT family hydrolases
          Length = 114

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 3/104 (2%)

Query: 14  MSEDFYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDNE 73
           M E  +C ++  G+ P +KV E + VLA+    P  P+H++ +PK+HISSL  + E +++
Sbjct: 1   MDECIFC-KIIKGEIPSSKVYEDEDVLAFNDISPAAPVHVLVIPKKHISSLNDINEENSK 59

Query: 74  TLLELLGVIKQVAAMVTEKYGACRVSTNLGDY--QDSKHLHWHI 115
            +  +  VI ++A  +       RV +N G+   Q   H+H+H+
Sbjct: 60  VIAHVFVVISKLAKELGIDEDGFRVVSNCGEAAGQTVHHVHFHL 103


>aq_1418 [P] COG0735 Fe2+/Zn2+ uptake regulation proteins
          Length = 121

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 16/115 (13%)

Query: 18  FYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDNETLLE 77
            +C ++  G+ P  KV E D VLA++   P  P+HI+ +PK+HI  + TL+  D      
Sbjct: 7   IFC-KIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIPKKHIMGIQTLEPEDE----C 61

Query: 78  LLGVIKQVAAMVTEKYGAC---------RVSTNLGD--YQDSKHLHWHIYFGEPL 121
           L+G +  VA  + E  G           R+  N+G    Q   HLH H+  G  +
Sbjct: 62  LVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREM 116


>aq_141 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other
           HIT family hydrolases
          Length = 121

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 16/115 (13%)

Query: 18  FYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDNETLLE 77
            +C ++  G+ P  KV E D VLA++   P  P+HI+ +PK+HI  + TL+  D      
Sbjct: 7   IFC-KIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIPKKHIMGIQTLEPEDE----C 61

Query: 78  LLGVIKQVAAMVTEKYGAC---------RVSTNLGD--YQDSKHLHWHIYFGEPL 121
           L+G +  VA  + E  G           R+  N+G    Q   HLH H+  G  +
Sbjct: 62  LVGHMFYVARKIAEDLGIAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLIGGREM 116


>PA0656 [FGR] COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other
           HIT family hydrolases
          Length = 112

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 18  FYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDNETLLE 77
            +C ++ +G+ P  K  E + V+A++   P  P+H + +PKRHI +L  L E+D      
Sbjct: 4   LFC-KIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGH 62

Query: 78  LLGVIKQVAAMVTEKYGACRVSTNLGDY--QDSKHLHWHI 115
           +L   +++A     + G  RV  N  D   Q   H+H H+
Sbjct: 63  ILFTAQRLAREQGCEEGF-RVVMNCNDLGGQTVHHIHMHV 101


  Database: COG
    Posted date:  Aug 3, 2010  9:58 AM
  Number of letters in database: 38,378,431
  Number of sequences in database:  115,334
  
Lambda     K      H
   0.322    0.139    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115334
Number of Hits to DB: 9,205,399
Number of extensions: 354678
Number of successful extensions: 521
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 530
Number of HSP's successfully gapped: 10
Length of query: 122
Length of database: 38,378,431
Length adjustment: 88
Effective length of query: 34
Effective length of database: 28,229,039
Effective search space: 959787326
Effective search space used: 959787326
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 109 (46.6 bits)