BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0007.p (180 letters) Database: COG 115,334 sequences; 38,378,431 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC0963 [V] COG1968 Uncharacterized bacitracin resistance protein 84 8e-17 AGc5051 [J] COG1670 Acetyltransferases, including N-acetylases o... 59 4e-09 AGc505 [V] COG1968 Uncharacterized bacitracin resistance protein 59 4e-09 mll4634 [V] COG1968 Uncharacterized bacitracin resistance protein 57 1e-08 CAC0501 [V] COG1968 Uncharacterized bacitracin resistance protein 57 1e-08 >CAC0963 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 307 Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 69/144 (47%), Gaps = 1/144 (0%) Query: 15 FKDIIKSRLFGPTPVLIGLVAGGLLMILAA-RSRKTNTADTIDGINYKQAFGIGLFQCLA 73 F+ I LF P PV L+ G + MI A + RK ++D I KQA IG FQCLA Sbjct: 137 FQKKIDKLLFFPAPVAAALMVGAVWMIFAENKYRKRAKIKSVDEITIKQAIVIGCFQCLA 196 Query: 74 LWPGFSRXXXXXXXXXXXXXXQKAAADFTFLISVPVMFGAXXXXXXXXXXXXXXXXXXXM 133 LWPG SR A A+F+F +++P+M GA + Sbjct: 197 LWPGMSRSASTIIGAWIVGVATVAGAEFSFFLAIPMMLGASLLFLIKNSVVLSSVQILGL 256 Query: 134 LIGFTTSFLVAMIAVVTFIKLIKR 157 +GF +F+VA++ V FI +K+ Sbjct: 257 AVGFIVAFIVALVVVDRFISFLKK 280 >AGc5051 [J] COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins Length = 194 Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 0/146 (0%), Positives = 0/146 (0%), Gaps = 7/146 (4%) Query: 16 KDIIKSRLFGPTPVLIG--LVAGGLLMILAARSRKTNTADTIDGINYKQ--AFGIGLFQC 71 D L P+L + S + Sbjct: 101 IDDRAFALL-DIPLLFETGAEGRVD--KVVVVSCAPEIQRERVLSRPGMTEEKFEMILAR 157 Query: 72 LALWPGFSRXXXXXXXXXXXXXXQKAAADFTFLISVPVMFGAXXXXXXXXXXXXXXXXXX 131 Sbjct: 158 217 Query: 132 XMLIGFTTSFLVAMIAVVTFIKLIKR 157 Sbjct: 218 243 >AGc505 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 133 Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 0/146 (0%), Positives = 0/146 (0%), Gaps = 7/146 (4%) Query: 16 KDIIKSRLFGPTPVLIG--LVAGGLLMILAARSRKTNTADTIDGINYKQ--AFGIGLFQC 71 + + Sbjct: 101 GVRSEDNMD-KALQDASDAGRKYIN-- 157 Query: 72 LALWPGFSRXXXXXXXXXXXXXXQKAAADFTFLISVPVMFGAXXXXXXXXXXXXXXXXXX 131 Sbjct: 158 217 Query: 132 XMLIGFTTSFLVAMIAVVTFIKLIKR 157 Sbjct: 218 243 >mll4634 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 268 Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 1/143 (0%) Query: 16 KDIIKSRLF-GPTPVLIGLVAGGLLMILAARSRKTNTADTIDGINYKQAFGIGLFQCLAL 74 D IK+ LF P + L+ GG++++ R ++ + IGLFQCL+L Sbjct: 101 HDFIKTVLFESPRLICTMLIIGGVILLAVDRMNLKPVYRDVERFPTRLYLQIGLFQCLSL 160 Query: 75 WPGFSRXXXXXXXXXXXXXXQKAAADFTFLISVPVMFGAXXXXXXXXXXXXXXXXXXXML 134 PG SR ++AAA+F+F +++P M GA + Sbjct: 161 IPGTSRSGSTIVGALLLGVDKRAAAEFSFFLAIPTMVGAFAFDLFKNRNVLTSADLPIIA 220 Query: 135 IGFTTSFLVAMIAVVTFIKLIKR 157 IGF +F+ A+ V + + R Sbjct: 221 IGFVAAFVTALFVVRYLLDYVSR 243 >CAC0501 [V] COG1968 Uncharacterized bacitracin resistance protein Length = 274 Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 3/146 (2%) Query: 15 FKDIIKSRLFGPTPVLIGLVAGGLLMILAARSRKTNTA--DTIDGINYKQAFGIGLFQCL 72 F D I + + V I L++ G+L I+ K +I I Y A IG+FQ + Sbjct: 105 FDDKIDALFYNYQTVSITLISFGILFIMIENHNKGKHPRITSISEITYTTAVLIGIFQLI 164 Query: 73 A-LWPGFSRXXXXXXXXXXXXXXQKAAADFTFLISVPVMFGAXXXXXXXXXXXXXXXXXX 131 A ++PG SR + AA++TF +++PVMFGA Sbjct: 165 AAVFPGTSRSGATIVGALLIGVSRTVAAEYTFFLAIPVMFGASLLKLFKFGLHFTSTEIT 224 Query: 132 XMLIGFTTSFLVAMIAVVTFIKLIKR 157 + IG ++F+V+++A+ + IKR Sbjct: 225 ILFIGMLSAFIVSILAIKFLMIYIKR 250 Database: COG Posted date: Aug 3, 2010 9:58 AM Number of letters in database: 38,378,431 Number of sequences in database: 115,334 Lambda K H 0.333 0.146 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 115334 Number of Hits to DB: 7,758,044 Number of extensions: 203056 Number of successful extensions: 1279 Number of sequences better than 1.0e-05: 5 Number of HSP's gapped: 1277 Number of HSP's successfully gapped: 5 Length of query: 180 Length of database: 38,378,431 Length adjustment: 100 Effective length of query: 80 Effective length of database: 26,845,031 Effective search space: 2147602480 Effective search space used: 2147602480 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.5 bits) S2: 112 (47.8 bits)