BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0029.p (254 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc2317 [IQR] COG1028 Dehydrogenases with different specificitie... 189 3e-48 AGl2880 [R] COG4618 ABC-type protease/lipase transport system, A... 154 1e-37 AGl2875 [P] COG1629 Outer membrane receptor proteins, mostly Fe ... 154 1e-37 AGl2827 [R] COG1011 Predicted hydrolase (HAD superfamily) 154 1e-37 AGl2810_2 [E] COG1126 ABC-type polar amino acid transport system... 154 1e-37 >AGc2317 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Length = 218 Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 0/248 (0%), Positives = 0/248 (0%), Gaps = 9/248 (3%) Query: 2 GKLEGKVAFITGGNSGIGLATAKLFVNEGAKVV-ITGRNQDTLNAAVEELGAASALGVQA 60 ++ L+ LG Sbjct: 43 TFSAIPADIDERALDEQLERDGASPEEVALELARAKALAVSALHPEALVLGCD-QTMALG 101 Query: 61 DTTDPASLEQAVAAAVERFG-TLDVVFANAGISGYTPVGGTELSLFEKVLRTNVTGVFFT 119 AA + V N+ ++ L F Sbjct: 102 TRVYHKPKNM-AEAATHLLSLSGKVHRLNSAAVLVHNGKVVWQTVSSAELAVRTLSAEFV 160 Query: 120 VQAAVPHLKEGASVILNSSVLAEAGSPGTSAYAASKGAVSSMARVLVSELAPRGIRVNTI 179 Sbjct: 161 220 Query: 180 SPGATRTPIWGNA-----EGLAAKEAVLTRSVPLKRLGEPEEIAQVAVFLASDAASYVNG 234 Sbjct: 221 280 Query: 235 ADIGVDGG 242 Sbjct: 281 288 >AGl2880 [R] COG4618 ABC-type protease/lipase transport system, ATPase and permease components Length = 249 Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/246 (38%), Positives = 138/246 (56%), Gaps = 6/246 (2%) Query: 3 KLEGKVAFITGGNSGIGLATAKLFVNEGAKVVIT-GRNQDTLNAAVEELGAA--SALGVQ 59 +L+GK+A ITG + G+G A A+ F EGA VV+ ++ A VEE+ A +A+ V+ Sbjct: 4 RLQGKIAVITGASKGLGAAIARSFAAEGASVVVNYSSSKSAAEAVVEEIIDAGGTAIAVK 63 Query: 60 ADTTDPASLEQAVAAAVERFGTLDVVFANAGISGYTPVGGTELSLFEKVLRTNVTGVFFT 119 AD ++PA +E+ AA FG +D++ NAG+ + P+ + LF K + NV G Sbjct: 64 ADMSEPAEVEELFAATNAAFGRVDILVNNAGVYDFQPLENLSIDLFRKHMELNVFGYLLA 123 Query: 120 VQAAVPHLKEGASVILNSSVLAEAGSPGTSAYAASKGAVSSMARVLVSELAPRGIRVNTI 179 ++ AV ++ EG S++ SS + G S Y ASKGA+ + R L +ELAPR IRVN I Sbjct: 124 IKEAVKYMAEGGSIVNMSSTVTIFGPENASVYTASKGAIDGLTRALSNELAPRKIRVNAI 183 Query: 180 SPGATRTPIWGNAEGLAAKE--AVLTRSVPLKRLGEPEEIAQVAVFLASDAASYVNGADI 237 PG T A G + ++ PLKRLG PE+I A+FLASD +S+ G Sbjct: 184 KPGVVDTD-GVQAGGFLHFDFGPMIMAQTPLKRLGVPEDIIPAAIFLASDESSWTTGEFF 242 Query: 238 GVDGGS 243 + GG Sbjct: 243 ILAGGH 248 >AGl2875 [P] COG1629 Outer membrane receptor proteins, mostly Fe transport Length = 249 Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/246 (38%), Positives = 138/246 (56%), Gaps = 6/246 (2%) Query: 3 KLEGKVAFITGGNSGIGLATAKLFVNEGAKVVIT-GRNQDTLNAAVEELGAA--SALGVQ 59 +L+GK+A ITG + G+G A A+ F EGA VV+ ++ A VEE+ A +A+ V+ Sbjct: 4 RLQGKIAVITGASKGLGAAIARSFAAEGASVVVNYSSSKSAAEAVVEEIIDAGGTAIAVK 63 Query: 60 ADTTDPASLEQAVAAAVERFGTLDVVFANAGISGYTPVGGTELSLFEKVLRTNVTGVFFT 119 AD ++PA +E+ AA FG +D++ NAG+ + P+ + LF K + NV G Sbjct: 64 ADMSEPAEVEELFAATNAAFGRVDILVNNAGVYDFQPLENLSIDLFRKHMELNVFGYLLA 123 Query: 120 VQAAVPHLKEGASVILNSSVLAEAGSPGTSAYAASKGAVSSMARVLVSELAPRGIRVNTI 179 ++ AV ++ EG S++ SS + G S Y ASKGA+ + R L +ELAPR IRVN I Sbjct: 124 IKEAVKYMAEGGSIVNMSSTVTIFGPENASVYTASKGAIDGLTRALSNELAPRKIRVNAI 183 Query: 180 SPGATRTPIWGNAEGLAAKE--AVLTRSVPLKRLGEPEEIAQVAVFLASDAASYVNGADI 237 PG T A G + ++ PLKRLG PE+I A+FLASD +S+ G Sbjct: 184 KPGVVDTD-GVQAGGFLHFDFGPMIMAQTPLKRLGVPEDIIPAAIFLASDESSWTTGEFF 242 Query: 238 GVDGGS 243 + GG Sbjct: 243 ILAGGH 248 >AGl2827 [R] COG1011 Predicted hydrolase (HAD superfamily) Length = 249 Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/246 (38%), Positives = 138/246 (56%), Gaps = 6/246 (2%) Query: 3 KLEGKVAFITGGNSGIGLATAKLFVNEGAKVVIT-GRNQDTLNAAVEELGAA--SALGVQ 59 +L+GK+A ITG + G+G A A+ F EGA VV+ ++ A VEE+ A +A+ V+ Sbjct: 4 RLQGKIAVITGASKGLGAAIARSFAAEGASVVVNYSSSKSAAEAVVEEIIDAGGTAIAVK 63 Query: 60 ADTTDPASLEQAVAAAVERFGTLDVVFANAGISGYTPVGGTELSLFEKVLRTNVTGVFFT 119 AD ++PA +E+ AA FG +D++ NAG+ + P+ + LF K + NV G Sbjct: 64 ADMSEPAEVEELFAATNAAFGRVDILVNNAGVYDFQPLENLSIDLFRKHMELNVFGYLLA 123 Query: 120 VQAAVPHLKEGASVILNSSVLAEAGSPGTSAYAASKGAVSSMARVLVSELAPRGIRVNTI 179 ++ AV ++ EG S++ SS + G S Y ASKGA+ + R L +ELAPR IRVN I Sbjct: 124 IKEAVKYMAEGGSIVNMSSTVTIFGPENASVYTASKGAIDGLTRALSNELAPRKIRVNAI 183 Query: 180 SPGATRTPIWGNAEGLAAKE--AVLTRSVPLKRLGEPEEIAQVAVFLASDAASYVNGADI 237 PG T A G + ++ PLKRLG PE+I A+FLASD +S+ G Sbjct: 184 KPGVVDTD-GVQAGGFLHFDFGPMIMAQTPLKRLGVPEDIIPAAIFLASDESSWTTGEFF 242 Query: 238 GVDGGS 243 + GG Sbjct: 243 ILAGGH 248 >AGl2810_2 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Length = 249 Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 95/246 (38%), Positives = 138/246 (56%), Gaps = 6/246 (2%) Query: 3 KLEGKVAFITGGNSGIGLATAKLFVNEGAKVVIT-GRNQDTLNAAVEELGAA--SALGVQ 59 +L+GK+A ITG + G+G A A+ F EGA VV+ ++ A VEE+ A +A+ V+ Sbjct: 4 RLQGKIAVITGASKGLGAAIARSFAAEGASVVVNYSSSKSAAEAVVEEIIDAGGTAIAVK 63 Query: 60 ADTTDPASLEQAVAAAVERFGTLDVVFANAGISGYTPVGGTELSLFEKVLRTNVTGVFFT 119 AD ++PA +E+ AA FG +D++ NAG+ + P+ + LF K + NV G Sbjct: 64 ADMSEPAEVEELFAATNAAFGRVDILVNNAGVYDFQPLENLSIDLFRKHMELNVFGYLLA 123 Query: 120 VQAAVPHLKEGASVILNSSVLAEAGSPGTSAYAASKGAVSSMARVLVSELAPRGIRVNTI 179 ++ AV ++ EG S++ SS + G S Y ASKGA+ + R L +ELAPR IRVN I Sbjct: 124 IKEAVKYMAEGGSIVNMSSTVTIFGPENASVYTASKGAIDGLTRALSNELAPRKIRVNAI 183 Query: 180 SPGATRTPIWGNAEGLAAKE--AVLTRSVPLKRLGEPEEIAQVAVFLASDAASYVNGADI 237 PG T A G + ++ PLKRLG PE+I A+FLASD +S+ G Sbjct: 184 KPGVVDTD-GVQAGGFLHFDFGPMIMAQTPLKRLGVPEDIIPAAIFLASDESSWTTGEFF 242 Query: 238 GVDGGS 243 + GG Sbjct: 243 ILAGGH 248 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.312 0.130 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 18,049,368 Number of extensions: 729168 Number of successful extensions: 2951 Number of sequences better than 1.0e-05: 379 Number of HSP's gapped: 2254 Number of HSP's successfully gapped: 379 Length of query: 254 Length of database: 38,378,431 Length adjustment: 104 Effective length of query: 150 Effective length of database: 26,383,695 Effective search space: 3957554250 Effective search space used: 3957554250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 114 (48.5 bits)